| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170025104
Identifier: 170025104
GI number: 170025104
Start: 3177827
End: 3178930
Strand: Reverse
Name: 170025104
Synonym: YPK_2880
Alternate gene names: NA
Gene position: 3178930-3177827 (Counterclockwise)
Preceding gene: 170025107
Following gene: 170025103
Centisome position: 67.79
GC content: 47.55
Gene sequence:
>1104_bases ATGAAAGAATCTGAGGTACTGGCCGAAGTCAGTAATGAAAACCAGACATTGGTTGCAGTCGTGCAACAAGACCTGAGGGT CGTTTATTTTTATATTTACCCGCAAGAAGCATTCGAAGAGCGCTTCCCAGTCCGTGCTTGCTGGGTGAGAAATCGGGTTG CCGCGCCTCAGTCAACCGATAATATGGCAATGGAACAAGGGGTGGCGCCGCGCCTGGCCGCAGAGTTCTGCCGTAATATC GCTGGTGAGGCTGAGCTTGATCCACAATTTATTTCGATTATCTGGTCAGAAAGTGATGACGGTGCAGCACTATGGTATCA GGGGCAATTACTGGCAATCATCCCAGGCTGGAGTTTATATATTGACCATTCCATTTGCTATTCAGCCAGTTGCATCAAAG ACAATCCGCTGGTGTTGCCTCTTGGGTCTGCTTCGACCAATACGCAATATGCCCTTGCGCAGCACACACGCCAATTTTGG CGACGCTGGCAGCAGGAAGAGGGGAATCCATGGCCCCTCTTGCAAACGGAATATATTCAATGCTATGAGCAGCATTTTGG TCCATCGGTAAAATATTATGCGATCGATCAGGGAAAATGGCCTCCAATGGCGATATCTCAGCATGAAAAAGAGGGGATAT ATTATTTTTTGACGATTGGTGTCAGTATTCGCCCACAACCTTGGGTTGAAATATTATTTAATGATGATGCCAGCCAATAC CGGCGCATGGAAATGGCATTGGCTATTGATGGGCAATATGTCAATGAGGATAACGCTATTCATATGGCCAGTGCTCTGGC CGGGTTTGCGCATGTTCCCTGGAATAAAATAACCTGGTTAGGTGAGGGGCATACCTTAGAATCTGCAGTCGCCCCTCAGG GATATGAGGGCTATATTTTATCATCAGCGCTCTATGCTGATGCAGACCATCTTACATTGCCCCATCAGCAGGACGATCCG GTCAATATATATTGGGCCAGTCCTATTTTTACCCGTGAGCGAGAGCTTGCCCATAGCGTGCCAAACGGTGGCTCTGATTT GTTAAAAAAATTACAGCAGCAAGGGGTTAATCATATTTTCTCCCCGCGCCAAGCCGTTATTTAG
Upstream 100 bases:
>100_bases CGTTTTACACTGTCAGTATGGAATTATTGAGCTAATTTTATTTTACGGCAGGCAATAAGAGCATTTACCTAAAACCCCTT GCCGATACAGTTGAGGCGCT
Downstream 100 bases:
>100_bases GTGATACTGAATCAGTACCGCGGCCTGATTTGCAGATTCGGTGATTCGGGTCTTAACTTAATCAGGTCATCGCTGTTGTT TGAGACTGTCTGCTTAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MKESEVLAEVSNENQTLVAVVQQDLRVVYFYIYPQEAFEERFPVRACWVRNRVAAPQSTDNMAMEQGVAPRLAAEFCRNI AGEAELDPQFISIIWSESDDGAALWYQGQLLAIIPGWSLYIDHSICYSASCIKDNPLVLPLGSASTNTQYALAQHTRQFW RRWQQEEGNPWPLLQTEYIQCYEQHFGPSVKYYAIDQGKWPPMAISQHEKEGIYYFLTIGVSIRPQPWVEILFNDDASQY RRMEMALAIDGQYVNEDNAIHMASALAGFAHVPWNKITWLGEGHTLESAVAPQGYEGYILSSALYADADHLTLPHQQDDP VNIYWASPIFTRERELAHSVPNGGSDLLKKLQQQGVNHIFSPRQAVI
Sequences:
>Translated_367_residues MKESEVLAEVSNENQTLVAVVQQDLRVVYFYIYPQEAFEERFPVRACWVRNRVAAPQSTDNMAMEQGVAPRLAAEFCRNI AGEAELDPQFISIIWSESDDGAALWYQGQLLAIIPGWSLYIDHSICYSASCIKDNPLVLPLGSASTNTQYALAQHTRQFW RRWQQEEGNPWPLLQTEYIQCYEQHFGPSVKYYAIDQGKWPPMAISQHEKEGIYYFLTIGVSIRPQPWVEILFNDDASQY RRMEMALAIDGQYVNEDNAIHMASALAGFAHVPWNKITWLGEGHTLESAVAPQGYEGYILSSALYADADHLTLPHQQDDP VNIYWASPIFTRERELAHSVPNGGSDLLKKLQQQGVNHIFSPRQAVI >Mature_367_residues MKESEVLAEVSNENQTLVAVVQQDLRVVYFYIYPQEAFEERFPVRACWVRNRVAAPQSTDNMAMEQGVAPRLAAEFCRNI AGEAELDPQFISIIWSESDDGAALWYQGQLLAIIPGWSLYIDHSICYSASCIKDNPLVLPLGSASTNTQYALAQHTRQFW RRWQQEEGNPWPLLQTEYIQCYEQHFGPSVKYYAIDQGKWPPMAISQHEKEGIYYFLTIGVSIRPQPWVEILFNDDASQY RRMEMALAIDGQYVNEDNAIHMASALAGFAHVPWNKITWLGEGHTLESAVAPQGYEGYILSSALYADADHLTLPHQQDDP VNIYWASPIFTRERELAHSVPNGGSDLLKKLQQQGVNHIFSPRQAVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41728; Mature: 41728
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKESEVLAEVSNENQTLVAVVQQDLRVVYFYIYPQEAFEERFPVRACWVRNRVAAPQSTD CCCHHHHHHHCCCCCEEEEEECCCCEEEEEEEECHHHHHHCCCCHHHHHHCCCCCCCCCC NMAMEQGVAPRLAAEFCRNIAGEAELDPQFISIIWSESDDGAALWYQGQLLAIIPGWSLY CHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEECCEEEEEECCCEEE IDHSICYSASCIKDNPLVLPLGSASTNTQYALAQHTRQFWRRWQQEEGNPWPLLQTEYIQ EECHHHEECEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH CYEQHFGPSVKYYAIDQGKWPPMAISQHEKEGIYYFLTIGVSIRPQPWVEILFNDDASQY HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCHHHH RRMEMALAIDGQYVNEDNAIHMASALAGFAHVPWNKITWLGEGHTLESAVAPQGYEGYIL HHEEEEEEECCEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEHHHCCCCCCCCEEE SSALYADADHLTLPHQQDDPVNIYWASPIFTRERELAHSVPNGGSDLLKKLQQQGVNHIF EHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHC SPRQAVI CCHHHCC >Mature Secondary Structure MKESEVLAEVSNENQTLVAVVQQDLRVVYFYIYPQEAFEERFPVRACWVRNRVAAPQSTD CCCHHHHHHHCCCCCEEEEEECCCCEEEEEEEECHHHHHHCCCCHHHHHHCCCCCCCCCC NMAMEQGVAPRLAAEFCRNIAGEAELDPQFISIIWSESDDGAALWYQGQLLAIIPGWSLY CHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEECCEEEEEECCCEEE IDHSICYSASCIKDNPLVLPLGSASTNTQYALAQHTRQFWRRWQQEEGNPWPLLQTEYIQ EECHHHEECEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH CYEQHFGPSVKYYAIDQGKWPPMAISQHEKEGIYYFLTIGVSIRPQPWVEILFNDDASQY HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCHHHH RRMEMALAIDGQYVNEDNAIHMASALAGFAHVPWNKITWLGEGHTLESAVAPQGYEGYIL HHEEEEEEECCEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEHHHCCCCCCCCEEE SSALYADADHLTLPHQQDDPVNIYWASPIFTRERELAHSVPNGGSDLLKKLQQQGVNHIF EHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHC SPRQAVI CCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA