| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077075
Identifier: 170077075
GI number: 170077075
Start: 477945
End: 478550
Strand: Direct
Name: 170077075
Synonym: SYNPCC7002_A0449
Alternate gene names: NA
Gene position: 477945-478550 (Clockwise)
Preceding gene: 170077073
Following gene: 170077076
Centisome position: 15.89
GC content: 44.39
Gene sequence:
>606_bases ATGGTTGCCCTCACTTCAGATCAGTACCTCAGTCCCGAAGAATATTTAGAGTTAGAGAAACATAGCGACATTAAGCATGA ATATATGCATGGAGAAGCTTATGCTATGGCTGGGGCAACCCGCGCCCACAATACCGTGAGCTTAAACTTGGCGATCGCCT GCCGTAACCATTTAGGCGATTCCCCTTGCCGTACCTATATGGCTGATGTGAAAGTGCGTTTATCAGCAGGAAAAAAGTTT TTCTATCCAGATCTGGTTGTCAGTTGTGATGATGACGATGATTTGAGTTTGTCCTATGTGACCCAACCTAAAGTCATTGT TGAAGTATTGTCAGAATCGACAGAAGGTTTTGACCGGGGAGATAAGTTTAAGTTTTACCGCACCATTCCCAGCTTGCAGG AATACATTTTAGTCAGCACCACCCAATATTCCGTGGACTGTTTTCGGCGCAGCGAAGGGAAGCTCTGGATTCTCGAAAGT TACCAGAGCCAAGACGCAGTTCTCAAGGTGCAATCGTTAGAGTTAGATATTTCCTTGGCTGATATCTATGCCACTGTGAC CTTTCCTGAAACAGATCCTAATTTAGATGCAGATTTCAGCGAATAA
Upstream 100 bases:
>100_bases AGCTGACCTGGATCAAATCGCGAATCATTCCCCTTAGGGATGCCACTCCGTAAATTCTTGGCAAAATGGAAGGGAATGTC ACCTAATTGTTGAAAACATC
Downstream 100 bases:
>100_bases ATCAGTAAATAGAGGCCTTATCCTCACCCCAGGTTTTTAAACCAGACACCATTGATACCAATCCCTGATAAAAGCGGCCC CATAGTGGTCAGGACAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MVALTSDQYLSPEEYLELEKHSDIKHEYMHGEAYAMAGATRAHNTVSLNLAIACRNHLGDSPCRTYMADVKVRLSAGKKF FYPDLVVSCDDDDDLSLSYVTQPKVIVEVLSESTEGFDRGDKFKFYRTIPSLQEYILVSTTQYSVDCFRRSEGKLWILES YQSQDAVLKVQSLELDISLADIYATVTFPETDPNLDADFSE
Sequences:
>Translated_201_residues MVALTSDQYLSPEEYLELEKHSDIKHEYMHGEAYAMAGATRAHNTVSLNLAIACRNHLGDSPCRTYMADVKVRLSAGKKF FYPDLVVSCDDDDDLSLSYVTQPKVIVEVLSESTEGFDRGDKFKFYRTIPSLQEYILVSTTQYSVDCFRRSEGKLWILES YQSQDAVLKVQSLELDISLADIYATVTFPETDPNLDADFSE >Mature_201_residues MVALTSDQYLSPEEYLELEKHSDIKHEYMHGEAYAMAGATRAHNTVSLNLAIACRNHLGDSPCRTYMADVKVRLSAGKKF FYPDLVVSCDDDDDLSLSYVTQPKVIVEVLSESTEGFDRGDKFKFYRTIPSLQEYILVSTTQYSVDCFRRSEGKLWILES YQSQDAVLKVQSLELDISLADIYATVTFPETDPNLDADFSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To Synechocystis PCC 6803 sll1609 and sll0925 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008538 - InterPro: IPR012296 - InterPro: IPR011335 [H]
Pfam domain/function: PF05685 DUF820 [H]
EC number: NA
Molecular weight: Translated: 22769; Mature: 22769
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVALTSDQYLSPEEYLELEKHSDIKHEYMHGEAYAMAGATRAHNTVSLNLAIACRNHLGD CEEECCCCCCCHHHHHHHHHCCCCCHHHHCCCEEEECCCCCCCCEEEEEEEEEEECCCCC SPCRTYMADVKVRLSAGKKFFYPDLVVSCDDDDDLSLSYVTQPKVIVEVLSESTEGFDRG CHHHHHHHHEEEEEECCCEEECCCEEEECCCCCCCEEEEECCCHHHHHHHHHCCCCCCCC DKFKFYRTIPSLQEYILVSTTQYSVDCFRRSEGKLWILESYQSQDAVLKVQSLELDISLA CCEEEEECCCCHHEEEEEECCEEEEEEEECCCCCEEEEECCCCCCEEEEEEEEEEEEEEE DIYATVTFPETDPNLDADFSE EEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MVALTSDQYLSPEEYLELEKHSDIKHEYMHGEAYAMAGATRAHNTVSLNLAIACRNHLGD CEEECCCCCCCHHHHHHHHHCCCCCHHHHCCCEEEECCCCCCCCEEEEEEEEEEECCCCC SPCRTYMADVKVRLSAGKKFFYPDLVVSCDDDDDLSLSYVTQPKVIVEVLSESTEGFDRG CHHHHHHHHEEEEEECCCEEECCCEEEECCCCCCCEEEEECCCHHHHHHHHHCCCCCCCC DKFKFYRTIPSLQEYILVSTTQYSVDCFRRSEGKLWILESYQSQDAVLKVQSLELDISLA CCEEEEECCCCHHEEEEEECCEEEEEEEECCCCCEEEEECCCCCCEEEEEEEEEEEEEEE DIYATVTFPETDPNLDADFSE EEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]