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The map label for this gene is ygbE [H]

Identifier: 170025648

GI number: 170025648

Start: 3765810

End: 3766127

Strand: Reverse

Name: ygbE [H]

Synonym: YPK_3433

Alternate gene names: 170025648

Gene position: 3766127-3765810 (Counterclockwise)

Preceding gene: 170025649

Following gene: 170025647

Centisome position: 80.31

GC content: 50.0

Gene sequence:

>318_bases
ATGCAGAATGTCACCCAAATTATGAACGATGAGCAGCAAGAAGAGGAAGAGCCGTCTTACTCCTTCTCTGGTGGCGTCAC
AGGTTTTGTTTTCTACTGGTTGGCATTTGCGATCCCTTTCTTTGTCTATGGTCCCAACACCGTCTTTTTCCTGCTGTACA
CTTGGCCGTTCTTTCTGGCGTTGATGCCCGTTTCGGTACTGATAGGTATCGCGTTGGGTATGCTATCCCGTGGTCATCTG
CTGTTTACTATTGGTGGGACGGGGATCGCCGTGGTGTGCCTCTTCTGGATGCTGTTTTCACTGCTTACGGGTTGGTGA

Upstream 100 bases:

>100_bases
GCAGCCTACCTGACGACAATGACTTTGGGTACAGATGCACTTCTGCTACAGGGAAGGCGTCCTTAGAACGTGTCGGTAAA
CTGTGCCTACAGGGGTTTCC

Downstream 100 bases:

>100_bases
ACGCTTCATTTACCCGATGATTCCCCTCTCCTGAAACACACTCTAAATATCCCATATTCTCTTCGCTTTTGACGCTGCAG
GGGGGGGGGGCTTTTACTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MQNVTQIMNDEQQEEEEPSYSFSGGVTGFVFYWLAFAIPFFVYGPNTVFFLLYTWPFFLALMPVSVLIGIALGMLSRGHL
LFTIGGTGIAVVCLFWMLFSLLTGW

Sequences:

>Translated_105_residues
MQNVTQIMNDEQQEEEEPSYSFSGGVTGFVFYWLAFAIPFFVYGPNTVFFLLYTWPFFLALMPVSVLIGIALGMLSRGHL
LFTIGGTGIAVVCLFWMLFSLLTGW
>Mature_105_residues
MQNVTQIMNDEQQEEEEPSYSFSGGVTGFVFYWLAFAIPFFVYGPNTVFFLLYTWPFFLALMPVSVLIGIALGMLSRGHL
LFTIGGTGIAVVCLFWMLFSLLTGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789106, Length=103, Percent_Identity=47.5728155339806, Blast_Score=94, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022721 [H]

Pfam domain/function: PF12084 DUF3561 [H]

EC number: NA

Molecular weight: Translated: 11851; Mature: 11851

Theoretical pI: Translated: 3.87; Mature: 3.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNVTQIMNDEQQEEEEPSYSFSGGVTGFVFYWLAFAIPFFVYGPNTVFFLLYTWPFFLA
CCCHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LMPVSVLIGIALGMLSRGHLLFTIGGTGIAVVCLFWMLFSLLTGW
HHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQNVTQIMNDEQQEEEEPSYSFSGGVTGFVFYWLAFAIPFFVYGPNTVFFLLYTWPFFLA
CCCHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LMPVSVLIGIALGMLSRGHLLFTIGGTGIAVVCLFWMLFSLLTGW
HHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 1316900; 7567469 [H]