| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170025772
Identifier: 170025772
GI number: 170025772
Start: 3914888
End: 3917107
Strand: Reverse
Name: 170025772
Synonym: YPK_3557
Alternate gene names: NA
Gene position: 3917107-3914888 (Counterclockwise)
Preceding gene: 170025773
Following gene: 170025771
Centisome position: 83.53
GC content: 49.77
Gene sequence:
>2220_bases ATGCGCATCATTCGCCCGCAACAGCTCGTGGTCTTGAAAAGCAGTTACCAGATAGGCCATGAAAGCCATATGGGGATCAG CGTCGTTGCTGGCTGTTATCTCTCTAAACCTGAGCATATGGTGACGGAGTCACAGATCTGGCAGGCATGGAAAGCGGCAC CGCTCTCTTTCCGCATGTTGGACAGTGCTGAGCCAAAACCCTTTGCTGAGTTTTTGCTGGCCGGTCATGCCGGTATTGGT GAAGAGGTTACCTCGCTGAGTGCAGAGGTTAGTGTTGGCTCATTGACCCGGCGCTGGTGTATTGAGGGCGAAAGCAACAA AACGGGTCTGGTCATTAAACCTTTCTTACGTATGTCGATGGACCATACGCAAAGTTGGGGGGGCAAAGGCTGTAAGGAGA ATCCACTGGGACGTGGGTATAACGATGAGCGCAAACCGACGATTATGTCTTTAGGCCTCGACGGCTCTGCTATCGTTCGC TCACCGCTGGCGTCTCCGTCACCTGTGCCTCATGACTTCCAACTGCGTAAAGTGCATATCAATGAAGTCGCCTCGACCAT GACCGATCCTCAATATTTGGAAACATTTTATCCCGGTTTGCCACCGCAAATTGATCGTCGCTATTTCCAAATGGCTCCGC CAGGGCAGTGGCTGAAGAAAAGCGCATGGCCCGATAGCGTGCCGTTCAAACTCATCGGTTTTCGCCCGGACAATGAGGAG ATCAGCGGTGCGTTTCCTGCGGTCAGTGCAAGGGCGTTTGTTTGGGATAACCCTTCAGCGCCCCCCAGTGAGGTGACCTT ACTGCGGAAAACACTGTGGCTGTTACCGGATAACGATATGGGGCTAATGGTGTTTACCGGCAGCGTGCCACTGACTCACC TTTTTGATGAGCCTATCGATACGTTGCTGGTGGGATTGGATGACTCCCATTCGCTACGTGAGTTGGAATATTACCAACAG GTCTATAAAAGTCGCAGCGTTGAAGGTGCTGCGAGTTTTGAATTCCTCAAAGATCCGGAACTGATGCCAGAGGGGATGCC GCTGAACGTCATCCGGGATTTGGCGGATCACCCAGACTCGCTGCGTTATAGCGCTTCCGCCATGTCTGAAGCGGAGTCCG AACGTTTCTATCAGGATGTTCAGGATGCTATCGATCGGCAGGAACAGCAGAAGAGTGAAGAACAAGAGACGCTGGGTGAT TTGAACGTCCCCGCAGCCGGTAAAGAGGAAGCGGGAACCCAATGGTTGGAAAGCAAAGAAGATACGGCAACCAACGTCAC ATTTTTAGGGACTGACTTCTCTGGAATGACCTTGGACAACAAGCAATTCCGCTATTGCATGTTTACCGGTTGCCATTTTG ACAAGGCGACATTTAAAGACTGCACCTTCGAGCATTGCCAGTTTACGCAAAGTGATTTTGAAAACTCCCGTTGGAACAAT GTGCATTTAAGTGGCTGTTTATTCAAACAGGCAGAGTGGCAAAAAGCCGCCTTTACCCACTGTAAATGGGAGAAATCCAC CTTTGAGTATGGGGTGTTTAAACACGCTCAGTTTACCGACAATGCGTTAGATAACTGCCTGATTAACCATAGTGATTTCA GCCTTGGCACGTTTGATCATTGTACGCTGAATGGCTGTTTCTTCTCCGAAACACATTGTGATCAAACACAATTTAATCAG GTCATCATCACGTCGTGCATATTCGAAAAATGCGACGGCCCGAAGGCTTGCTTTACCGAAAGCACAATAGAGAAAACCTC GTTTATTAGCAGCAGTTGGGTGGGGGGGCGCTTGAGTCATTGCTATCTCAATAGCTTGACCACGGGCCTGAATACCAATC TCTCTGAGTCGCATTTTGAGCAGTGCAGCCTGAATAAAATGGGCTTCCTCAAGGTCAATTTACAATCCAGTACCTTTATT AATTGCTCGATGTTGGAGAGTTGCTGCGATAAGGCTGATTTCTCTCAGGCGACGCTGATTGCCTGTGATATGACCGCGGT ACGGTTAAAAGATGCCAACTTAGTCCATAGCCACTGGCAGAACACCAGCTTACAGCAAAGCATGTTTTACAACGCTGACT TACGTGATGCCACTTTCCAGCGTTGCAATCTGGCGGGCGCTAATCTGGCGATGATCAGCCAAAACATGGACACCCGATTT GAACATTGTTTGACGGAAAAGACGCACTGGATCCCGCGTCGTTACACCGTCCCGGCATAA
Upstream 100 bases:
>100_bases CACGGGATTATCCGTCAGTTATACCGGCGCTCAATATTCCGATGTGGGTGTCGATCTGAAAACCGTTGGCATGCAAAGCA AAAACTGAAAAGGAAGCATT
Downstream 100 bases:
>100_bases ATATCACGTTTCAAAGGAGCATGGAATGACACCGTCCGACACCCCTATTATGCCTCCCGACAGTCCACGTCGGATTATTG GCCGGCACTTTACACAGCGT
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: Pentapeptide Repeat-Containing Protein; Secreted Protein; Pentapeptide Repeats Family Protein; Exported Protein
Number of amino acids: Translated: 739; Mature: 739
Protein sequence:
>739_residues MRIIRPQQLVVLKSSYQIGHESHMGISVVAGCYLSKPEHMVTESQIWQAWKAAPLSFRMLDSAEPKPFAEFLLAGHAGIG EEVTSLSAEVSVGSLTRRWCIEGESNKTGLVIKPFLRMSMDHTQSWGGKGCKENPLGRGYNDERKPTIMSLGLDGSAIVR SPLASPSPVPHDFQLRKVHINEVASTMTDPQYLETFYPGLPPQIDRRYFQMAPPGQWLKKSAWPDSVPFKLIGFRPDNEE ISGAFPAVSARAFVWDNPSAPPSEVTLLRKTLWLLPDNDMGLMVFTGSVPLTHLFDEPIDTLLVGLDDSHSLRELEYYQQ VYKSRSVEGAASFEFLKDPELMPEGMPLNVIRDLADHPDSLRYSASAMSEAESERFYQDVQDAIDRQEQQKSEEQETLGD LNVPAAGKEEAGTQWLESKEDTATNVTFLGTDFSGMTLDNKQFRYCMFTGCHFDKATFKDCTFEHCQFTQSDFENSRWNN VHLSGCLFKQAEWQKAAFTHCKWEKSTFEYGVFKHAQFTDNALDNCLINHSDFSLGTFDHCTLNGCFFSETHCDQTQFNQ VIITSCIFEKCDGPKACFTESTIEKTSFISSSWVGGRLSHCYLNSLTTGLNTNLSESHFEQCSLNKMGFLKVNLQSSTFI NCSMLESCCDKADFSQATLIACDMTAVRLKDANLVHSHWQNTSLQQSMFYNADLRDATFQRCNLAGANLAMISQNMDTRF EHCLTEKTHWIPRRYTVPA
Sequences:
>Translated_739_residues MRIIRPQQLVVLKSSYQIGHESHMGISVVAGCYLSKPEHMVTESQIWQAWKAAPLSFRMLDSAEPKPFAEFLLAGHAGIG EEVTSLSAEVSVGSLTRRWCIEGESNKTGLVIKPFLRMSMDHTQSWGGKGCKENPLGRGYNDERKPTIMSLGLDGSAIVR SPLASPSPVPHDFQLRKVHINEVASTMTDPQYLETFYPGLPPQIDRRYFQMAPPGQWLKKSAWPDSVPFKLIGFRPDNEE ISGAFPAVSARAFVWDNPSAPPSEVTLLRKTLWLLPDNDMGLMVFTGSVPLTHLFDEPIDTLLVGLDDSHSLRELEYYQQ VYKSRSVEGAASFEFLKDPELMPEGMPLNVIRDLADHPDSLRYSASAMSEAESERFYQDVQDAIDRQEQQKSEEQETLGD LNVPAAGKEEAGTQWLESKEDTATNVTFLGTDFSGMTLDNKQFRYCMFTGCHFDKATFKDCTFEHCQFTQSDFENSRWNN VHLSGCLFKQAEWQKAAFTHCKWEKSTFEYGVFKHAQFTDNALDNCLINHSDFSLGTFDHCTLNGCFFSETHCDQTQFNQ VIITSCIFEKCDGPKACFTESTIEKTSFISSSWVGGRLSHCYLNSLTTGLNTNLSESHFEQCSLNKMGFLKVNLQSSTFI NCSMLESCCDKADFSQATLIACDMTAVRLKDANLVHSHWQNTSLQQSMFYNADLRDATFQRCNLAGANLAMISQNMDTRF EHCLTEKTHWIPRRYTVPA >Mature_739_residues MRIIRPQQLVVLKSSYQIGHESHMGISVVAGCYLSKPEHMVTESQIWQAWKAAPLSFRMLDSAEPKPFAEFLLAGHAGIG EEVTSLSAEVSVGSLTRRWCIEGESNKTGLVIKPFLRMSMDHTQSWGGKGCKENPLGRGYNDERKPTIMSLGLDGSAIVR SPLASPSPVPHDFQLRKVHINEVASTMTDPQYLETFYPGLPPQIDRRYFQMAPPGQWLKKSAWPDSVPFKLIGFRPDNEE ISGAFPAVSARAFVWDNPSAPPSEVTLLRKTLWLLPDNDMGLMVFTGSVPLTHLFDEPIDTLLVGLDDSHSLRELEYYQQ VYKSRSVEGAASFEFLKDPELMPEGMPLNVIRDLADHPDSLRYSASAMSEAESERFYQDVQDAIDRQEQQKSEEQETLGD LNVPAAGKEEAGTQWLESKEDTATNVTFLGTDFSGMTLDNKQFRYCMFTGCHFDKATFKDCTFEHCQFTQSDFENSRWNN VHLSGCLFKQAEWQKAAFTHCKWEKSTFEYGVFKHAQFTDNALDNCLINHSDFSLGTFDHCTLNGCFFSETHCDQTQFNQ VIITSCIFEKCDGPKACFTESTIEKTSFISSSWVGGRLSHCYLNSLTTGLNTNLSESHFEQCSLNKMGFLKVNLQSSTFI NCSMLESCCDKADFSQATLIACDMTAVRLKDANLVHSHWQNTSLQQSMFYNADLRDATFQRCNLAGANLAMISQNMDTRF EHCLTEKTHWIPRRYTVPA
Specific function: Unknown
COG id: COG1357
COG function: function code S; Uncharacterized low-complexity proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83340; Mature: 83340
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIRPQQLVVLKSSYQIGHESHMGISVVAGCYLSKPEHMVTESQIWQAWKAAPLSFRML CCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEC DSAEPKPFAEFLLAGHAGIGEEVTSLSAEVSVGSLTRRWCIEGESNKTGLVIKPFLRMSM CCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHEECCCCCCCCEEEHHHHHHHH DHTQSWGGKGCKENPLGRGYNDERKPTIMSLGLDGSAIVRSPLASPSPVPHDFQLRKVHI HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEH NEVASTMTDPQYLETFYPGLPPQIDRRYFQMAPPGQWLKKSAWPDSVPFKLIGFRPDNEE HHHHHHCCCHHHHHHHCCCCCCHHHHHHEECCCCHHHHHHCCCCCCCCEEEEEECCCCCC ISGAFPAVSARAFVWDNPSAPPSEVTLLRKTLWLLPDNDMGLMVFTGSVPLTHLFDEPID CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHCCHH TLLVGLDDSHSLRELEYYQQVYKSRSVEGAASFEFLKDPELMPEGMPLNVIRDLADHPDS HEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCH LRYSASAMSEAESERFYQDVQDAIDRQEQQKSEEQETLGDLNVPAAGKEEAGTQWLESKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHCCC DTATNVTFLGTDFSGMTLDNKQFRYCMFTGCHFDKATFKDCTFEHCQFTQSDFENSRWNN CCCCEEEEEECCCCCCEECCCCEEEEEEECCCCCCCHHCCCCHHHHHCCHHHHCCCCCCE VHLSGCLFKQAEWQKAAFTHCKWEKSTFEYGVFKHAQFTDNALDNCLINHSDFSLGTFDH EEEEEEEECHHHHHHHHHHHCCCCCCCHHHCCEECCCCCHHHHHHHEECCCCCCCCCCCC CTLNGCFFSETHCDQTQFNQVIITSCIFEKCDGPKACFTESTIEKTSFISSSWVGGRLSH EEECCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHCCCCCCCHHH CYLNSLTTGLNTNLSESHFEQCSLNKMGFLKVNLQSSTFINCSMLESCCDKADFSQATLI HHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCEECHHHHHHHHCCCCCCCEEEE ACDMTAVRLKDANLVHSHWQNTSLQQSMFYNADLRDATFQRCNLAGANLAMISQNMDTRF EECCEEEEEECCHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHCCCCCCEEEEECCHHHHH EHCLTEKTHWIPRRYTVPA HHHHHHHHCCCCCCEECCC >Mature Secondary Structure MRIIRPQQLVVLKSSYQIGHESHMGISVVAGCYLSKPEHMVTESQIWQAWKAAPLSFRML CCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEC DSAEPKPFAEFLLAGHAGIGEEVTSLSAEVSVGSLTRRWCIEGESNKTGLVIKPFLRMSM CCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHEECCCCCCCCEEEHHHHHHHH DHTQSWGGKGCKENPLGRGYNDERKPTIMSLGLDGSAIVRSPLASPSPVPHDFQLRKVHI HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEH NEVASTMTDPQYLETFYPGLPPQIDRRYFQMAPPGQWLKKSAWPDSVPFKLIGFRPDNEE HHHHHHCCCHHHHHHHCCCCCCHHHHHHEECCCCHHHHHHCCCCCCCCEEEEEECCCCCC ISGAFPAVSARAFVWDNPSAPPSEVTLLRKTLWLLPDNDMGLMVFTGSVPLTHLFDEPID CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHCCHH TLLVGLDDSHSLRELEYYQQVYKSRSVEGAASFEFLKDPELMPEGMPLNVIRDLADHPDS HEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCH LRYSASAMSEAESERFYQDVQDAIDRQEQQKSEEQETLGDLNVPAAGKEEAGTQWLESKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHCCC DTATNVTFLGTDFSGMTLDNKQFRYCMFTGCHFDKATFKDCTFEHCQFTQSDFENSRWNN CCCCEEEEEECCCCCCEECCCCEEEEEEECCCCCCCHHCCCCHHHHHCCHHHHCCCCCCE VHLSGCLFKQAEWQKAAFTHCKWEKSTFEYGVFKHAQFTDNALDNCLINHSDFSLGTFDH EEEEEEEECHHHHHHHHHHHCCCCCCCHHHCCEECCCCCHHHHHHHEECCCCCCCCCCCC CTLNGCFFSETHCDQTQFNQVIITSCIFEKCDGPKACFTESTIEKTSFISSSWVGGRLSH EEECCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHCCCCCCCHHH CYLNSLTTGLNTNLSESHFEQCSLNKMGFLKVNLQSSTFINCSMLESCCDKADFSQATLI HHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCEECHHHHHHHHCCCCCCCEEEE ACDMTAVRLKDANLVHSHWQNTSLQQSMFYNADLRDATFQRCNLAGANLAMISQNMDTRF EECCEEEEEECCHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHCCCCCCEEEEECCHHHHH EHCLTEKTHWIPRRYTVPA HHHHHHHHCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA