| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170025846
Identifier: 170025846
GI number: 170025846
Start: 4008140
End: 4008301
Strand: Reverse
Name: 170025846
Synonym: YPK_3631
Alternate gene names: NA
Gene position: 4008301-4008140 (Counterclockwise)
Preceding gene: 170025847
Following gene: 170025845
Centisome position: 85.48
GC content: 46.3
Gene sequence:
>162_bases ATGTTTCGCTGGGGCATTATTTTTCTAATTATTGCGTTAATCGCGGCCGCATTAGGTTTTGGTGGATTGGCCGGTACTGC GGCTTGGGCAGCAAAAGTGGTCTTTGTAGTGGGGATTATTTTGTTCCTCATCAGTCTGTTTACGGGACGTAAGCGCCTTT AA
Upstream 100 bases:
>100_bases CCCCAAGCCGTTCGTCAACTGAGTTAATTTCCTCTGAGAGCCAAATGAAAGGGTGTCTGTTTAATCAGGCACCTTATCTT TAAACTGGAAGGAGAAGCTT
Downstream 100 bases:
>100_bases CAAGGCAGTAGGGGTGACAGCAAAGGGCAATAAGGGGTATCGTCAACACCTGTTCGTCATGAATTAAGGATAGATGGTGG GATACAGAATACCTATTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 53
Protein sequence:
>53_residues MFRWGIIFLIIALIAAALGFGGLAGTAAWAAKVVFVVGIILFLISLFTGRKRL
Sequences:
>Translated_53_residues MFRWGIIFLIIALIAAALGFGGLAGTAAWAAKVVFVVGIILFLISLFTGRKRL >Mature_53_residues MFRWGIIFLIIALIAAALGFGGLAGTAAWAAKVVFVVGIILFLISLFTGRKRL
Specific function: Unknown
COG id: COG5487
COG function: function code S; Small integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0391 family [H]
Homologues:
Organism=Escherichia coli, GI145693221, Length=52, Percent_Identity=90.3846153846154, Blast_Score=62, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009760 [H]
Pfam domain/function: PF07043 DUF1328 [H]
EC number: NA
Molecular weight: Translated: 5665; Mature: 5665
Theoretical pI: Translated: 12.81; Mature: 12.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRWGIIFLIIALIAAALGFGGLAGTAAWAAKVVFVVGIILFLISLFTGRKRL CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFRWGIIFLIIALIAAALGFGGLAGTAAWAAKVVFVVGIILFLISLFTGRKRL CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA