| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024551
Identifier: 170024551
GI number: 170024551
Start: 2565541
End: 2566266
Strand: Reverse
Name: 170024551
Synonym: YPK_2326
Alternate gene names: NA
Gene position: 2566266-2565541 (Counterclockwise)
Preceding gene: 170024552
Following gene: 170024550
Centisome position: 54.72
GC content: 44.35
Gene sequence:
>726_bases ATGAAACACGCCATTTCGGATAAAACCAGTACCGAACACCTTAAATACTGGATGCACAGATGGGCCTTTAATCATCAGCG TGAGTGGTATAAAACTGGTATTGATTATTGCACCCGGAATATAACCAAAACCCGACAGGCCGGTGCAGATATATTCTTTG CTCTTGAGGGGTTAATTGATGCTCTTGAAACCGGACGAGATCAAATCTATTTCAATGTAGGAGATGATACGAATAGTGCG GCGCAGCAATACACCCTTAACTGGATGAAAATTGGTCATGTTGCTGATTTTGATATTGTCGGAGGCGAAGTCAGTAAATT GAACGCCATTCGTTTGGATAATGGCGCGCAAATCAGCTTCGTGAATGAAAGCTCACACGCTGCGGAATATTCCGGCAATG TCTATGTCAGTGAATATGCCTGGGCAGAAAATCCCGGCAGATTATTAAAAATAGCCAAAGCGATATCGATGCATAAGCGT CATCGCAGTACGTTTTACACTACCCCCTCACGCAATGTGGATGCTTTTACTTTTTGGTTACAGGCGCAGGAGAGCAATTA TCAATGGTGCCAAAACGTCACCATTGAGGATATCGCCGGTAATGGATGCTTATATAGCCCAGATGATGTCACCAATCTCA AGGGGGAAATGAGCGCATCTGAATTTGCCATGCTTTACATGTGCCAATGGCCCACTCAGACGGTAAATCAAGGGGCGTCA TTATGA
Upstream 100 bases:
>100_bases TCAGTCACGGCGACGTGGCATGGGCCATTATGCACGCATTATTCCATGAGCCTCTTGAGGGCATTAACAGCAATAACACC AGTGTGATGGAGATATATTG
Downstream 100 bases:
>100_bases GCCGCAAACAGCGAAATAAACGCAATACTGCGGCAATAGTAAAAAGCGCCGTACCACAAGCCGAGGCGTTTACTTTTGAC GACCCGATCCCAATGATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Phage-Related Terminase ATPase Subunit; Orf16-Like Phage Protein; Mu-Like Prophage FluMu Protein Gp; ATPase Subunit Of Terminase; Phage Gene; Terminase Subunit; Phage P2 Terminase ATPase Subunit GpP-Like Protein; Bacteriophage Terminase Large Subunit; Prophage Large Terminase Protein; Fels-2 Prophage Protein; Phage Terminase Subunit GpP; DNA-Dependent ATPase Terminase Subunit; Terminase ATPase Subunit Bacteriophage Origin; Terminase Related Protein; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage-Related Terminase
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MKHAISDKTSTEHLKYWMHRWAFNHQREWYKTGIDYCTRNITKTRQAGADIFFALEGLIDALETGRDQIYFNVGDDTNSA AQQYTLNWMKIGHVADFDIVGGEVSKLNAIRLDNGAQISFVNESSHAAEYSGNVYVSEYAWAENPGRLLKIAKAISMHKR HRSTFYTTPSRNVDAFTFWLQAQESNYQWCQNVTIEDIAGNGCLYSPDDVTNLKGEMSASEFAMLYMCQWPTQTVNQGAS L
Sequences:
>Translated_241_residues MKHAISDKTSTEHLKYWMHRWAFNHQREWYKTGIDYCTRNITKTRQAGADIFFALEGLIDALETGRDQIYFNVGDDTNSA AQQYTLNWMKIGHVADFDIVGGEVSKLNAIRLDNGAQISFVNESSHAAEYSGNVYVSEYAWAENPGRLLKIAKAISMHKR HRSTFYTTPSRNVDAFTFWLQAQESNYQWCQNVTIEDIAGNGCLYSPDDVTNLKGEMSASEFAMLYMCQWPTQTVNQGAS L >Mature_241_residues MKHAISDKTSTEHLKYWMHRWAFNHQREWYKTGIDYCTRNITKTRQAGADIFFALEGLIDALETGRDQIYFNVGDDTNSA AQQYTLNWMKIGHVADFDIVGGEVSKLNAIRLDNGAQISFVNESSHAAEYSGNVYVSEYAWAENPGRLLKIAKAISMHKR HRSTFYTTPSRNVDAFTFWLQAQESNYQWCQNVTIEDIAGNGCLYSPDDVTNLKGEMSASEFAMLYMCQWPTQTVNQGAS L
Specific function: Unknown
COG id: COG5484
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27456; Mature: 27456
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHAISDKTSTEHLKYWMHRWAFNHQREWYKTGIDYCTRNITKTRQAGADIFFALEGLID CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ALETGRDQIYFNVGDDTNSAAQQYTLNWMKIGHVADFDIVGGEVSKLNAIRLDNGAQISF HHHCCCCEEEEEECCCCCCHHHHHEEEEEEECCEECCEEECCCHHHEEEEEECCCCEEEE VNESSHAAEYSGNVYVSEYAWAENPGRLLKIAKAISMHKRHRSTFYTTPSRNVDAFTFWL ECCCCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEE QAQESNYQWCQNVTIEDIAGNGCLYSPDDVTNLKGEMSASEFAMLYMCQWPTQTVNQGAS EECCCCCHHHHCCEEEEECCCCCEECCCCCCCCCCCCCHHHEEEEEEEECCCHHHCCCCC L C >Mature Secondary Structure MKHAISDKTSTEHLKYWMHRWAFNHQREWYKTGIDYCTRNITKTRQAGADIFFALEGLID CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ALETGRDQIYFNVGDDTNSAAQQYTLNWMKIGHVADFDIVGGEVSKLNAIRLDNGAQISF HHHCCCCEEEEEECCCCCCHHHHHEEEEEEECCEECCEEECCCHHHEEEEEECCCCEEEE VNESSHAAEYSGNVYVSEYAWAENPGRLLKIAKAISMHKRHRSTFYTTPSRNVDAFTFWL ECCCCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEE QAQESNYQWCQNVTIEDIAGNGCLYSPDDVTNLKGEMSASEFAMLYMCQWPTQTVNQGAS EECCCCCHHHHCCEEEEECCCCCEECCCCCCCCCCCCCHHHEEEEEEEECCCHHHCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA