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The map label for this gene is trpS [H]

Identifier: 170076672

GI number: 170076672

Start: 34718

End: 35728

Strand: Direct

Name: trpS [H]

Synonym: SYNPCC7002_A0037

Alternate gene names: 170076672

Gene position: 34718-35728 (Clockwise)

Preceding gene: 170076667

Following gene: 170076673

Centisome position: 1.15

GC content: 50.45

Gene sequence:

>1011_bases
ATGGCGAAACAGCGCATTCTCTCTGGGGTACAACCCACTGGTAATCTTCACCTCGGCAACTATCTTGGGGCGATCCAAAA
CTGGGTGGAAATTCAACAGGACTATGACAGTTTTTTCTGTGTGGTAGATCTCCACGCGATTACGGTGCCCCATGACCCCA
AGGTTCTAGCAAATAATACAAAGGCGATCGCCGCGTTGTATCTTGCCTGTGGCATTGACTTGACCCACTCGACCATTTTT
GTTCAATCCCACGTTAAAGCCCATAGCGAATTGGCCTGGTTGTTAAATTGTGTGACGCCCCTGAACTGGTTAGAGCGGAT
GATTCAGTTCAAAGAAAAAGCCCAAAAACAAGGGGAAAACGTCAGCGTTGGCCTGCTCGATTATCCGGTGCTGATGGCCG
CTGATATTCTCCTGTATGATGCCGATAAAGTGCCCGTGGGCGAAGACCAAAAACAACATTTAGAGCTGACCCGCGACATT
GTGATCCGCATTAACGACAAATTTGGCACGAAGAAAAACCCCGTGCTGAAAATGCCGGATCCGCTGATTCGGACAACGGG
GGCTAGGGTGATGAGCCTCACCGATGGCACGAAGAAAATGTCCAAGTCCGATCCCTCGGAACTAAGCCGGATTAATCTTT
TGGATCCCCCCGATGTCCTGACGAAGAAAATCAAAAAGTGCAAAACCGATCCCGAACGGGGCCTAGAGTTTGACAATCCT
AACCGCCCGGAATGCAATAACTTGCTGGGGTTGTATGCTCTGCTCAGTGGTAAACCCAAAGAAACCGTAGCCGCTGAATG
TGCCGATATGGGCTGGGGTCAATTTAAACCCCTCCTCACAGAGACCGTCATTGCCGCCCTGGAGCCAATCCAAACGAAAT
ACCATGACATTATGGCGAACCCCGATTACCTCGATCAGGTGTTGCGGGAAGGCCGTGAAAAAGCTGACACTGTTGCAAAT
GCAACCCTCAAGCAGGTGAAAGACGCCCTTGGTTTTCTGCCGTCCCTGTAG

Upstream 100 bases:

>100_bases
CGCTAAAAGGAAGGCGATCGCCCCTGGGCTTTGTCAGGCAACTTTACAGTCTGAAACATTTGGCCGATAATCATTGGGGC
ATTCCACACCGTAGCGATCC

Downstream 100 bases:

>100_bases
AATGGTTCATTACCTGTGATTTTTTAACCCTAAAACTGCTTCCATGACCACCCGTCTGCGTCGTGCCATCGAAAATCGAG
ACTTTGTCGTTACGGCTGAG

Product: tryptophanyl-tRNA synthetase

Products: NA

Alternate protein names: Tryptophan--tRNA ligase; TrpRS [H]

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MAKQRILSGVQPTGNLHLGNYLGAIQNWVEIQQDYDSFFCVVDLHAITVPHDPKVLANNTKAIAALYLACGIDLTHSTIF
VQSHVKAHSELAWLLNCVTPLNWLERMIQFKEKAQKQGENVSVGLLDYPVLMAADILLYDADKVPVGEDQKQHLELTRDI
VIRINDKFGTKKNPVLKMPDPLIRTTGARVMSLTDGTKKMSKSDPSELSRINLLDPPDVLTKKIKKCKTDPERGLEFDNP
NRPECNNLLGLYALLSGKPKETVAAECADMGWGQFKPLLTETVIAALEPIQTKYHDIMANPDYLDQVLREGREKADTVAN
ATLKQVKDALGFLPSL

Sequences:

>Translated_336_residues
MAKQRILSGVQPTGNLHLGNYLGAIQNWVEIQQDYDSFFCVVDLHAITVPHDPKVLANNTKAIAALYLACGIDLTHSTIF
VQSHVKAHSELAWLLNCVTPLNWLERMIQFKEKAQKQGENVSVGLLDYPVLMAADILLYDADKVPVGEDQKQHLELTRDI
VIRINDKFGTKKNPVLKMPDPLIRTTGARVMSLTDGTKKMSKSDPSELSRINLLDPPDVLTKKIKKCKTDPERGLEFDNP
NRPECNNLLGLYALLSGKPKETVAAECADMGWGQFKPLLTETVIAALEPIQTKYHDIMANPDYLDQVLREGREKADTVAN
ATLKQVKDALGFLPSL
>Mature_335_residues
AKQRILSGVQPTGNLHLGNYLGAIQNWVEIQQDYDSFFCVVDLHAITVPHDPKVLANNTKAIAALYLACGIDLTHSTIFV
QSHVKAHSELAWLLNCVTPLNWLERMIQFKEKAQKQGENVSVGLLDYPVLMAADILLYDADKVPVGEDQKQHLELTRDIV
IRINDKFGTKKNPVLKMPDPLIRTTGARVMSLTDGTKKMSKSDPSELSRINLLDPPDVLTKKIKKCKTDPERGLEFDNPN
RPECNNLLGLYALLSGKPKETVAAECADMGWGQFKPLLTETVIAALEPIQTKYHDIMANPDYLDQVLREGREKADTVANA
TLKQVKDALGFLPSL

Specific function: Unknown

COG id: COG0180

COG function: function code J; Tryptophanyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI7710154, Length=333, Percent_Identity=40.8408408408408, Blast_Score=266, Evalue=2e-71,
Organism=Homo sapiens, GI41352700, Length=169, Percent_Identity=52.6627218934911, Blast_Score=188, Evalue=8e-48,
Organism=Escherichia coli, GI1789786, Length=335, Percent_Identity=45.9701492537313, Blast_Score=301, Evalue=4e-83,
Organism=Caenorhabditis elegans, GI71982800, Length=335, Percent_Identity=35.8208955223881, Blast_Score=198, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI71982793, Length=335, Percent_Identity=35.8208955223881, Blast_Score=197, Evalue=9e-51,
Organism=Saccharomyces cerevisiae, GI6320474, Length=347, Percent_Identity=37.463976945245, Blast_Score=198, Evalue=9e-52,
Organism=Drosophila melanogaster, GI24666151, Length=331, Percent_Identity=41.6918429003021, Blast_Score=249, Evalue=1e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001412
- InterPro:   IPR002305
- InterPro:   IPR014729
- InterPro:   IPR002306 [H]

Pfam domain/function: PF00579 tRNA-synt_1b [H]

EC number: =6.1.1.2 [H]

Molecular weight: Translated: 37407; Mature: 37275

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQRILSGVQPTGNLHLGNYLGAIQNWVEIQQDYDSFFCVVDLHAITVPHDPKVLANNT
CCHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCHHCCCH
KAIAALYLACGIDLTHSTIFVQSHVKAHSELAWLLNCVTPLNWLERMIQFKEKAQKQGEN
HHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VSVGLLDYPVLMAADILLYDADKVPVGEDQKQHLELTRDIVIRINDKFGTKKNPVLKMPD
EEEEHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHEEEEEEECCCCCCCCCCCCCCCC
PLIRTTGARVMSLTDGTKKMSKSDPSELSRINLLDPPDVLTKKIKKCKTDPERGLEFDNP
HHHHHCCCEEEEECCCHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCHHHCCCCCCC
NRPECNNLLGLYALLSGKPKETVAAECADMGWGQFKPLLTETVIAALEPIQTKYHDIMAN
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDYLDQVLREGREKADTVANATLKQVKDALGFLPSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AKQRILSGVQPTGNLHLGNYLGAIQNWVEIQQDYDSFFCVVDLHAITVPHDPKVLANNT
CHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCHHCCCH
KAIAALYLACGIDLTHSTIFVQSHVKAHSELAWLLNCVTPLNWLERMIQFKEKAQKQGEN
HHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VSVGLLDYPVLMAADILLYDADKVPVGEDQKQHLELTRDIVIRINDKFGTKKNPVLKMPD
EEEEHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHEEEEEEECCCCCCCCCCCCCCCC
PLIRTTGARVMSLTDGTKKMSKSDPSELSRINLLDPPDVLTKKIKKCKTDPERGLEFDNP
HHHHHCCCEEEEECCCHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCHHHCCCCCCC
NRPECNNLLGLYALLSGKPKETVAAECADMGWGQFKPLLTETVIAALEPIQTKYHDIMAN
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDYLDQVLREGREKADTVANATLKQVKDALGFLPSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]