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The map label for this gene is ssb [H]

Identifier: 170076752

GI number: 170076752

Start: 119567

End: 119926

Strand: Direct

Name: ssb [H]

Synonym: SYNPCC7002_A0119

Alternate gene names: 170076752

Gene position: 119567-119926 (Clockwise)

Preceding gene: 170076750

Following gene: 170076756

Centisome position: 3.97

GC content: 46.67

Gene sequence:

>360_bases
ATGACCATTAACCTCGTAAATCTTGTGGGCCGGGCCGGTGGGGATCCGGAAGTGCGCTATTTCGAGTCGGGTAGTGTGCT
GTGTAATTTGACTTTAGCGGTAAATCGTCCCACCAGCCGGACAGATCAGCCGGATTGGTTTAATTTAGAGATTTGGGGAA
AAACAGCAGAAATCGCCGCTAATTATGTAAAAAAAGGCAGTCTGCTCGGTATCCAAGGCACTTTAAAGATCGAGACTTTC
ACGAATCGCAATGGCCACGAATCGTCTAAGCCAGTAATTCGGGTTAATCGTCTAGATTTGCTGGGTTCTAAGCGGGATGT
GGATCCCAATGCGGTAGATAATTATAACAACTACGGGTAA

Upstream 100 bases:

>100_bases
ATTGAGTAGGTAAATCACTCACACCTTACAAAACTTCACAACAAATTGCCATGGGAACTTGTGGCACAATAAAGCAGAAC
AGTTGTATGGAAAGTCAACG

Downstream 100 bases:

>100_bases
ACACCCTCCGCCTGCGGCACTTTCCTTAAGGGACGCCCCTCTAACTCCTCTCAATGGAGGCACCCCTCTAACTCCCCTCA
AGGGGAGAATTGCACCCTGC

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MTINLVNLVGRAGGDPEVRYFESGSVLCNLTLAVNRPTSRTDQPDWFNLEIWGKTAEIAANYVKKGSLLGIQGTLKIETF
TNRNGHESSKPVIRVNRLDLLGSKRDVDPNAVDNYNNYG

Sequences:

>Translated_119_residues
MTINLVNLVGRAGGDPEVRYFESGSVLCNLTLAVNRPTSRTDQPDWFNLEIWGKTAEIAANYVKKGSLLGIQGTLKIETF
TNRNGHESSKPVIRVNRLDLLGSKRDVDPNAVDNYNNYG
>Mature_118_residues
TINLVNLVGRAGGDPEVRYFESGSVLCNLTLAVNRPTSRTDQPDWFNLEIWGKTAEIAANYVKKGSLLGIQGTLKIETFT
NRNGHESSKPVIRVNRLDLLGSKRDVDPNAVDNYNNYG

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=112, Percent_Identity=33.0357142857143, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 13181; Mature: 13050

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINLVNLVGRAGGDPEVRYFESGSVLCNLTLAVNRPTSRTDQPDWFNLEIWGKTAEIAA
CEEEEEEEECCCCCCCCEEEEECCCEEEEEEEEEECCCCCCCCCCEEEEEEECCHHHHHH
NYVKKGSLLGIQGTLKIETFTNRNGHESSKPVIRVNRLDLLGSKRDVDPNAVDNYNNYG
HHHCCCCEEECCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TINLVNLVGRAGGDPEVRYFESGSVLCNLTLAVNRPTSRTDQPDWFNLEIWGKTAEIAA
EEEEEEEECCCCCCCCEEEEECCCEEEEEEEEEECCCCCCCCCCEEEEEEECCHHHHHH
NYVKKGSLLGIQGTLKIETFTNRNGHESSKPVIRVNRLDLLGSKRDVDPNAVDNYNNYG
HHHCCCCEEECCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12240834 [H]