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The map label for this gene is yddE [C]

Identifier: 170076674

GI number: 170076674

Start: 36701

End: 37603

Strand: Direct

Name: yddE [C]

Synonym: SYNPCC7002_A0039

Alternate gene names: 170076674

Gene position: 36701-37603 (Clockwise)

Preceding gene: 170076673

Following gene: 170076678

Centisome position: 1.22

GC content: 52.27

Gene sequence:

>903_bases
ATGTCACAAACCTATACTTTTCATACCCTCGATGTGTTTACAGAGCAAATTTTCGGGGGTAATCCCCTGGCGGTGTTCCC
CCAGGCCCAAGGGTTAAGTTCGCATCAAATGCAGGCAATCGCCAAGGAGCTTAACCTTTCAGAAACTGTCTTTGTTTTTC
CCACAAAAGATCCTGATACGGACTTTCAACTGCGGATTTTTACGCCCGCCGCCGAGATTCCCTTTGCGGGCCATCCCACC
GTGGGAACCGCCTACCTTCTGGCCCATCTCGGTTATCTACCTGCAAATTGTCAGCTTGTGCGCTTCCAAGAAGAAGTGGG
GATTGTCCCCGTCTCTATCTATTGGGAACAGGATCAAGTTCGTACCACTGCCCTAAGTGCGGCCCAGTTGCCCCAGTTTA
TTGAGCGATCGCAATCCATCGATTACGCTTCCCTGGTAAATCTCCAGGCCCACGACTTACACCCGGTGCTAAAACCGGCG
GTGATTTCCTGTGGACTGCCCTTTTTATATTTGCCCCTCAAGGATCTCGATGCCCTGAGCCGTTGCTCCCTCAACCGCAC
CTTTTGGGAAAAAGAATGCCAGCATCAACTGGCAGCCCACATCTATCCCTTTGTCGTAACCGAAGACAATCAAATTTATG
CGCGGATGTTTGCCCCCGGCCTGGGCATTGCTGAAGATCCGGCAACGGGTTCAGCGGCCACGAGTTTGGCGGGTTATCTA
CATCGCTACCTACCCAGCCAGGCGACATTACAAACTTGGCAGATTTACCAAGGCATTCAAATGGGGCGGCCCAGTCAGCT
CATGCTGACCATGCAACAGCAAAAAGGGGAATTGACGGAAATCGCCGTGGGCGGCTCTTCTGTGCTCGTCAGTGTCGGCC
ACATTAATGTGCCAACGTTTTAG

Upstream 100 bases:

>100_bases
TCAAAAAAGAAGATCTGATTCCGCAAATTCTTGATTTAGCAGACGTTTCCATTCAAATCTCCACGGCACCGGCCTTAGTT
TAAGTTTATTTTTAACCTAT

Downstream 100 bases:

>100_bases
ACAAAAAAAGATCCCTAAAACAATTAGGGATCTCGTTTCTCACCGTAGTAAGGATCTCGATGCCCTGAGCCGTTGCTCCC
TCAACCGCACCTTTTGGGAA

Product: PhzF family phenazine biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSQTYTFHTLDVFTEQIFGGNPLAVFPQAQGLSSHQMQAIAKELNLSETVFVFPTKDPDTDFQLRIFTPAAEIPFAGHPT
VGTAYLLAHLGYLPANCQLVRFQEEVGIVPVSIYWEQDQVRTTALSAAQLPQFIERSQSIDYASLVNLQAHDLHPVLKPA
VISCGLPFLYLPLKDLDALSRCSLNRTFWEKECQHQLAAHIYPFVVTEDNQIYARMFAPGLGIAEDPATGSAATSLAGYL
HRYLPSQATLQTWQIYQGIQMGRPSQLMLTMQQQKGELTEIAVGGSSVLVSVGHINVPTF

Sequences:

>Translated_300_residues
MSQTYTFHTLDVFTEQIFGGNPLAVFPQAQGLSSHQMQAIAKELNLSETVFVFPTKDPDTDFQLRIFTPAAEIPFAGHPT
VGTAYLLAHLGYLPANCQLVRFQEEVGIVPVSIYWEQDQVRTTALSAAQLPQFIERSQSIDYASLVNLQAHDLHPVLKPA
VISCGLPFLYLPLKDLDALSRCSLNRTFWEKECQHQLAAHIYPFVVTEDNQIYARMFAPGLGIAEDPATGSAATSLAGYL
HRYLPSQATLQTWQIYQGIQMGRPSQLMLTMQQQKGELTEIAVGGSSVLVSVGHINVPTF
>Mature_299_residues
SQTYTFHTLDVFTEQIFGGNPLAVFPQAQGLSSHQMQAIAKELNLSETVFVFPTKDPDTDFQLRIFTPAAEIPFAGHPTV
GTAYLLAHLGYLPANCQLVRFQEEVGIVPVSIYWEQDQVRTTALSAAQLPQFIERSQSIDYASLVNLQAHDLHPVLKPAV
ISCGLPFLYLPLKDLDALSRCSLNRTFWEKECQHQLAAHIYPFVVTEDNQIYARMFAPGLGIAEDPATGSAATSLAGYLH
RYLPSQATLQTWQIYQGIQMGRPSQLMLTMQQQKGELTEIAVGGSSVLVSVGHINVPTF

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Escherichia coli, GI1787737, Length=291, Percent_Identity=31.2714776632302, Blast_Score=115, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6321818, Length=313, Percent_Identity=27.1565495207668, Blast_Score=109, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 33182; Mature: 33051

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTYTFHTLDVFTEQIFGGNPLAVFPQAQGLSSHQMQAIAKELNLSETVFVFPTKDPDT
CCCEEEEEHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCC
DFQLRIFTPAAEIPFAGHPTVGTAYLLAHLGYLPANCQLVRFQEEVGIVPVSIYWEQDQV
CEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEHHCCEEEEEEEECCCHH
RTTALSAAQLPQFIERSQSIDYASLVNLQAHDLHPVLKPAVISCGLPFLYLPLKDLDALS
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHCCCHHHHHHHHHCCCCEEEECHHHHHHHH
RCSLNRTFWEKECQHQLAAHIYPFVVTEDNQIYARMFAPGLGIAEDPATGSAATSLAGYL
HHCCCHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
HRYLPSQATLQTWQIYQGIQMGRPSQLMLTMQQQKGELTEIAVGGSSVLVSVGHINVPTF
HHHCCCCHHHHHHHHHHHHHCCCCHHEEEEEHHCCCCEEEEEECCCEEEEEECEECCCCC
>Mature Secondary Structure 
SQTYTFHTLDVFTEQIFGGNPLAVFPQAQGLSSHQMQAIAKELNLSETVFVFPTKDPDT
CCEEEEEHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCC
DFQLRIFTPAAEIPFAGHPTVGTAYLLAHLGYLPANCQLVRFQEEVGIVPVSIYWEQDQV
CEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEHHCCEEEEEEEECCCHH
RTTALSAAQLPQFIERSQSIDYASLVNLQAHDLHPVLKPAVISCGLPFLYLPLKDLDALS
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHCCCHHHHHHHHHCCCCEEEECHHHHHHHH
RCSLNRTFWEKECQHQLAAHIYPFVVTEDNQIYARMFAPGLGIAEDPATGSAATSLAGYL
HHCCCHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
HRYLPSQATLQTWQIYQGIQMGRPSQLMLTMQQQKGELTEIAVGGSSVLVSVGHINVPTF
HHHCCCCHHHHHHHHHHHHHCCCCHHEEEEEHHCCCCEEEEEECCCEEEEEECEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]