| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is fhuB [H]
Identifier: 170025675
GI number: 170025675
Start: 3799266
End: 3801263
Strand: Reverse
Name: fhuB [H]
Synonym: YPK_3460
Alternate gene names: 170025675
Gene position: 3801263-3799266 (Counterclockwise)
Preceding gene: 170025676
Following gene: 170025673
Centisome position: 81.06
GC content: 54.75
Gene sequence:
>1998_bases ATGAGCGCCATAAGTTTACGCCAGGGTTGGCGGCTCCCTGCGGGTCTACTTGGCCTACTGGTGGTTATTGCCGTTTCCCT GACATTTTATAACCTCAGTCAATTACTGCCTTCCTCTCTCTGGTCTGAAGCCCTATGGCGACCTGATCGAGACGATGTAC GCCAGATGCTATTTCATTACAGCCAATTACCTCGCCTAGCGGTGGCATTACTCACCGGAGCGGGGCTGGGGCTGGTAGGG GTTTTATTTCAACAAGTTCTGCGTAATCCCCTGGCTGAACCGGCCACTCTGGGGGTTGCTGCGGGTGCCCAGTTAGGGCT AACGATAGCCACACTGTGGATGTTACCCGGTGGTGAGTTAACCCGGCAACTGGCGGCAATGGCCGGTGGTATGACGGTTG GGGCACTGGTCTTTGGCGTAGCCTGGGGGAAGCGCCTGTCACCGGTGACATTGATTTTGGCCGGTCTGGTGTTGGGGCTT TACTGTAGCGCGGTGAGTAACCTACTGGCACTGTTCAATTATGACCAGTTACAGGGGTTGTTTTTGTGGAGCAGTGGCGC ACTGAATCAGCAGGATTGGAGTACGGTACAGTTTCTGTTACCGCGCTTACTGATTAGCGGCATATTGGCGGCCTTCTTGA TTCGTCCGTTGACCCTCTTGGGGTTAGATGATGGTGTCGCCCGCAATCTGGGGTTAGGGCTGTCACTGGCCCGCCTGAGT GCGCTGGGATTAGCCATTATATTCAGCGCCATGTTGGTTAATGCGGTGGGTGTGATTGGTTTTATCGGGCTGTTTGCACC ATTGTTGGCGAAAATTTTGGGGGCACGGCGCTTATCACAACGTCTGATACTGGCCCCTATTGTAGGGGCATTGCTGCTCT GGGTGACGGACCAGGGCATCATCTGGCTGACACAAGTCTGGCGAGAGATCCCAACCGGTGCCGCTACGGCGCTGATTGGT GCGCCATTGTTATTGTGGTTGTTGCCTCGCTTACACAGTACGACTGCGCCAAACATGGATTTGGGTGACTCGGTTCCGGT AGAGCGGCAGCGTTTAGGATTATGGATCAGTGCGGGTTTGCTGCTGCTGTTGGGGGGATTGATCGTAGCGCTGATGTTTG GCCGTGATAGCCAAGGTTGGCGCTGGATCGTCGGTGATGAATTACAGGCGCTGTTACATTGGCGCTGGCCACGGGTATTG GCGGCACTGGCTGCCGGTATGATGCTGGCGGTTGCGGGAACATTAATTCAAAAGTTGACTGGTAACCCGATGGCCAGCCC GGAAGTGTTGGGTATCAGCTCTGGTGCAGCTTTCGGCGTGGTCATTATGTTGTTTATCGTCCCTGGTAATGCACTGGAAT GGTTGTTGCCTGCGGGGAGCCTAGGGGCTGCCATCACGCTATTGCTGATCATGGTTGTTGCTGGGCGAGGCGGGTTTTCT CCGGGCAGGATGCTATTGGCAGGGATTGCATTGAGTACCGCTTTTACCACGGTGATCACCATGTTGCTGGCCAGTGGCGA CCCACGGATGCGCGGGTTGCTGGCATGGATTTCTGGCTCAACTTATTCTGTTGAGGGCTCACAAGCGTTGACGACAGGCT TAATTGCCGTGGTGTTGATAGCACTAGCCCCTTTGTGCCGCCGTTGGTTAATGATTTTGCCATTAGGCAGTGTGACCGCC AGAGCATTAGGGATGGCTCTGGCCCCCAGCCGGTTAGCGATTTTATTATTGGCAGCCACATTGACGGCGGCGGCGACCCT GACCGTCGGGCCGTTGAGTTTTGTGGGATTGATGGCTCCGCATATGGCCCGGATGCTGGGTTTCCGTCGTGCTATTCCGC AACTGATTATTGCGGCTATTTTGGGCGGATTATTGATGATATTAGCTGATTGGTGTGGGCGGATGCTGTTGTTCCCAAAT CAGATCCCCGCAGGCCTATTAGCGACATTTATCGGGGCGCCCTATTTTGTTTATTTGCTGCGCAAACAGGGGCGGTAA
Upstream 100 bases:
>100_bases AAAACCAATTACGTCTCTTGCCACCGGTTTGGTTCTACGGCGCGACACTGTCAGCTATGCGTTTCGTTCGTTTACTGGAA CAGGCGTGGGGGAAAGCACC
Downstream 100 bases:
>100_bases TTTTATCAGGCGAATGCCCTGCTAATTTGACGCCGCCGCGTGACTATTCTGCCTATCCTCACCGTTTCAGATCGCGTCAT TGAGGGTTGTCAGCAGTCTG
Product: iron-hydroxamate transporter permease subunit
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein fhuB; Ferrichrome uptake protein fhuB; Iron(III)-hydroxamate import system permease protein fhuB [H]
Number of amino acids: Translated: 665; Mature: 664
Protein sequence:
>665_residues MSAISLRQGWRLPAGLLGLLVVIAVSLTFYNLSQLLPSSLWSEALWRPDRDDVRQMLFHYSQLPRLAVALLTGAGLGLVG VLFQQVLRNPLAEPATLGVAAGAQLGLTIATLWMLPGGELTRQLAAMAGGMTVGALVFGVAWGKRLSPVTLILAGLVLGL YCSAVSNLLALFNYDQLQGLFLWSSGALNQQDWSTVQFLLPRLLISGILAAFLIRPLTLLGLDDGVARNLGLGLSLARLS ALGLAIIFSAMLVNAVGVIGFIGLFAPLLAKILGARRLSQRLILAPIVGALLLWVTDQGIIWLTQVWREIPTGAATALIG APLLLWLLPRLHSTTAPNMDLGDSVPVERQRLGLWISAGLLLLLGGLIVALMFGRDSQGWRWIVGDELQALLHWRWPRVL AALAAGMMLAVAGTLIQKLTGNPMASPEVLGISSGAAFGVVIMLFIVPGNALEWLLPAGSLGAAITLLLIMVVAGRGGFS PGRMLLAGIALSTAFTTVITMLLASGDPRMRGLLAWISGSTYSVEGSQALTTGLIAVVLIALAPLCRRWLMILPLGSVTA RALGMALAPSRLAILLLAATLTAAATLTVGPLSFVGLMAPHMARMLGFRRAIPQLIIAAILGGLLMILADWCGRMLLFPN QIPAGLLATFIGAPYFVYLLRKQGR
Sequences:
>Translated_665_residues MSAISLRQGWRLPAGLLGLLVVIAVSLTFYNLSQLLPSSLWSEALWRPDRDDVRQMLFHYSQLPRLAVALLTGAGLGLVG VLFQQVLRNPLAEPATLGVAAGAQLGLTIATLWMLPGGELTRQLAAMAGGMTVGALVFGVAWGKRLSPVTLILAGLVLGL YCSAVSNLLALFNYDQLQGLFLWSSGALNQQDWSTVQFLLPRLLISGILAAFLIRPLTLLGLDDGVARNLGLGLSLARLS ALGLAIIFSAMLVNAVGVIGFIGLFAPLLAKILGARRLSQRLILAPIVGALLLWVTDQGIIWLTQVWREIPTGAATALIG APLLLWLLPRLHSTTAPNMDLGDSVPVERQRLGLWISAGLLLLLGGLIVALMFGRDSQGWRWIVGDELQALLHWRWPRVL AALAAGMMLAVAGTLIQKLTGNPMASPEVLGISSGAAFGVVIMLFIVPGNALEWLLPAGSLGAAITLLLIMVVAGRGGFS PGRMLLAGIALSTAFTTVITMLLASGDPRMRGLLAWISGSTYSVEGSQALTTGLIAVVLIALAPLCRRWLMILPLGSVTA RALGMALAPSRLAILLLAATLTAAATLTVGPLSFVGLMAPHMARMLGFRRAIPQLIIAAILGGLLMILADWCGRMLLFPN QIPAGLLATFIGAPYFVYLLRKQGR >Mature_664_residues SAISLRQGWRLPAGLLGLLVVIAVSLTFYNLSQLLPSSLWSEALWRPDRDDVRQMLFHYSQLPRLAVALLTGAGLGLVGV LFQQVLRNPLAEPATLGVAAGAQLGLTIATLWMLPGGELTRQLAAMAGGMTVGALVFGVAWGKRLSPVTLILAGLVLGLY CSAVSNLLALFNYDQLQGLFLWSSGALNQQDWSTVQFLLPRLLISGILAAFLIRPLTLLGLDDGVARNLGLGLSLARLSA LGLAIIFSAMLVNAVGVIGFIGLFAPLLAKILGARRLSQRLILAPIVGALLLWVTDQGIIWLTQVWREIPTGAATALIGA PLLLWLLPRLHSTTAPNMDLGDSVPVERQRLGLWISAGLLLLLGGLIVALMFGRDSQGWRWIVGDELQALLHWRWPRVLA ALAAGMMLAVAGTLIQKLTGNPMASPEVLGISSGAAFGVVIMLFIVPGNALEWLLPAGSLGAAITLLLIMVVAGRGGFSP GRMLLAGIALSTAFTTVITMLLASGDPRMRGLLAWISGSTYSVEGSQALTTGLIAVVLIALAPLCRRWLMILPLGSVTAR ALGMALAPSRLAILLLAATLTAAATLTVGPLSFVGLMAPHMARMLGFRRAIPQLIIAAILGGLLMILADWCGRMLLFPNQ IPAGLLATFIGAPYFVYLLRKQGR
Specific function: Part of the ABC transporter complex fhuCDB involved in iron(3+)-hydroxamate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786347, Length=645, Percent_Identity=68.3720930232558, Blast_Score=778, Evalue=0.0, Organism=Escherichia coli, GI1790741, Length=282, Percent_Identity=37.5886524822695, Blast_Score=125, Evalue=1e-29, Organism=Escherichia coli, GI1790740, Length=309, Percent_Identity=33.0097087378641, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1786805, Length=288, Percent_Identity=34.375, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI1786804, Length=322, Percent_Identity=32.2981366459627, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1788004, Length=273, Percent_Identity=31.1355311355311, Blast_Score=97, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 - InterPro: IPR006311 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 70356; Mature: 70225
Theoretical pI: Translated: 11.65; Mature: 11.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAISLRQGWRLPAGLLGLLVVIAVSLTFYNLSQLLPSSLWSEALWRPDRDDVRQMLFHY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SQLPRLAVALLTGAGLGLVGVLFQQVLRNPLAEPATLGVAAGAQLGLTIATLWMLPGGEL HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHCCCHHH TRQLAAMAGGMTVGALVFGVAWGKRLSPVTLILAGLVLGLYCSAVSNLLALFNYDQLQGL HHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCEE FLWSSGALNQQDWSTVQFLLPRLLISGILAAFLIRPLTLLGLDDGVARNLGLGLSLARLS EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHH ALGLAIIFSAMLVNAVGVIGFIGLFAPLLAKILGARRLSQRLILAPIVGALLLWVTDQGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH IWLTQVWREIPTGAATALIGAPLLLWLLPRLHSTTAPNMDLGDSVPVERQRLGLWISAGL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH LLLLGGLIVALMFGRDSQGWRWIVGDELQALLHWRWPRVLAALAAGMMLAVAGTLIQKLT HHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GNPMASPEVLGISSGAAFGVVIMLFIVPGNALEWLLPAGSLGAAITLLLIMVVAGRGGFS CCCCCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC PGRMLLAGIALSTAFTTVITMLLASGDPRMRGLLAWISGSTYSVEGSQALTTGLIAVVLI HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHH ALAPLCRRWLMILPLGSVTARALGMALAPSRLAILLLAATLTAAATLTVGPLSFVGLMAP HHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMARMLGFRRAIPQLIIAAILGGLLMILADWCGRMLLFPNQIPAGLLATFIGAPYFVYLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHH RKQGR HHCCC >Mature Secondary Structure SAISLRQGWRLPAGLLGLLVVIAVSLTFYNLSQLLPSSLWSEALWRPDRDDVRQMLFHY CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SQLPRLAVALLTGAGLGLVGVLFQQVLRNPLAEPATLGVAAGAQLGLTIATLWMLPGGEL HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHCCCHHH TRQLAAMAGGMTVGALVFGVAWGKRLSPVTLILAGLVLGLYCSAVSNLLALFNYDQLQGL HHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCEE FLWSSGALNQQDWSTVQFLLPRLLISGILAAFLIRPLTLLGLDDGVARNLGLGLSLARLS EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHH ALGLAIIFSAMLVNAVGVIGFIGLFAPLLAKILGARRLSQRLILAPIVGALLLWVTDQGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH IWLTQVWREIPTGAATALIGAPLLLWLLPRLHSTTAPNMDLGDSVPVERQRLGLWISAGL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH LLLLGGLIVALMFGRDSQGWRWIVGDELQALLHWRWPRVLAALAAGMMLAVAGTLIQKLT HHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GNPMASPEVLGISSGAAFGVVIMLFIVPGNALEWLLPAGSLGAAITLLLIMVVAGRGGFS CCCCCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC PGRMLLAGIALSTAFTTVITMLLASGDPRMRGLLAWISGSTYSVEGSQALTTGLIAVVLI HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHH ALAPLCRRWLMILPLGSVTARALGMALAPSRLAILLLAATLTAAATLTVGPLSFVGLMAP HHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMARMLGFRRAIPQLIIAAILGGLLMILADWCGRMLLFPNQIPAGLLATFIGAPYFVYLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHH RKQGR HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 10103258 [H]