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The map label for this gene is 170024550

Identifier: 170024550

GI number: 170024550

Start: 2564513

End: 2565544

Strand: Reverse

Name: 170024550

Synonym: YPK_2325

Alternate gene names: NA

Gene position: 2565544-2564513 (Counterclockwise)

Preceding gene: 170024551

Following gene: 170024535

Centisome position: 54.71

GC content: 49.52

Gene sequence:

>1032_bases
ATGAGCCGCAAACAGCGAAATAAACGCAATACTGCGGCAATAGTAAAAAGCGCCGTACCACAAGCCGAGGCGTTTACTTT
TGACGACCCGATCCCAATGATGGATCGACGCGATATTCTGGATTATCTGGAATGCGCAGTAATGGATCGCTGGTATGAGC
CGCCGGTGTCATTCAACGGTCTGGCTAAATCCTTTCGTGCGGCGGTGCATCACAGCTCGCCAATCTATATGAAACGTAAT
GTACTGGTTAGTCTGTTTGAGCCTCACCGATTACTCTCGAAACAGGATTTTAGCCGTTATGCGTTGGATTTCTTAGTGTT
CGCCAATTCATTTTTAGAAGCCCGCTATAATCGGTTGGGGGGATTGATGAAGCTAGTGCCTAGCCCGGCCAAATATACCC
GCCGCGGCGTGGAGGCGGACACCTATTGGTATGTCTCATCCTATGCCAACCCACACCCGTTTGAAGCCAATAGCGTTTTT
CACCTGCTAGACCCGGATATTAATCAGGAGATCTACGGCGTTCCTGAATATCTCGCCTCGCTAAACTCGACCTGGCTTAA
TGAAGCAGCCACTTTGTTCCGCCGTAAATATTATCTGAATGGCAGTCACGCTGGATTTATTCTGTATATGAACGACGCCG
CCCATAAACAGGAGGATATCGACGCCTTACGTAAGGCGCTGAAAGAATCCAAAGGGCCGGGCAATTTCCGCAATCTGTTT
ATGTATGCCCCGGCCGGTAAAAAGGACGGCATACAGGTGATCCCACTTGCAGAGGTTGCCGCCAAGGATGAATTTGCCAG
CATTAAGAACGTCACCCGCGACGACCAGCTCGCTATGCAACGGGTGCCACCTCAACTGATGGGGATTTTACCCAATAACA
CCGGCGGTTTTGGTGATGTAGAAAAAGCCGCGCGGGTGTTTGCCATTAACGAACTGGCCCCCTTGCAAGAACGGCTGATG
GAAATAAATGATTGGGTTGGGGAGGAAGTTGTCAGATTTAAGCCGTATGAATTACTTGCCAAACAAGAGTAA

Upstream 100 bases:

>100_bases
ATGATGTCACCAATCTCAAGGGGGAAATGAGCGCATCTGAATTTGCCATGCTTTACATGTGCCAATGGCCCACTCAGACG
GTAAATCAAGGGGCGTCATT

Downstream 100 bases:

>100_bases
ATCCAACTTATGCATATGCTAACCGTCTTTTAGGCGGTTTTTGCATTTATATGCACATGAAAATTAACTGGCCGCCACTT
TATTTCTTATATTGAGAATT

Product: PBSX family phage portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MSRKQRNKRNTAAIVKSAVPQAEAFTFDDPIPMMDRRDILDYLECAVMDRWYEPPVSFNGLAKSFRAAVHHSSPIYMKRN
VLVSLFEPHRLLSKQDFSRYALDFLVFANSFLEARYNRLGGLMKLVPSPAKYTRRGVEADTYWYVSSYANPHPFEANSVF
HLLDPDINQEIYGVPEYLASLNSTWLNEAATLFRRKYYLNGSHAGFILYMNDAAHKQEDIDALRKALKESKGPGNFRNLF
MYAPAGKKDGIQVIPLAEVAAKDEFASIKNVTRDDQLAMQRVPPQLMGILPNNTGGFGDVEKAARVFAINELAPLQERLM
EINDWVGEEVVRFKPYELLAKQE

Sequences:

>Translated_343_residues
MSRKQRNKRNTAAIVKSAVPQAEAFTFDDPIPMMDRRDILDYLECAVMDRWYEPPVSFNGLAKSFRAAVHHSSPIYMKRN
VLVSLFEPHRLLSKQDFSRYALDFLVFANSFLEARYNRLGGLMKLVPSPAKYTRRGVEADTYWYVSSYANPHPFEANSVF
HLLDPDINQEIYGVPEYLASLNSTWLNEAATLFRRKYYLNGSHAGFILYMNDAAHKQEDIDALRKALKESKGPGNFRNLF
MYAPAGKKDGIQVIPLAEVAAKDEFASIKNVTRDDQLAMQRVPPQLMGILPNNTGGFGDVEKAARVFAINELAPLQERLM
EINDWVGEEVVRFKPYELLAKQE
>Mature_342_residues
SRKQRNKRNTAAIVKSAVPQAEAFTFDDPIPMMDRRDILDYLECAVMDRWYEPPVSFNGLAKSFRAAVHHSSPIYMKRNV
LVSLFEPHRLLSKQDFSRYALDFLVFANSFLEARYNRLGGLMKLVPSPAKYTRRGVEADTYWYVSSYANPHPFEANSVFH
LLDPDINQEIYGVPEYLASLNSTWLNEAATLFRRKYYLNGSHAGFILYMNDAAHKQEDIDALRKALKESKGPGNFRNLFM
YAPAGKKDGIQVIPLAEVAAKDEFASIKNVTRDDQLAMQRVPPQLMGILPNNTGGFGDVEKAARVFAINELAPLQERLME
INDWVGEEVVRFKPYELLAKQE

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 39140; Mature: 39009

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKQRNKRNTAAIVKSAVPQAEAFTFDDPIPMMDRRDILDYLECAVMDRWYEPPVSFNG
CCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH
LAKSFRAAVHHSSPIYMKRNVLVSLFEPHRLLSKQDFSRYALDFLVFANSFLEARYNRLG
HHHHHHHHHHCCCCEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLMKLVPSPAKYTRRGVEADTYWYVSSYANPHPFEANSVFHLLDPDINQEIYGVPEYLAS
HHHHHCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCHHCCCHHHHHH
LNSTWLNEAATLFRRKYYLNGSHAGFILYMNDAAHKQEDIDALRKALKESKGPGNFRNLF
HHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEE
MYAPAGKKDGIQVIPLAEVAAKDEFASIKNVTRDDQLAMQRVPPQLMGILPNNTGGFGDV
EECCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHEEECCCCCCCCCCH
EKAARVFAINELAPLQERLMEINDWVGEEVVRFKPYELLAKQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure 
SRKQRNKRNTAAIVKSAVPQAEAFTFDDPIPMMDRRDILDYLECAVMDRWYEPPVSFNG
CCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH
LAKSFRAAVHHSSPIYMKRNVLVSLFEPHRLLSKQDFSRYALDFLVFANSFLEARYNRLG
HHHHHHHHHHCCCCEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLMKLVPSPAKYTRRGVEADTYWYVSSYANPHPFEANSVFHLLDPDINQEIYGVPEYLAS
HHHHHCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCHHCCCHHHHHH
LNSTWLNEAATLFRRKYYLNGSHAGFILYMNDAAHKQEDIDALRKALKESKGPGNFRNLF
HHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEE
MYAPAGKKDGIQVIPLAEVAAKDEFASIKNVTRDDQLAMQRVPPQLMGILPNNTGGFGDV
EECCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHEEECCCCCCCCCCH
EKAARVFAINELAPLQERLMEINDWVGEEVVRFKPYELLAKQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]