| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is cysC [H]
Identifier: 170025649
GI number: 170025649
Start: 3766318
End: 3767022
Strand: Reverse
Name: cysC [H]
Synonym: YPK_3434
Alternate gene names: 170025649
Gene position: 3767022-3766318 (Counterclockwise)
Preceding gene: 170025650
Following gene: 170025648
Centisome position: 80.33
GC content: 50.92
Gene sequence:
>705_bases ATGCCTTGGTTCGCCGTCATTTCCCACATTGGGGTGCGCGTGATCTGCTGGGGGGGAAATAGCGTGCCAGCCCATCAGTT AGATGACCATAACCAAGAAACGCGGTCAGACGATGAGAATATCGTCTGGCACCCCCATGCGATCACCCGACAGGATCGCG AACAACAGCACGGTCATCAGGGCGTAGTTCTTTGGTTTACCGGCCTGTCGGGTTCCGGGAAATCCACTCTGGCCGGTGCG CTGGAACAAGCGTTGTTCGCTCGCGGTGTCAGTACTTACTTACTGGATGGTGATAACGTGCGCCATGGCCTCTGCCGCGA TTTGGGCTTTTCTGACGCTGATCGTCGTGAAAATATCCGGCGGGTTGGCGAGGTGGCTAAACTGATGGTTGATGCCGGTC TGGTGGTCTTGACGGCGTTTATTTCCCCTCATCGGGCTGAACGGAAAATGGTACAAGATATGCTGGCATCGGGTCAGTTT ATTGAGGTATTTGTCGATACGCCGTTAGCAATTTGTGAGGCCCGTGACCCGAAAGGCTTATACAAAAAAGCCCGTGCCGG AGAGCTTAAAAATTTTACAGGGATCGATTCAGTTTATGAATCGCCTGCGTCTCCTGATATCCATTTGCAGGGTGAACAAT TAGTAACAAATTTGATTGAACAATTGTTAGACGTACTGCGTGGTAGAGCTATTATCAAATCCTAA
Upstream 100 bases:
>100_bases CGGCTGAGTAATGTCACTGTCGGTGCGGGGTTGGTCCGTGAAGCGCTGGCGTCGGTTTATCAGGAGAATCATGACTTCAG TACCTTTGAGCTGGAATTAA
Downstream 100 bases:
>100_bases ACGTATCCCCTTCGCACTTGACGCTACAGGGTCGTTCGCTGCAGGTATTCACTCGAATCACTGACGTTGTCAGCTAGCCG TGATTTATTTGCAGCCTACC
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MPWFAVISHIGVRVICWGGNSVPAHQLDDHNQETRSDDENIVWHPHAITRQDREQQHGHQGVVLWFTGLSGSGKSTLAGA LEQALFARGVSTYLLDGDNVRHGLCRDLGFSDADRRENIRRVGEVAKLMVDAGLVVLTAFISPHRAERKMVQDMLASGQF IEVFVDTPLAICEARDPKGLYKKARAGELKNFTGIDSVYESPASPDIHLQGEQLVTNLIEQLLDVLRGRAIIKS
Sequences:
>Translated_234_residues MPWFAVISHIGVRVICWGGNSVPAHQLDDHNQETRSDDENIVWHPHAITRQDREQQHGHQGVVLWFTGLSGSGKSTLAGA LEQALFARGVSTYLLDGDNVRHGLCRDLGFSDADRRENIRRVGEVAKLMVDAGLVVLTAFISPHRAERKMVQDMLASGQF IEVFVDTPLAICEARDPKGLYKKARAGELKNFTGIDSVYESPASPDIHLQGEQLVTNLIEQLLDVLRGRAIIKS >Mature_233_residues PWFAVISHIGVRVICWGGNSVPAHQLDDHNQETRSDDENIVWHPHAITRQDREQQHGHQGVVLWFTGLSGSGKSTLAGAL EQALFARGVSTYLLDGDNVRHGLCRDLGFSDADRRENIRRVGEVAKLMVDAGLVVLTAFISPHRAERKMVQDMLASGQFI EVFVDTPLAICEARDPKGLYKKARAGELKNFTGIDSVYESPASPDIHLQGEQLVTNLIEQLLDVLRGRAIIKS
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI34447231, Length=213, Percent_Identity=46.9483568075117, Blast_Score=198, Evalue=3e-51, Organism=Homo sapiens, GI62912492, Length=213, Percent_Identity=46.9483568075117, Blast_Score=198, Evalue=4e-51, Organism=Homo sapiens, GI46094058, Length=200, Percent_Identity=49, Blast_Score=198, Evalue=4e-51, Organism=Escherichia coli, GI1789107, Length=197, Percent_Identity=80.2030456852792, Blast_Score=330, Evalue=4e-92, Organism=Caenorhabditis elegans, GI17542422, Length=200, Percent_Identity=49, Blast_Score=194, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6322852, Length=176, Percent_Identity=52.2727272727273, Blast_Score=199, Evalue=4e-52, Organism=Drosophila melanogaster, GI24667032, Length=174, Percent_Identity=50, Blast_Score=177, Evalue=4e-45, Organism=Drosophila melanogaster, GI24667028, Length=174, Percent_Identity=50, Blast_Score=177, Evalue=4e-45, Organism=Drosophila melanogaster, GI24667036, Length=174, Percent_Identity=50, Blast_Score=177, Evalue=4e-45, Organism=Drosophila melanogaster, GI24667040, Length=174, Percent_Identity=50, Blast_Score=177, Evalue=5e-45, Organism=Drosophila melanogaster, GI116007838, Length=174, Percent_Identity=50, Blast_Score=177, Evalue=6e-45, Organism=Drosophila melanogaster, GI24667044, Length=174, Percent_Identity=50, Blast_Score=177, Evalue=6e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 25912; Mature: 25781
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWFAVISHIGVRVICWGGNSVPAHQLDDHNQETRSDDENIVWHPHAITRQDREQQHGHQ CCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHCCCCCCEEECCCHHHHHHHHHHCCCC GVVLWFTGLSGSGKSTLAGALEQALFARGVSTYLLDGDNVRHGLCRDLGFSDADRRENIR CEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHCCCCCCHHHHHHH RVGEVAKLMVDAGLVVLTAFISPHRAERKMVQDMLASGQFIEVFVDTPLAICEARDPKGL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCHHH YKKARAGELKNFTGIDSVYESPASPDIHLQGEQLVTNLIEQLLDVLRGRAIIKS HHHHHCCCCCCCCCCHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure PWFAVISHIGVRVICWGGNSVPAHQLDDHNQETRSDDENIVWHPHAITRQDREQQHGHQ CHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHCCCCCCEEECCCHHHHHHHHHHCCCC GVVLWFTGLSGSGKSTLAGALEQALFARGVSTYLLDGDNVRHGLCRDLGFSDADRRENIR CEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHCCCCCCHHHHHHH RVGEVAKLMVDAGLVVLTAFISPHRAERKMVQDMLASGQFIEVFVDTPLAICEARDPKGL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCHHH YKKARAGELKNFTGIDSVYESPASPDIHLQGEQLVTNLIEQLLDVLRGRAIIKS HHHHHCCCCCCCCCCHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]