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The map label for this gene is ycbX [H]

Identifier: 170024867

GI number: 170024867

Start: 2900873

End: 2901982

Strand: Direct

Name: ycbX [H]

Synonym: YPK_2642

Alternate gene names: 170024867

Gene position: 2900873-2901982 (Clockwise)

Preceding gene: 170024861

Following gene: 170024872

Centisome position: 61.86

GC content: 48.65

Gene sequence:

>1110_bases
GTGATTACCCTCTCCCGACTTTACGTTCATCCGGTGAAATCTATGCGTGGTTTGCAGCTTTCCCACGCCCAGGTTAGCCG
CAGCGGGCTGGCCTTTGACCGCGTATTTATGATCACCGAACCGGACGGAACATTCATTACTGCACGCCAATATCCGAAGA
TGGTGATGTTTACCCCCGCATTAATGGCGGACGGTTTATATCTCACCGCCCCCGATGGCGAGAGTGCCAGTATCCGCTTT
AATGATTTTTTAGCCAATCCCGCCCCCACTGAAGTTTGGGGAAATCATTTTACTGCGTTAATTGCACCCGAGGCGATCAA
TAGTTGGTTAAGTGGTTATTTTCAGCGTGACGTACAACTACGTTGGGTCGGCACAGAATTAACACGTCGGGTCAAACCAT
TGCCGGAGGTTCCCCTCTCTTTTGCTGATGGCTTCCCTTATCTGCTGATTAACGAAGCGTCCTTTAAAGATTTGCAGCAA
CGTTGCCCCGCCAGTATTAAACTGGAACAGTTTCGTCCGAATTTAGTGATTACGGGTACCACGGCCTTTGCCGAAGATTG
CTGGCAGGTTATTCGGATAGGCGATATCACATTTGATTTAGTCAAACCTTGCAGCCGCTGTGTATTAACGACCGTCAGTG
TTGAGCGTGGGCAAAAACATCCAGCCGGCGAACCATTGCGAACATTACAGACGTTCCGAACTGCGGAGAATGGTGATGTC
GATTTTGGCCAGAATATGGTGGCCAGGAACAGCGGTATTATTCGAGTTGGCGACGAAGTTGAAGTTCTGATCACCAAACC
GCCAAGACCCTACGGTGCCGGAGCCGTTGTTGAAAGCCTTAGTGCGCCGCAGGATCAGTCAAAAACGGTATCCATTGAAT
ATAATGGCATCCGCTTTAACGGCAATAATCAACAAATACTATTGGAACAGTTAGAACAGCAGAATATCCGCATCCCTTAT
TCGTGTCGGGCCGGGATATGTGGCAGTTGCAGAGTTACATTACTCACTGGCGATGTTGCTGCACTCAAAAAAAGCGCCGT
TGGTAACGATGGAACCATTCTTTGTTGCAGTTGCATCCCTAAAGGCGATATTTCCCTTAGTGGCAAATAA

Upstream 100 bases:

>100_bases
CGCACTATCACCAAAAAGAAAATTGTTGCGCATTATAGCTAATCCCAGCAGCTTGTCATAAAGTTGCTCCCTCTAATTTA
ATACTCACACGGAGGTAATG

Downstream 100 bases:

>100_bases
CCGCATTCAAAAACACACCGACACATTATACCGCACGGTCATACGCTGTTGTGGTGTTAACCTCTTCAACCATAAGTGGT
AATAAACGGTTATTCATTAT

Product: MOSC domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MITLSRLYVHPVKSMRGLQLSHAQVSRSGLAFDRVFMITEPDGTFITARQYPKMVMFTPALMADGLYLTAPDGESASIRF
NDFLANPAPTEVWGNHFTALIAPEAINSWLSGYFQRDVQLRWVGTELTRRVKPLPEVPLSFADGFPYLLINEASFKDLQQ
RCPASIKLEQFRPNLVITGTTAFAEDCWQVIRIGDITFDLVKPCSRCVLTTVSVERGQKHPAGEPLRTLQTFRTAENGDV
DFGQNMVARNSGIIRVGDEVEVLITKPPRPYGAGAVVESLSAPQDQSKTVSIEYNGIRFNGNNQQILLEQLEQQNIRIPY
SCRAGICGSCRVTLLTGDVAALKKSAVGNDGTILCCSCIPKGDISLSGK

Sequences:

>Translated_369_residues
MITLSRLYVHPVKSMRGLQLSHAQVSRSGLAFDRVFMITEPDGTFITARQYPKMVMFTPALMADGLYLTAPDGESASIRF
NDFLANPAPTEVWGNHFTALIAPEAINSWLSGYFQRDVQLRWVGTELTRRVKPLPEVPLSFADGFPYLLINEASFKDLQQ
RCPASIKLEQFRPNLVITGTTAFAEDCWQVIRIGDITFDLVKPCSRCVLTTVSVERGQKHPAGEPLRTLQTFRTAENGDV
DFGQNMVARNSGIIRVGDEVEVLITKPPRPYGAGAVVESLSAPQDQSKTVSIEYNGIRFNGNNQQILLEQLEQQNIRIPY
SCRAGICGSCRVTLLTGDVAALKKSAVGNDGTILCCSCIPKGDISLSGK
>Mature_369_residues
MITLSRLYVHPVKSMRGLQLSHAQVSRSGLAFDRVFMITEPDGTFITARQYPKMVMFTPALMADGLYLTAPDGESASIRF
NDFLANPAPTEVWGNHFTALIAPEAINSWLSGYFQRDVQLRWVGTELTRRVKPLPEVPLSFADGFPYLLINEASFKDLQQ
RCPASIKLEQFRPNLVITGTTAFAEDCWQVIRIGDITFDLVKPCSRCVLTTVSVERGQKHPAGEPLRTLQTFRTAENGDV
DFGQNMVARNSGIIRVGDEVEVLITKPPRPYGAGAVVESLSAPQDQSKTVSIEYNGIRFNGNNQQILLEQLEQQNIRIPY
SCRAGICGSCRVTLLTGDVAALKKSAVGNDGTILCCSCIPKGDISLSGK

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI224600454, Length=287, Percent_Identity=32.404181184669, Blast_Score=134, Evalue=9e-32,
Organism=Homo sapiens, GI31542713, Length=281, Percent_Identity=28.8256227758007, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI157388923, Length=277, Percent_Identity=25.2707581227437, Blast_Score=90, Evalue=3e-18,
Organism=Escherichia coli, GI1787179, Length=368, Percent_Identity=69.2934782608696, Blast_Score=550, Evalue=1e-158,
Organism=Caenorhabditis elegans, GI17540702, Length=285, Percent_Identity=28.0701754385965, Blast_Score=111, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17561286, Length=283, Percent_Identity=28.6219081272085, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI71990971, Length=291, Percent_Identity=29.2096219931272, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI25147498, Length=238, Percent_Identity=24.3697478991597, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI45550400, Length=286, Percent_Identity=28.3216783216783, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI17647607, Length=251, Percent_Identity=25.0996015936255, Blast_Score=82, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 40619; Mature: 40619

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLSRLYVHPVKSMRGLQLSHAQVSRSGLAFDRVFMITEPDGTFITARQYPKMVMFTPA
CEEEEHHHHHHHHHHCCCEEHHHHHHCCCCEEEEEEEEECCCCCEEECCCCCCEEEEEHH
LMADGLYLTAPDGESASIRFNDFLANPAPTEVWGNHFTALIAPEAINSWLSGYFQRDVQL
HHHCCEEEECCCCCCCEEEEHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCEEE
RWVGTELTRRVKPLPEVPLSFADGFPYLLINEASFKDLQQRCPASIKLEQFRPNLVITGT
EEECHHHHHHCCCCCCCCCHHCCCCCEEEEECCCHHHHHHHCCCCEEEECCCCCEEEEEC
TAFAEDCWQVIRIGDITFDLVKPCSRCVLTTVSVERGQKHPAGEPLRTLQTFRTAENGDV
HHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEHHCCCCCCCCCHHHHHHHHHCCCCCCC
DFGQNMVARNSGIIRVGDEVEVLITKPPRPYGAGAVVESLSAPQDQSKTVSIEYNGIRFN
CCCCCHHHCCCCEEEECCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEEEECCEEEC
GNNQQILLEQLEQQNIRIPYSCRAGICGSCRVTLLTGDVAALKKSAVGNDGTILCCSCIP
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCEEEEECCC
KGDISLSGK
CCCEEECCC
>Mature Secondary Structure
MITLSRLYVHPVKSMRGLQLSHAQVSRSGLAFDRVFMITEPDGTFITARQYPKMVMFTPA
CEEEEHHHHHHHHHHCCCEEHHHHHHCCCCEEEEEEEEECCCCCEEECCCCCCEEEEEHH
LMADGLYLTAPDGESASIRFNDFLANPAPTEVWGNHFTALIAPEAINSWLSGYFQRDVQL
HHHCCEEEECCCCCCCEEEEHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCEEE
RWVGTELTRRVKPLPEVPLSFADGFPYLLINEASFKDLQQRCPASIKLEQFRPNLVITGT
EEECHHHHHHCCCCCCCCCHHCCCCCEEEEECCCHHHHHHHCCCCEEEECCCCCEEEEEC
TAFAEDCWQVIRIGDITFDLVKPCSRCVLTTVSVERGQKHPAGEPLRTLQTFRTAENGDV
HHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEHHCCCCCCCCCHHHHHHHHHCCCCCCC
DFGQNMVARNSGIIRVGDEVEVLITKPPRPYGAGAVVESLSAPQDQSKTVSIEYNGIRFN
CCCCCHHHCCCCEEEECCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEEEECCEEEC
GNNQQILLEQLEQQNIRIPYSCRAGICGSCRVTLLTGDVAALKKSAVGNDGTILCCSCIP
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCEEEEECCC
KGDISLSGK
CCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]