| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170076651
Identifier: 170076651
GI number: 170076651
Start: 10609
End: 11418
Strand: Direct
Name: 170076651
Synonym: SYNPCC7002_A0015
Alternate gene names: NA
Gene position: 10609-11418 (Clockwise)
Preceding gene: 170076650
Following gene: 170076654
Centisome position: 0.35
GC content: 52.72
Gene sequence:
>810_bases GTGTTGTTTGTCGGGGATTTTGGCAACGAAGCGGTGAAATTAGTGCAACAAGTGGCAGCGCTTCCTTTCCCCAAAGCAGT AATTTTGGGCAACCATGATGCTTGGTATACTGCCTCCGATTGGGGTCGCAAAAAAGCCCCCTACGACCATGCCACCGAAG ATCGTGTGCAAGCCCAGTTAGAGATTCTGGGGGCAACCCATGTAGGCTACGGCCATTTGGATTTACCGGAGTTTCAGCTT TCAGTGGTCGGGGCACGGCCCTTTAGTTGGGGGGGTGAGAAGTGGAAAAATGAAAAATTCTATGGTGATCGCTATGGCGT CCATGACTTTACGGAATCCACCGCGTTAATTGAGAAAAATATTGCGGCCTGTCAGTACGAAACCCTGATCTTTCTCGGAC ATAATGGCCCTACCGGATTGGGTTCGGAACCAGAAGATATGTGTGGTCGCGATTGGAATCCCCTGGGGGGTGATTTTGGT GATCCGGATTTTGCCCAGGCCCTGGCGATCGCCCGCCGTCAGAATAAGACAATTCCCCTAGTCACCTTTGGCCACATGCA CCACAGCCTCCGGCACCGCAAAGATCGCCTACGCACCCAATGCCAATTTTCAGACGAAACCCTCTATTTCAATGCCGCCC GCGTCCCCAGAATTCAAACCTACAACAATGGCGATCGCCACCACAGTTTTTCTGTGATTACCCTCACCCAAGGCCGACCG ACGAAAGCCGAACTGGTGTGGGTCAATCCAATCAGCCAGCAGCAAACGAGGGAAACCCTCTGGTCGCAGCCCCTCAACTC TCTTCCGTAA
Upstream 100 bases:
>100_bases TGATAACTGTTCACTAACCATTGCCGTGGTGGGAGATGTCCATGACCAATGGGATGCCGTTGGCGATCGCCAAGCCCTGG AGATTCTTGGGGTAGATCTC
Downstream 100 bases:
>100_bases CCTCGATCACGTTGCCGTCTGGGTCTTGCAAAAATAAGGCTCGTCGCCCCGATGCGCTCATCTCATAGGGGTAATTTTCT CCGTCCAACTGCGATCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Metallophosphoesterase; Phosphoesterase; Ser/Thr Protein Phosphatase Family Protein; Transcripton Factor DevT-Like; Transcripton Factor For Heterocyst Differentiation
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MLFVGDFGNEAVKLVQQVAALPFPKAVILGNHDAWYTASDWGRKKAPYDHATEDRVQAQLEILGATHVGYGHLDLPEFQL SVVGARPFSWGGEKWKNEKFYGDRYGVHDFTESTALIEKNIAACQYETLIFLGHNGPTGLGSEPEDMCGRDWNPLGGDFG DPDFAQALAIARRQNKTIPLVTFGHMHHSLRHRKDRLRTQCQFSDETLYFNAARVPRIQTYNNGDRHHSFSVITLTQGRP TKAELVWVNPISQQQTRETLWSQPLNSLP
Sequences:
>Translated_269_residues MLFVGDFGNEAVKLVQQVAALPFPKAVILGNHDAWYTASDWGRKKAPYDHATEDRVQAQLEILGATHVGYGHLDLPEFQL SVVGARPFSWGGEKWKNEKFYGDRYGVHDFTESTALIEKNIAACQYETLIFLGHNGPTGLGSEPEDMCGRDWNPLGGDFG DPDFAQALAIARRQNKTIPLVTFGHMHHSLRHRKDRLRTQCQFSDETLYFNAARVPRIQTYNNGDRHHSFSVITLTQGRP TKAELVWVNPISQQQTRETLWSQPLNSLP >Mature_269_residues MLFVGDFGNEAVKLVQQVAALPFPKAVILGNHDAWYTASDWGRKKAPYDHATEDRVQAQLEILGATHVGYGHLDLPEFQL SVVGARPFSWGGEKWKNEKFYGDRYGVHDFTESTALIEKNIAACQYETLIFLGHNGPTGLGSEPEDMCGRDWNPLGGDFG DPDFAQALAIARRQNKTIPLVTFGHMHHSLRHRKDRLRTQCQFSDETLYFNAARVPRIQTYNNGDRHHSFSVITLTQGRP TKAELVWVNPISQQQTRETLWSQPLNSLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30373; Mature: 30373
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFVGDFGNEAVKLVQQVAALPFPKAVILGNHDAWYTASDWGRKKAPYDHATEDRVQAQL CEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHH EILGATHVGYGHLDLPEFQLSVVGARPFSWGGEKWKNEKFYGDRYGVHDFTESTALIEKN HEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH IAACQYETLIFLGHNGPTGLGSEPEDMCGRDWNPLGGDFGDPDFAQALAIARRQNKTIPL HHHEEEEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE VTFGHMHHSLRHRKDRLRTQCQFSDETLYFNAARVPRIQTYNNGDRHHSFSVITLTQGRP EEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCEEEEEEEEEECCCC TKAELVWVNPISQQQTRETLWSQPLNSLP CCEEEEEECCCCHHHHHHHHHHCHHHCCC >Mature Secondary Structure MLFVGDFGNEAVKLVQQVAALPFPKAVILGNHDAWYTASDWGRKKAPYDHATEDRVQAQL CEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHH EILGATHVGYGHLDLPEFQLSVVGARPFSWGGEKWKNEKFYGDRYGVHDFTESTALIEKN HEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH IAACQYETLIFLGHNGPTGLGSEPEDMCGRDWNPLGGDFGDPDFAQALAIARRQNKTIPL HHHEEEEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE VTFGHMHHSLRHRKDRLRTQCQFSDETLYFNAARVPRIQTYNNGDRHHSFSVITLTQGRP EEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCEEEEEEEEEECCCC TKAELVWVNPISQQQTRETLWSQPLNSLP CCEEEEEECCCCHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA