| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170077030
Identifier: 170077030
GI number: 170077030
Start: 425165
End: 425596
Strand: Direct
Name: 170077030
Synonym: SYNPCC7002_A0402
Alternate gene names: NA
Gene position: 425165-425596 (Clockwise)
Preceding gene: 170077020
Following gene: 170077034
Centisome position: 14.13
GC content: 49.07
Gene sequence:
>432_bases ATGGGAAATTCCCAGATCTGGATCAATTTTCTGGCGTTACTGCCTTCAAGCGTTTTAACAATTCTATTGATTGCGATCGC CTTTTTGAGGTTCTATGACCAAACCGACTTTGAATTCCTCGGACTCATCGCCAACCCCAGACAGTGGAGCAATGGACTCA CCGTGGCAGCCGTCGTGGCTACATTGGCTAATTTCGGCGTTGAGTGGAACCGTCGAAATCGAGAAACAAACCGCCTGGCT GAAGAAGCACAACGAAGAGCTGAGGAGGGGCAACAAAGAGCTGAAGCAAGAGAACGCCAAATTGCGCGAGCTCAAATCGA AACTCGATGCCGTCTTGCGGAACTCCGCTACCAACTCGACCCAAGCGAAGCCAACCGACAAATCTTGATTAACACCTTGG CTGTTTTGGAAGAGTATGGAGAGATGTTTTAG
Upstream 100 bases:
>100_bases AAACCGTTCAAAGGTTTCAAGGAGATTGGCGATCGCCACTTGGCTCATGATGAATATCAAAAATTTGGGACAATATCCCC AGACTATAATGGATTTGTGT
Downstream 100 bases:
>100_bases AGCGAGACAGAAGTAACCCGGAGAAAATGCTAAGTCTTCCCCCGCAAAAGTCGCTGATAAATATCCATTGTTTGTTGGTA ATTGATTTCAGGGGTGTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MGNSQIWINFLALLPSSVLTILLIAIAFLRFYDQTDFEFLGLIANPRQWSNGLTVAAVVATLANFGVEWNRRNRETNRLA EEAQRRAEEGQQRAEARERQIARAQIETRCRLAELRYQLDPSEANRQILINTLAVLEEYGEMF
Sequences:
>Translated_143_residues MGNSQIWINFLALLPSSVLTILLIAIAFLRFYDQTDFEFLGLIANPRQWSNGLTVAAVVATLANFGVEWNRRNRETNRLA EEAQRRAEEGQQRAEARERQIARAQIETRCRLAELRYQLDPSEANRQILINTLAVLEEYGEMF >Mature_142_residues GNSQIWINFLALLPSSVLTILLIAIAFLRFYDQTDFEFLGLIANPRQWSNGLTVAAVVATLANFGVEWNRRNRETNRLAE EAQRRAEEGQQRAEARERQIARAQIETRCRLAELRYQLDPSEANRQILINTLAVLEEYGEMF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16485; Mature: 16354
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNSQIWINFLALLPSSVLTILLIAIAFLRFYDQTDFEFLGLIANPRQWSNGLTVAAVVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHCCCHHHHHHHH TLANFGVEWNRRNRETNRLAEEAQRRAEEGQQRAEARERQIARAQIETRCRLAELRYQLD HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSEANRQILINTLAVLEEYGEMF CCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GNSQIWINFLALLPSSVLTILLIAIAFLRFYDQTDFEFLGLIANPRQWSNGLTVAAVVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHCCCHHHHHHHH TLANFGVEWNRRNRETNRLAEEAQRRAEEGQQRAEARERQIARAQIETRCRLAELRYQLD HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSEANRQILINTLAVLEEYGEMF CCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA