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The map label for this gene is 170025773

Identifier: 170025773

GI number: 170025773

Start: 3917120

End: 3919468

Strand: Reverse

Name: 170025773

Synonym: YPK_3558

Alternate gene names: NA

Gene position: 3919468-3917120 (Counterclockwise)

Preceding gene: 170025774

Following gene: 170025772

Centisome position: 83.58

GC content: 51.72

Gene sequence:

>2349_bases
ATGCAATTAATTGAGATAGAGAATGAGGTTTTATCGGGCCAGGATGCTTTTCCTCTCTCCTTCAAGACGCAGGAAAAAGT
GTCAGGGAATCCATCCTACCAACTGGTATTTCAGGTAGCAGAAGCGGACCTCGATCTGGTCAGTTTGCTGGGGGAAATCA
TCAAAGTCAGGATTGAGTTACCTGACTCAGCCGGCTACCGGACCTTTTTTACCTATGTGATCGCCGGTGCTGATGAAGGG
CAACGGCAAGACAAATTTGTTTACAGCCTGGAACTGAGTACCTGGACGTGGTTTTTGATGCAAAACCGCAACTGCCGGAT
ATTTCAGGACCTGAATATTATCGATATTATCGAACAGGTATTTTCCAAATATAACTTTGCGGATTACCGTTTTGATATTG
TCGGTAACTATCGGTTACGCGAGTACTGCGTACAGTTTGCAGAAACCGATTTCGACTTTGTTAATCGTCTGATGGAAGAC
GAAGGCGTTTGGTATTACTTCGAACATAACGAAGATAAGCACACGCTGGTCATGACAGATCAGCAACAATTCCCTGTATT
GGAAGGGCATTATGCAGAACTGAGTTTCCTGCCTGACAGTGAAGAGATGCGCGCCATCCGTGAGGGGATACAGCGTATTC
AACGCTCACAACGCATCCACTCCAGCGAAATTGTCTTACGTGACTTCGATTTCCTTAATCCACGCAATACATTACAAACC
CATATCGAAGAAAGCCGCCAACACCTGCAAGGCGTACCACTGGAATGGTATGACTACGCGGCGGGTTACACCGATCCCCA
GCATGGTGAGAGCATCGCCCGTTTACGCCTTGAAGCTATACAGAGTAATGGGCAGCTCTTGTCTGGTGAAAGTAATGCCA
CAGGATTAGTGCCAGGGCGCTCTTTTGCTCTGGTACAGCACCCTGATAACAACCGTAATCGGGGATTCAAACTGATCAGT
TGTGACTACAGTTTTGTCCAGGATGGGCCGGACAGTGCGAGCCAGGGACGTAATGTCGCCTGTAAGTTTAAGGCATTGAA
TGATGACGTCGTTTATCGTCCACAATGTGTCACGCCACCGCCAAAGGTCCCTGGTGTGCAAAGTGCCACAGTGGTCGGTG
CGCGTGAATCAGAAGTGCATACCGATAAGTTCGCCCGTATTCGCGTTCACTTTCACTGGGATCGTTATAAAACCACCGAA
GATGATAGCTCCTGCTGGATCCGCGTTGTACAGGCGTGGGCCGGTAAAGGCTGGGGCGTCCTGGCGATGCCTCGGGTCGG
GCAAGAAGTGCTGGTCAATTACGTTGACGGCGACCTTGATCGCCCGATGGTGACCGGGATCGTCTACAACGGTGAGAACC
CACCGCCTTACCGTTTACCTGACCACATTAACTACTCCGGTTTTGTCTCACGCTCACTGCGCTTTGGTCAGCCACAACAC
GCCAGCCAGCTTACCTTCGATGATAATCGGGGCAATGAGCGGATCATGCTACATGCTGAGCGCGACTTACAAAGAACGGT
TGAACGTAACAGTGCGACGGCCGTCGGTCAGGATAAATACGACACGGTGGAACGGACGGCCACGGAGTGGATCAACAACC
ATATCTCCTACAAAGACTTCAGTTTCTCGGTGACGGGCATGAGTGTCTCCGCGACGGGCATCAGTGTCTCGACAACGGGA
ACGAGCTTATCTGTCACCGGCATGAGCACCAGCGTCACGGGTGTCAGTGTGGGTTTCACCTTGATAGATACCTCCTTTAC
GGGTGTGAGCACATCGTTTACCGGTGTCGGTACCTCCTTCACCGGGGCCAGCAACTCGCTAACCGGTGTCAGCAACTCGA
TGACTGGGTGTAGTTCCTCGTTTACCGGTACTAGCAATAGCATGACAGGCAGTAGCCATAGCATGACCGGCATGAGCACC
AGCATCACCGGGCATAGCATGAGTCAGACGGGTTCCAGTAGCAGCATCACCGGTGACAGTACCTCCTTTACCGGCAGCAG
CGTCAGCAGTACGGGCAGCAGCGTCAGTACGACCGGTGTCAGTACCAGCACTACGGGGAGTAGCACCTCGACTACCGGTT
GTAGCGTCAGTACTACGGGTAGTAGCACCTCGACTACCGGTAATTCAGTCAGCATGACCGGTAACAGCACCAGTACCACG
GGATGCAGTATTTCCACGACGGGCAGCAGTATTGGGACGGTAGGAAGCAGTATCAGCACCACGGGCAGTAGCGTCAGTAC
CACCGGTAGCAGTATCAGCACCACGGGATTATCCGTCAGTTATACCGGCGCTCAATATTCCGATGTGGGTGTCGATCTGA
AAACCGTTGGCATGCAAAGCAAAAACTGA

Upstream 100 bases:

>100_bases
ATGTTTAGTCGACAACGGTTGTTGAGCTGAACGCTGTCGTTGGGCTGACAACTGACGTTTGGGCTGACGTGAGTACACAT
TTATTTTAAACGGGGCCGTT

Downstream 100 bases:

>100_bases
AAAGGAAGCATTATGCGCATCATTCGCCCGCAACAGCTCGTGGTCTTGAAAAGCAGTTACCAGATAGGCCATGAAAGCCA
TATGGGGATCAGCGTCGTTG

Product: type VI secretion system Vgr family protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Conserved Hypothethical Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 782; Mature: 782

Protein sequence:

>782_residues
MQLIEIENEVLSGQDAFPLSFKTQEKVSGNPSYQLVFQVAEADLDLVSLLGEIIKVRIELPDSAGYRTFFTYVIAGADEG
QRQDKFVYSLELSTWTWFLMQNRNCRIFQDLNIIDIIEQVFSKYNFADYRFDIVGNYRLREYCVQFAETDFDFVNRLMED
EGVWYYFEHNEDKHTLVMTDQQQFPVLEGHYAELSFLPDSEEMRAIREGIQRIQRSQRIHSSEIVLRDFDFLNPRNTLQT
HIEESRQHLQGVPLEWYDYAAGYTDPQHGESIARLRLEAIQSNGQLLSGESNATGLVPGRSFALVQHPDNNRNRGFKLIS
CDYSFVQDGPDSASQGRNVACKFKALNDDVVYRPQCVTPPPKVPGVQSATVVGARESEVHTDKFARIRVHFHWDRYKTTE
DDSSCWIRVVQAWAGKGWGVLAMPRVGQEVLVNYVDGDLDRPMVTGIVYNGENPPPYRLPDHINYSGFVSRSLRFGQPQH
ASQLTFDDNRGNERIMLHAERDLQRTVERNSATAVGQDKYDTVERTATEWINNHISYKDFSFSVTGMSVSATGISVSTTG
TSLSVTGMSTSVTGVSVGFTLIDTSFTGVSTSFTGVGTSFTGASNSLTGVSNSMTGCSSSFTGTSNSMTGSSHSMTGMST
SITGHSMSQTGSSSSITGDSTSFTGSSVSSTGSSVSTTGVSTSTTGSSTSTTGCSVSTTGSSTSTTGNSVSMTGNSTSTT
GCSISTTGSSIGTVGSSISTTGSSVSTTGSSISTTGLSVSYTGAQYSDVGVDLKTVGMQSKN

Sequences:

>Translated_782_residues
MQLIEIENEVLSGQDAFPLSFKTQEKVSGNPSYQLVFQVAEADLDLVSLLGEIIKVRIELPDSAGYRTFFTYVIAGADEG
QRQDKFVYSLELSTWTWFLMQNRNCRIFQDLNIIDIIEQVFSKYNFADYRFDIVGNYRLREYCVQFAETDFDFVNRLMED
EGVWYYFEHNEDKHTLVMTDQQQFPVLEGHYAELSFLPDSEEMRAIREGIQRIQRSQRIHSSEIVLRDFDFLNPRNTLQT
HIEESRQHLQGVPLEWYDYAAGYTDPQHGESIARLRLEAIQSNGQLLSGESNATGLVPGRSFALVQHPDNNRNRGFKLIS
CDYSFVQDGPDSASQGRNVACKFKALNDDVVYRPQCVTPPPKVPGVQSATVVGARESEVHTDKFARIRVHFHWDRYKTTE
DDSSCWIRVVQAWAGKGWGVLAMPRVGQEVLVNYVDGDLDRPMVTGIVYNGENPPPYRLPDHINYSGFVSRSLRFGQPQH
ASQLTFDDNRGNERIMLHAERDLQRTVERNSATAVGQDKYDTVERTATEWINNHISYKDFSFSVTGMSVSATGISVSTTG
TSLSVTGMSTSVTGVSVGFTLIDTSFTGVSTSFTGVGTSFTGASNSLTGVSNSMTGCSSSFTGTSNSMTGSSHSMTGMST
SITGHSMSQTGSSSSITGDSTSFTGSSVSSTGSSVSTTGVSTSTTGSSTSTTGCSVSTTGSSTSTTGNSVSMTGNSTSTT
GCSISTTGSSIGTVGSSISTTGSSVSTTGSSISTTGLSVSYTGAQYSDVGVDLKTVGMQSKN
>Mature_782_residues
MQLIEIENEVLSGQDAFPLSFKTQEKVSGNPSYQLVFQVAEADLDLVSLLGEIIKVRIELPDSAGYRTFFTYVIAGADEG
QRQDKFVYSLELSTWTWFLMQNRNCRIFQDLNIIDIIEQVFSKYNFADYRFDIVGNYRLREYCVQFAETDFDFVNRLMED
EGVWYYFEHNEDKHTLVMTDQQQFPVLEGHYAELSFLPDSEEMRAIREGIQRIQRSQRIHSSEIVLRDFDFLNPRNTLQT
HIEESRQHLQGVPLEWYDYAAGYTDPQHGESIARLRLEAIQSNGQLLSGESNATGLVPGRSFALVQHPDNNRNRGFKLIS
CDYSFVQDGPDSASQGRNVACKFKALNDDVVYRPQCVTPPPKVPGVQSATVVGARESEVHTDKFARIRVHFHWDRYKTTE
DDSSCWIRVVQAWAGKGWGVLAMPRVGQEVLVNYVDGDLDRPMVTGIVYNGENPPPYRLPDHINYSGFVSRSLRFGQPQH
ASQLTFDDNRGNERIMLHAERDLQRTVERNSATAVGQDKYDTVERTATEWINNHISYKDFSFSVTGMSVSATGISVSTTG
TSLSVTGMSTSVTGVSVGFTLIDTSFTGVSTSFTGVGTSFTGASNSLTGVSNSMTGCSSSFTGTSNSMTGSSHSMTGMST
SITGHSMSQTGSSSSITGDSTSFTGSSVSSTGSSVSTTGVSTSTTGSSTSTTGCSVSTTGSSTSTTGNSVSMTGNSTSTT
GCSISTTGSSIGTVGSSISTTGSSVSTTGSSISTTGLSVSYTGAQYSDVGVDLKTVGMQSKN

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85200; Mature: 85200

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLIEIENEVLSGQDAFPLSFKTQEKVSGNPSYQLVFQVAEADLDLVSLLGEIIKVRIEL
CEEEEECHHHHCCCCCCCCCCCCHHHCCCCCCEEEEEEEECCCHHHHHHHHHHEEEEEEC
PDSAGYRTFFTYVIAGADEGQRQDKFVYSLELSTWTWFLMQNRNCRIFQDLNIIDIIEQV
CCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECEEEEEEEECCCCEEEECCCHHHHHHHH
FSKYNFADYRFDIVGNYRLREYCVQFAETDFDFVNRLMEDEGVWYYFEHNEDKHTLVMTD
HHHCCCCEEEEEEEECCHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCEEEEEEC
QQQFPVLEGHYAELSFLPDSEEMRAIREGIQRIQRSQRIHSSEIVLRDFDFLNPRNTLQT
CCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
HIEESRQHLQGVPLEWYDYAAGYTDPQHGESIARLRLEAIQSNGQLLSGESNATGLVPGR
HHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCEECCCC
SFALVQHPDNNRNRGFKLISCDYSFVQDGPDSASQGRNVACKFKALNDDVVYRPQCVTPP
EEEEEECCCCCCCCCEEEEEECCHHHCCCCCCHHCCCCEEEEEEECCCCEEECCCCCCCC
PKVPGVQSATVVGARESEVHTDKFARIRVHFHWDRYKTTEDDSSCWIRVVQAWAGKGWGV
CCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCE
LAMPRVGQEVLVNYVDGDLDRPMVTGIVYNGENPPPYRLPDHINYSGFVSRSLRFGQPQH
EECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
ASQLTFDDNRGNERIMLHAERDLQRTVERNSATAVGQDKYDTVERTATEWINNHISYKDF
CCCCEECCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCE
SFSVTGMSVSATGISVSTTGTSLSVTGMSTSVTGVSVGFTLIDTSFTGVSTSFTGVGTSF
EEEEECEEEEECCEEEEECCCEEEEECCCEECCEEEEEEEEEECCCCCCCCEECCCCCCC
TGASNSLTGVSNSMTGCSSSFTGTSNSMTGSSHSMTGMSTSITGHSMSQTGSSSSITGDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
TSFTGSSVSSTGSSVSTTGVSTSTTGSSTSTTGCSVSTTGSSTSTTGNSVSMTGNSTSTT
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCC
GCSISTTGSSIGTVGSSISTTGSSVSTTGSSISTTGLSVSYTGAQYSDVGVDLKTVGMQS
CEEEEECCCCHHCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCEEEECCCCC
KN
CC
>Mature Secondary Structure
MQLIEIENEVLSGQDAFPLSFKTQEKVSGNPSYQLVFQVAEADLDLVSLLGEIIKVRIEL
CEEEEECHHHHCCCCCCCCCCCCHHHCCCCCCEEEEEEEECCCHHHHHHHHHHEEEEEEC
PDSAGYRTFFTYVIAGADEGQRQDKFVYSLELSTWTWFLMQNRNCRIFQDLNIIDIIEQV
CCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECEEEEEEEECCCCEEEECCCHHHHHHHH
FSKYNFADYRFDIVGNYRLREYCVQFAETDFDFVNRLMEDEGVWYYFEHNEDKHTLVMTD
HHHCCCCEEEEEEEECCHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCEEEEEEC
QQQFPVLEGHYAELSFLPDSEEMRAIREGIQRIQRSQRIHSSEIVLRDFDFLNPRNTLQT
CCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
HIEESRQHLQGVPLEWYDYAAGYTDPQHGESIARLRLEAIQSNGQLLSGESNATGLVPGR
HHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCEECCCC
SFALVQHPDNNRNRGFKLISCDYSFVQDGPDSASQGRNVACKFKALNDDVVYRPQCVTPP
EEEEEECCCCCCCCCEEEEEECCHHHCCCCCCHHCCCCEEEEEEECCCCEEECCCCCCCC
PKVPGVQSATVVGARESEVHTDKFARIRVHFHWDRYKTTEDDSSCWIRVVQAWAGKGWGV
CCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCE
LAMPRVGQEVLVNYVDGDLDRPMVTGIVYNGENPPPYRLPDHINYSGFVSRSLRFGQPQH
EECCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
ASQLTFDDNRGNERIMLHAERDLQRTVERNSATAVGQDKYDTVERTATEWINNHISYKDF
CCCCEECCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCE
SFSVTGMSVSATGISVSTTGTSLSVTGMSTSVTGVSVGFTLIDTSFTGVSTSFTGVGTSF
EEEEECEEEEECCEEEEECCCEEEEECCCEECCEEEEEEEEEECCCCCCCCEECCCCCCC
TGASNSLTGVSNSMTGCSSSFTGTSNSMTGSSHSMTGMSTSITGHSMSQTGSSSSITGDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
TSFTGSSVSSTGSSVSTTGVSTSTTGSSTSTTGCSVSTTGSSTSTTGNSVSMTGNSTSTT
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCC
GCSISTTGSSIGTVGSSISTTGSSVSTTGSSISTTGLSVSYTGAQYSDVGVDLKTVGMQS
CEEEEECCCCHHCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCEEEECCCCC
KN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA