| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is pheT [H]
Identifier: 170077073
GI number: 170077073
Start: 473833
End: 476262
Strand: Direct
Name: pheT [H]
Synonym: SYNPCC7002_A0447
Alternate gene names: 170077073
Gene position: 473833-476262 (Clockwise)
Preceding gene: 170077071
Following gene: 170077075
Centisome position: 15.75
GC content: 52.51
Gene sequence:
>2430_bases ATGCGGATTTCCCTGAATTGGTTAAAAGAATTTGTTGAGATCACCCTATCGCCAGAAGAATTAGCCAAAACCCTAACCAT TGCTGGGTTTGAAGTAGAAGAAATCGAAGATCGCCGCCGCCTGGCCAATGGTGTCGTTGTTGGTAAAGTTGTAAGCCGCG AACCCCATCCCGACGCCGACAAACTGAGCGTCTGTCAAGTCGATATTGGTGCAGACGAACTTTCAACCATTGTCTGTGGG GCGAAAAATGTCCGGGCCGATATCTTTGTCCCCGTCGCTACCCTAGGCACCTACTTACCCACCATTGACCTCAAACTAAA ACCCACCAAACTCCGGGGTGTAAAATCCTCCGGGATGATTTGCTCCCTCTCCGAATTGGGCTTAGAAAAAGACTCCGAAG GCATTCACATTTTTGAACAACCAGACCTAAAGCCGGGGATGGACGTGCGCCCCCTCCTCGGCTTAGATGATGTGGTATTG GATTTAACCGCCACCGCTAACCGAGCCGATGCCCTCAGTATGGTTGGCGTCGCGCGGGAAGTGGCAGCTCTCACTGGCGT AGATGTCAAACTCCCAGAAATTCCGGCCATGGATACCGCCCCGGAAACGTTGACCATCACCGTGGCCGATCCTGTCGCCT GTCCCGCCTATCTCGGTACGGTGATCGAAGGTGTGACGACAGCGCCTTCTCCTGATTGGTTAAAATTCCGGCTCCAAGCG GCTGGCACCCGCCCGATTAATAATGTTGTTGATATCACCAACTATGTGCTCCTCGAATGGGGACAGCCCCTCCATGCCTT TGACCGGGAGCGTCTTGCCCAGGTGGCAGGATCTGAAACCGTTGCCCTTGGGGTGCGGTTTGCCAAAGCCGGGGAAATGT TAACGACCCTCGATGGTCAAGAGCGCAAGCTAGCTGAGAAAAATTTGGTAATTACCGCCAATGATGTCCCTGTTGCTTTG GCGGGGGTAATGGGTGGTGAAAGTACGGAAGTTCACAATGGCACCCAGAATATTGTTTTAGAAGCAGCCCTATTTGAACC CGTCACCATCCGACGGTCTTCCCGTGCCGTTGGTTTGTGGAGTGAATCTTCGACTCGCTATGAACGGGGTGTCAACCAAG TGGAATTAGACCGGGCGGCCCAACGGGCGATCGCCCTCCTCCAAGAACTCACCGGGGGAACTGTGGTTCAGCGTGGTCTC ACGGATACCCGACCCGATCCCAATGCCCGACCTAAAATTCCTCTGCGTTTACAACGGCTCCACGAAGTCCTCGGCCATGT CCATAAGGACGGCAAAATTTTTGACGTGCCCCTCGCCGATGTGGAACGCATTTTGGCGGATCTCGGCTGTACCCTCGAAT CCACAGGAGAAGGGGTCTGGGAAGTGGCTGTGCCCCCCTACCGTTATCGCGATTTAGAACGCGAAATTGACCTTATCGAA GAAGTGGCCCGTCTCTATGGCTATGACAATTTCTGCGATACTTTACCGAGTCAATCCGCCGCTGGTTTTTTGTCTCCAGC CGAAAAAGTAAATCGTCAATTGCGGGGCAGCTTCCGGGCGATTGGCCTGACCGAAGTGGTGCATTACTCCTTGGTTAAGC CAGAACTTGCTGACATCAAACTCAGTAACCCCCTGTTTGTGGAATATTCTGCCTTACGAAAGGAGTTGCTCACAGGGTTA ATTGATGCCTTTGCCTACAACCAATCCCAAGGCAATGGTGCCCTCAATGCCTTTGAACTGGGTCGCGTTTTTTGGCTAGA CGACAACGAAAACTATGCCGAAGCTGATTATCTGGCTGGAATTTTAGGGGGCAATCTCAATCCCGATGGCAGTTGGGCTG TTGGTGGCAAAGGTCAACCAATGTCTTGGTATGAAGCGAAGGGATTCCTTGATGCCGCCTTCCGGCAACTGGGCTTGGAG GTGAGCTATCGGGCAGATACCAGCAACGAAAAATTGCATCCCGGTCGGACAGCGTCTCTCTGGCTTCAGGGTCGTCAACT GGGGATTTTTGGACAACTCCACCCCCAACTACGTCAGGAAAAAGATTTGATCGATGCGGTGTATGTTTTTGAGCTGAAAC TTGATCTGCTGCAAACGGTGTTGAGTCGTCCATCCCAACAGGTACCCATTTTTAAGGCCTTTTCTACTTACCCCGCAGTC ACCCGCGATTTGGCGTTCTTTGCCCCCCTCGAAACGTCTGTAGCCGACCTGGAGCAGGCCATGCAGAAAACAGCAAAAAA ACTGTTGGCTGGGGTGGAGTTATTTGATGAATATCGCGGTGAGCACGCCCCTGAAGGCCAGCGCAGTTTGGCTTTTAGTT TGCAGTATCGAGCTGCGGATAAAACCCTAACGGACGAGGAGATTGATCCAGTCCACCAAAAGGTGCGGGATGCGCTGGTT AAACAGTTTGCCGTGACCCTCAGAAGCTAA
Upstream 100 bases:
>100_bases GATATCATCTATGGCGATCGCCCCCAATATTTTCCCCGGTAAGGGGAGGGAAACGTTTAAAATAAACTCCTTGAAACTAA TGTAATGCCCCAAAAAGTCA
Downstream 100 bases:
>100_bases CCCTCTTTGCCTCGCGGCATCTCCCCTCAGGGGAGAATTCCGTTAGCGGCGAGCAACACCATCTTGGCGGGCGGCTTGAC CGACGGCGGCGGCGACGGCG
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 809; Mature: 809
Protein sequence:
>809_residues MRISLNWLKEFVEITLSPEELAKTLTIAGFEVEEIEDRRRLANGVVVGKVVSREPHPDADKLSVCQVDIGADELSTIVCG AKNVRADIFVPVATLGTYLPTIDLKLKPTKLRGVKSSGMICSLSELGLEKDSEGIHIFEQPDLKPGMDVRPLLGLDDVVL DLTATANRADALSMVGVAREVAALTGVDVKLPEIPAMDTAPETLTITVADPVACPAYLGTVIEGVTTAPSPDWLKFRLQA AGTRPINNVVDITNYVLLEWGQPLHAFDRERLAQVAGSETVALGVRFAKAGEMLTTLDGQERKLAEKNLVITANDVPVAL AGVMGGESTEVHNGTQNIVLEAALFEPVTIRRSSRAVGLWSESSTRYERGVNQVELDRAAQRAIALLQELTGGTVVQRGL TDTRPDPNARPKIPLRLQRLHEVLGHVHKDGKIFDVPLADVERILADLGCTLESTGEGVWEVAVPPYRYRDLEREIDLIE EVARLYGYDNFCDTLPSQSAAGFLSPAEKVNRQLRGSFRAIGLTEVVHYSLVKPELADIKLSNPLFVEYSALRKELLTGL IDAFAYNQSQGNGALNAFELGRVFWLDDNENYAEADYLAGILGGNLNPDGSWAVGGKGQPMSWYEAKGFLDAAFRQLGLE VSYRADTSNEKLHPGRTASLWLQGRQLGIFGQLHPQLRQEKDLIDAVYVFELKLDLLQTVLSRPSQQVPIFKAFSTYPAV TRDLAFFAPLETSVADLEQAMQKTAKKLLAGVELFDEYRGEHAPEGQRSLAFSLQYRAADKTLTDEEIDPVHQKVRDALV KQFAVTLRS
Sequences:
>Translated_809_residues MRISLNWLKEFVEITLSPEELAKTLTIAGFEVEEIEDRRRLANGVVVGKVVSREPHPDADKLSVCQVDIGADELSTIVCG AKNVRADIFVPVATLGTYLPTIDLKLKPTKLRGVKSSGMICSLSELGLEKDSEGIHIFEQPDLKPGMDVRPLLGLDDVVL DLTATANRADALSMVGVAREVAALTGVDVKLPEIPAMDTAPETLTITVADPVACPAYLGTVIEGVTTAPSPDWLKFRLQA AGTRPINNVVDITNYVLLEWGQPLHAFDRERLAQVAGSETVALGVRFAKAGEMLTTLDGQERKLAEKNLVITANDVPVAL AGVMGGESTEVHNGTQNIVLEAALFEPVTIRRSSRAVGLWSESSTRYERGVNQVELDRAAQRAIALLQELTGGTVVQRGL TDTRPDPNARPKIPLRLQRLHEVLGHVHKDGKIFDVPLADVERILADLGCTLESTGEGVWEVAVPPYRYRDLEREIDLIE EVARLYGYDNFCDTLPSQSAAGFLSPAEKVNRQLRGSFRAIGLTEVVHYSLVKPELADIKLSNPLFVEYSALRKELLTGL IDAFAYNQSQGNGALNAFELGRVFWLDDNENYAEADYLAGILGGNLNPDGSWAVGGKGQPMSWYEAKGFLDAAFRQLGLE VSYRADTSNEKLHPGRTASLWLQGRQLGIFGQLHPQLRQEKDLIDAVYVFELKLDLLQTVLSRPSQQVPIFKAFSTYPAV TRDLAFFAPLETSVADLEQAMQKTAKKLLAGVELFDEYRGEHAPEGQRSLAFSLQYRAADKTLTDEEIDPVHQKVRDALV KQFAVTLRS >Mature_809_residues MRISLNWLKEFVEITLSPEELAKTLTIAGFEVEEIEDRRRLANGVVVGKVVSREPHPDADKLSVCQVDIGADELSTIVCG AKNVRADIFVPVATLGTYLPTIDLKLKPTKLRGVKSSGMICSLSELGLEKDSEGIHIFEQPDLKPGMDVRPLLGLDDVVL DLTATANRADALSMVGVAREVAALTGVDVKLPEIPAMDTAPETLTITVADPVACPAYLGTVIEGVTTAPSPDWLKFRLQA AGTRPINNVVDITNYVLLEWGQPLHAFDRERLAQVAGSETVALGVRFAKAGEMLTTLDGQERKLAEKNLVITANDVPVAL AGVMGGESTEVHNGTQNIVLEAALFEPVTIRRSSRAVGLWSESSTRYERGVNQVELDRAAQRAIALLQELTGGTVVQRGL TDTRPDPNARPKIPLRLQRLHEVLGHVHKDGKIFDVPLADVERILADLGCTLESTGEGVWEVAVPPYRYRDLEREIDLIE EVARLYGYDNFCDTLPSQSAAGFLSPAEKVNRQLRGSFRAIGLTEVVHYSLVKPELADIKLSNPLFVEYSALRKELLTGL IDAFAYNQSQGNGALNAFELGRVFWLDDNENYAEADYLAGILGGNLNPDGSWAVGGKGQPMSWYEAKGFLDAAFRQLGLE VSYRADTSNEKLHPGRTASLWLQGRQLGIFGQLHPQLRQEKDLIDAVYVFELKLDLLQTVLSRPSQQVPIFKAFSTYPAV TRDLAFFAPLETSVADLEQAMQKTAKKLLAGVELFDEYRGEHAPEGQRSLAFSLQYRAADKTLTDEEIDPVHQKVRDALV KQFAVTLRS
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788006, Length=828, Percent_Identity=38.6473429951691, Blast_Score=472, Evalue=1e-134,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 88793; Mature: 88793
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISLNWLKEFVEITLSPEELAKTLTIAGFEVEEIEDRRRLANGVVVGKVVSREPHPDAD CEEEHHHHHHHHHEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEHHHCCCCCCCCC KLSVCQVDIGADELSTIVCGAKNVRADIFVPVATLGTYLPTIDLKLKPTKLRGVKSSGMI CEEEEEEECCHHHHHHHHCCCCCCCEEEEEEHHHHHHHCCEEEEEECCHHHCCCCCCCCE CSLSELGLEKDSEGIHIFEQPDLKPGMDVRPLLGLDDVVLDLTATANRADALSMVGVARE EEHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHH VAALTGVDVKLPEIPAMDTAPETLTITVADPVACPAYLGTVIEGVTTAPSPDWLKFRLQA HHHHCCCCEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEC AGTRPINNVVDITNYVLLEWGQPLHAFDRERLAQVAGSETVALGVRFAKAGEMLTTLDGQ CCCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEHHCCCCHHHCCCC ERKLAEKNLVITANDVPVALAGVMGGESTEVHNGTQNIVLEAALFEPVTIRRSSRAVGLW HHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCHHEEEEEECCCCEEEECCCCEEEEE SESSTRYERGVNQVELDRAAQRAIALLQELTGGTVVQRGLTDTRPDPNARPKIPLRLQRL CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHH HEVLGHVHKDGKIFDVPLADVERILADLGCTLESTGEGVWEVAVPPYRYRDLEREIDLIE HHHHHHHCCCCCEEECCHHHHHHHHHHHCCCEECCCCCEEEECCCCHHHHHHHHHHHHHH EVARLYGYDNFCDTLPSQSAAGFLSPAEKVNRQLRGSFRAIGLTEVVHYSLVKPELADIK HHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHCHHHHHHHHHHCCCCHHCEE LSNPLFVEYSALRKELLTGLIDAFAYNQSQGNGALNAFELGRVFWLDDNENYAEADYLAG ECCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCCCCCHHHHHHH ILGGNLNPDGSWAVGGKGQPMSWYEAKGFLDAAFRQLGLEVSYRADTSNEKLHPGRTASL HHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEE WLQGRQLGIFGQLHPQLRQEKDLIDAVYVFELKLDLLQTVLSRPSQQVPIFKAFSTYPAV EEECCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHH TRDLAFFAPLETSVADLEQAMQKTAKKLLAGVELFDEYRGEHAPEGQRSLAFSLQYRAAD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCC KTLTDEEIDPVHQKVRDALVKQFAVTLRS CCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRISLNWLKEFVEITLSPEELAKTLTIAGFEVEEIEDRRRLANGVVVGKVVSREPHPDAD CEEEHHHHHHHHHEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEHHHCCCCCCCCC KLSVCQVDIGADELSTIVCGAKNVRADIFVPVATLGTYLPTIDLKLKPTKLRGVKSSGMI CEEEEEEECCHHHHHHHHCCCCCCCEEEEEEHHHHHHHCCEEEEEECCHHHCCCCCCCCE CSLSELGLEKDSEGIHIFEQPDLKPGMDVRPLLGLDDVVLDLTATANRADALSMVGVARE EEHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHH VAALTGVDVKLPEIPAMDTAPETLTITVADPVACPAYLGTVIEGVTTAPSPDWLKFRLQA HHHHCCCCEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEC AGTRPINNVVDITNYVLLEWGQPLHAFDRERLAQVAGSETVALGVRFAKAGEMLTTLDGQ CCCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEHHCCCCHHHCCCC ERKLAEKNLVITANDVPVALAGVMGGESTEVHNGTQNIVLEAALFEPVTIRRSSRAVGLW HHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCHHEEEEEECCCCEEEECCCCEEEEE SESSTRYERGVNQVELDRAAQRAIALLQELTGGTVVQRGLTDTRPDPNARPKIPLRLQRL CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHH HEVLGHVHKDGKIFDVPLADVERILADLGCTLESTGEGVWEVAVPPYRYRDLEREIDLIE HHHHHHHCCCCCEEECCHHHHHHHHHHHCCCEECCCCCEEEECCCCHHHHHHHHHHHHHH EVARLYGYDNFCDTLPSQSAAGFLSPAEKVNRQLRGSFRAIGLTEVVHYSLVKPELADIK HHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHCHHHHHHHHHHCCCCHHCEE LSNPLFVEYSALRKELLTGLIDAFAYNQSQGNGALNAFELGRVFWLDDNENYAEADYLAG ECCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCCCCCHHHHHHH ILGGNLNPDGSWAVGGKGQPMSWYEAKGFLDAAFRQLGLEVSYRADTSNEKLHPGRTASL HHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEE WLQGRQLGIFGQLHPQLRQEKDLIDAVYVFELKLDLLQTVLSRPSQQVPIFKAFSTYPAV EEECCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHH TRDLAFFAPLETSVADLEQAMQKTAKKLLAGVELFDEYRGEHAPEGQRSLAFSLQYRAAD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCC KTLTDEEIDPVHQKVRDALVKQFAVTLRS CCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA