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The map label for this gene is yadH [H]

Identifier: 170025691

GI number: 170025691

Start: 3818521

End: 3819291

Strand: Reverse

Name: yadH [H]

Synonym: YPK_3476

Alternate gene names: 170025691

Gene position: 3819291-3818521 (Counterclockwise)

Preceding gene: 170025692

Following gene: 170025690

Centisome position: 81.44

GC content: 48.25

Gene sequence:

>771_bases
ATGACCCGCCTGTATTGGATAGCCTTGCAGAGTATTTGGATCAAAGAGATTACGCGGTTTGCACGTATTTGGATTCAAAC
CCTGGTGCCACCTGTGATTACGATGTCTCTCTATTTTGTTATTTTCGGCAACCTAATTGGTGCCCGGATTGGCGATATGG
GGGGCTTTGATTACATGCAGTTTATCGTCCCTGGCTTGATTATGATGGCGGTGATCACTAACGCCTATTCTAACGTGGCG
GCATCGTTCTACGGGGCGAAGTTTCAGCGCAGTATCGAAGAGTTGCTGGTAGCCCCTGTGCCTACGCATATTGTTATTAT
CGGTTATGTCGGTGGTGGGGTGGCGCGCGGCATTTGTGTCGGCATTCTGGTGACGATTATCTCGTTATTCTTCGTGCCAC
TGCATGTCCATTCGTGGCCAATGATTGCCTTGACGCTGATACTAACGGCCATTCTATTCTCCCTGGGAGGATTGTTGAAT
GCAGTCTTTGCCAAGACATTTGATGACATCAGTTTGGTACCGACTTTTGTGCTGACGCCATTGACCTATCTGGGAGGGGT
ATTTTATTCGTTATCATTATTGCCACCTTTCTGGCAGGCAGTCTCGAAGCTTAACCCTATCGTCTATATGATCAGCGGTT
TCCGTTATGGGTTCCTCGGTATTACTGATGTCTCACTGGCCTACACCATTGGCGTTTTAGTGGTGTTTATCGCGGTATTC
TATGCGTGGGCGTGGTATTTGATTGAGCGTGGAACCGGGTTACGGACCTAA

Upstream 100 bases:

>100_bases
TGAACGTACAGGGGGTTCAGGTACAAAGTATGCGTAACAAGGCCAACCGTCTGGAAGAGCTGTTTGTCACCTTGGTTAAT
GGCCACGAGGGAGAGAAAGC

Downstream 100 bases:

>100_bases
TATATTCCCTTTGTCCTTGGCGCTACAGCGGCGCTCGTTTGCTGACTTGCTGTAACGCCAAGGGCTTTGCAATGTGGGTA
TATAAATAAATCGTGCTGTT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTRLYWIALQSIWIKEITRFARIWIQTLVPPVITMSLYFVIFGNLIGARIGDMGGFDYMQFIVPGLIMMAVITNAYSNVA
ASFYGAKFQRSIEELLVAPVPTHIVIIGYVGGGVARGICVGILVTIISLFFVPLHVHSWPMIALTLILTAILFSLGGLLN
AVFAKTFDDISLVPTFVLTPLTYLGGVFYSLSLLPPFWQAVSKLNPIVYMISGFRYGFLGITDVSLAYTIGVLVVFIAVF
YAWAWYLIERGTGLRT

Sequences:

>Translated_256_residues
MTRLYWIALQSIWIKEITRFARIWIQTLVPPVITMSLYFVIFGNLIGARIGDMGGFDYMQFIVPGLIMMAVITNAYSNVA
ASFYGAKFQRSIEELLVAPVPTHIVIIGYVGGGVARGICVGILVTIISLFFVPLHVHSWPMIALTLILTAILFSLGGLLN
AVFAKTFDDISLVPTFVLTPLTYLGGVFYSLSLLPPFWQAVSKLNPIVYMISGFRYGFLGITDVSLAYTIGVLVVFIAVF
YAWAWYLIERGTGLRT
>Mature_255_residues
TRLYWIALQSIWIKEITRFARIWIQTLVPPVITMSLYFVIFGNLIGARIGDMGGFDYMQFIVPGLIMMAVITNAYSNVAA
SFYGAKFQRSIEELLVAPVPTHIVIIGYVGGGVARGICVGILVTIISLFFVPLHVHSWPMIALTLILTAILFSLGGLLNA
VFAKTFDDISLVPTFVLTPLTYLGGVFYSLSLLPPFWQAVSKLNPIVYMISGFRYGFLGITDVSLAYTIGVLVVFIAVFY
AWAWYLIERGTGLRT

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=256, Percent_Identity=80.078125, Blast_Score=414, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28384; Mature: 28253

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TRLYWIALQSIWIKEITRFARIWIQTLVPPVITMSLYFVIFGNLIGARIGDMGGFDYMQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
FIVPGLIMMAVITNAYSNVAASFYGAKFQRSIEELLVAPVPTHIVIIGYVGGGVARGICV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHH
GILVTIISLFFVPLHVHSWPMIALTLILTAILFSLGGLLNAVFAKTFDDISLVPTFVLTP
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LTYLGGVFYSLSLLPPFWQAVSKLNPIVYMISGFRYGFLGITDVSLAYTIGVLVVFIAVF
HHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YAWAWYLIERGTGLRT
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]