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The map label for this gene is pilH [H]

Identifier: 170076681

GI number: 170076681

Start: 50845

End: 51207

Strand: Direct

Name: pilH [H]

Synonym: SYNPCC7002_A0046

Alternate gene names: 170076681

Gene position: 50845-51207 (Clockwise)

Preceding gene: 170076680

Following gene: 170076682

Centisome position: 1.69

GC content: 43.8

Gene sequence:

>363_bases
ATGGCAACTTTATTATTAGTTGAAGATAGTCCGACAGAAGCACAAATTATCACAAGTTGCCTAGAAAATGCCGGGTTTAG
CTTGCTAAAGGTGACGACGGCAGAGGCAGCGCGGGCCATCCTAGATCACAAAATGATCGATGGCATTGTCTTGGATGTGG
TGCTGCCGGGCCAAAGCGGTTTTGGCTTTTGTCGTGAGGTGAAAAATAATCCAAAAACCCAAAATATTCCCATCATCATG
TGCTCTAGCAAAGCTGAAAAAATGGATAAAAAATGGGCCAGTAAACAGGGGGCCAATGATTATGTCACTAAACCCATTGA
CCAAAATGAATTGTTAAACGCGGTACGGCGTTGGATCCCTTAA

Upstream 100 bases:

>100_bases
TCTAGCTCTACCCGATAAAATTTGACTTTTCAAAGTTTACTTAAGGGTTGCTCTCAAACAAGAATTGTTATTTAATTTGA
ATTTTCCCCAGAGGTTTGTA

Downstream 100 bases:

>100_bases
GCTTGGCGCTGCCTGATTTGCCGTCCCGTCTAGCGCAACTTTTGTTGACTGAAGTTTGATTTGGAGCGTTGTTTATGGCC
CCTGTGACCTCTGCCCCGGA

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MATLLLVEDSPTEAQIITSCLENAGFSLLKVTTAEAARAILDHKMIDGIVLDVVLPGQSGFGFCREVKNNPKTQNIPIIM
CSSKAEKMDKKWASKQGANDYVTKPIDQNELLNAVRRWIP

Sequences:

>Translated_120_residues
MATLLLVEDSPTEAQIITSCLENAGFSLLKVTTAEAARAILDHKMIDGIVLDVVLPGQSGFGFCREVKNNPKTQNIPIIM
CSSKAEKMDKKWASKQGANDYVTKPIDQNELLNAVRRWIP
>Mature_119_residues
ATLLLVEDSPTEAQIITSCLENAGFSLLKVTTAEAARAILDHKMIDGIVLDVVLPGQSGFGFCREVKNNPKTQNIPIIMC
SSKAEKMDKKWASKQGANDYVTKPIDQNELLNAVRRWIP

Specific function: May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=113, Percent_Identity=31.858407079646, Blast_Score=73, Evalue=5e-15,
Organism=Escherichia coli, GI1789809, Length=113, Percent_Identity=31.858407079646, Blast_Score=72, Evalue=8e-15,
Organism=Escherichia coli, GI1788394, Length=113, Percent_Identity=30.0884955752212, Blast_Score=70, Evalue=4e-14,
Organism=Escherichia coli, GI1787229, Length=113, Percent_Identity=26.5486725663717, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 13215; Mature: 13084

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLLLVEDSPTEAQIITSCLENAGFSLLKVTTAEAARAILDHKMIDGIVLDVVLPGQSG
CCEEEEEECCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCEEEEEEECCCCC
FGFCREVKNNPKTQNIPIIMCSSKAEKMDKKWASKQGANDYVTKPIDQNELLNAVRRWIP
CHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
ATLLLVEDSPTEAQIITSCLENAGFSLLKVTTAEAARAILDHKMIDGIVLDVVLPGQSG
CEEEEEECCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCEEEEEEECCCCC
FGFCREVKNNPKTQNIPIIMCSSKAEKMDKKWASKQGANDYVTKPIDQNELLNAVRRWIP
CHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7908398; 10984043 [H]