| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170076650
Identifier: 170076650
GI number: 170076650
Start: 9729
End: 10484
Strand: Direct
Name: 170076650
Synonym: SYNPCC7002_A0014
Alternate gene names: NA
Gene position: 9729-10484 (Clockwise)
Preceding gene: 170076649
Following gene: 170076651
Centisome position: 0.32
GC content: 52.91
Gene sequence:
>756_bases ATGTCCAATCTGCCCAAATCCTTTGAAGAAACCCTCGAACAAGCGAAAGCCGCAACCCTAAACAGTTTAGAAGCAGGCTG TGGGCGGATTTTGATTGAATTGTGCTTTCCCGAAATTGCCCTACAGGCCCAGGCGCTGGCCTGGAATTGGGCGCAATTGT TTGTTGAGGATTATGGTTCGGGGTTGAAAATCTTCTTTCCGGATACGGGCGCCGCAGCTTTGGCCCGGCGGGATTGGGGC GAAATTCCCTTTAAGGTGGCGGATATCGGCACGTCGCGATCGCCGATTGAGAATAAAATCGGTGATGATGACCAGATCTT TATCATTGTCTGCCCGTCGGCGGTGGAAGTAGGCCAAGTGGAAAAGCTCTGTAATTTGGCAGGCGATCGCCCGGTGATTA TGTTGATTCCCCAACTGGAGGACGTATCCATTGTCGGGATTGGCTATGCGGCGCGGCAACTGCGGGAGCGGTTTATCAGC ACCCTCGAAACCGCCTACTACATCCGACCCTACGAAAGCGCGATGGTTTGGCGTTCTTACCCCTCGGCCTGGGAAGTGTA TCTCGAAAAAGAGGAAGACCAATACGAACTCATCGCCAGCGAAACGACCAAACCCCTTGGCGAATATTTAGAGCGGCTGC TGTTGGCGGCGGTGGAACCCGAAGCGGGGGAAGCAGCAAATCCCAACGCACCGAAAATCAAGAAAACAGGACTGCTTGGG GGTCTGCAAAACTTTCTAAAAGCCCTCAGCAATTAA
Upstream 100 bases:
>100_bases GGAAAAAAATTACTGCATTTATTTCGAAAGAAAAGTTTTTTGACGAAGCCAGAGAAAAAGTTTGATAATAAACCAATATC TTGTTGTGCGTCGGTAAACC
Downstream 100 bases:
>100_bases GTTTAAGACCGCATAACCGATGATTGATAACTGTTCACTAACCATTGCCGTGGTGGGAGATGTCCATGACCAATGGGATG CCGTTGGCGATCGCCAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSNLPKSFEETLEQAKAATLNSLEAGCGRILIELCFPEIALQAQALAWNWAQLFVEDYGSGLKIFFPDTGAAALARRDWG EIPFKVADIGTSRSPIENKIGDDDQIFIIVCPSAVEVGQVEKLCNLAGDRPVIMLIPQLEDVSIVGIGYAARQLRERFIS TLETAYYIRPYESAMVWRSYPSAWEVYLEKEEDQYELIASETTKPLGEYLERLLLAAVEPEAGEAANPNAPKIKKTGLLG GLQNFLKALSN
Sequences:
>Translated_251_residues MSNLPKSFEETLEQAKAATLNSLEAGCGRILIELCFPEIALQAQALAWNWAQLFVEDYGSGLKIFFPDTGAAALARRDWG EIPFKVADIGTSRSPIENKIGDDDQIFIIVCPSAVEVGQVEKLCNLAGDRPVIMLIPQLEDVSIVGIGYAARQLRERFIS TLETAYYIRPYESAMVWRSYPSAWEVYLEKEEDQYELIASETTKPLGEYLERLLLAAVEPEAGEAANPNAPKIKKTGLLG GLQNFLKALSN >Mature_250_residues SNLPKSFEETLEQAKAATLNSLEAGCGRILIELCFPEIALQAQALAWNWAQLFVEDYGSGLKIFFPDTGAAALARRDWGE IPFKVADIGTSRSPIENKIGDDDQIFIIVCPSAVEVGQVEKLCNLAGDRPVIMLIPQLEDVSIVGIGYAARQLRERFIST LETAYYIRPYESAMVWRSYPSAWEVYLEKEEDQYELIASETTKPLGEYLERLLLAAVEPEAGEAANPNAPKIKKTGLLGG LQNFLKALSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27762; Mature: 27631
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLPKSFEETLEQAKAATLNSLEAGCGRILIELCFPEIALQAQALAWNWAQLFVEDYGS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLKIFFPDTGAAALARRDWGEIPFKVADIGTSRSPIENKIGDDDQIFIIVCPSAVEVGQV CEEEEECCCCHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCCCCEEEEEECCCCCCHHHH EKLCNLAGDRPVIMLIPQLEDVSIVGIGYAARQLRERFISTLETAYYIRPYESAMVWRSY HHHHHHCCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCC PSAWEVYLEKEEDQYELIASETTKPLGEYLERLLLAAVEPEAGEAANPNAPKIKKTGLLG CCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH GLQNFLKALSN HHHHHHHHHCC >Mature Secondary Structure SNLPKSFEETLEQAKAATLNSLEAGCGRILIELCFPEIALQAQALAWNWAQLFVEDYGS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLKIFFPDTGAAALARRDWGEIPFKVADIGTSRSPIENKIGDDDQIFIIVCPSAVEVGQV CEEEEECCCCHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCCCCEEEEEECCCCCCHHHH EKLCNLAGDRPVIMLIPQLEDVSIVGIGYAARQLRERFISTLETAYYIRPYESAMVWRSY HHHHHHCCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCC PSAWEVYLEKEEDQYELIASETTKPLGEYLERLLLAAVEPEAGEAANPNAPKIKKTGLLG CCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH GLQNFLKALSN HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA