Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is 170024551

Identifier: 170024551

GI number: 170024551

Start: 2565541

End: 2566266

Strand: Reverse

Name: 170024551

Synonym: YPK_2326

Alternate gene names: NA

Gene position: 2566266-2565541 (Counterclockwise)

Preceding gene: 170024552

Following gene: 170024550

Centisome position: 54.72

GC content: 44.35

Gene sequence:

>726_bases
ATGAAACACGCCATTTCGGATAAAACCAGTACCGAACACCTTAAATACTGGATGCACAGATGGGCCTTTAATCATCAGCG
TGAGTGGTATAAAACTGGTATTGATTATTGCACCCGGAATATAACCAAAACCCGACAGGCCGGTGCAGATATATTCTTTG
CTCTTGAGGGGTTAATTGATGCTCTTGAAACCGGACGAGATCAAATCTATTTCAATGTAGGAGATGATACGAATAGTGCG
GCGCAGCAATACACCCTTAACTGGATGAAAATTGGTCATGTTGCTGATTTTGATATTGTCGGAGGCGAAGTCAGTAAATT
GAACGCCATTCGTTTGGATAATGGCGCGCAAATCAGCTTCGTGAATGAAAGCTCACACGCTGCGGAATATTCCGGCAATG
TCTATGTCAGTGAATATGCCTGGGCAGAAAATCCCGGCAGATTATTAAAAATAGCCAAAGCGATATCGATGCATAAGCGT
CATCGCAGTACGTTTTACACTACCCCCTCACGCAATGTGGATGCTTTTACTTTTTGGTTACAGGCGCAGGAGAGCAATTA
TCAATGGTGCCAAAACGTCACCATTGAGGATATCGCCGGTAATGGATGCTTATATAGCCCAGATGATGTCACCAATCTCA
AGGGGGAAATGAGCGCATCTGAATTTGCCATGCTTTACATGTGCCAATGGCCCACTCAGACGGTAAATCAAGGGGCGTCA
TTATGA

Upstream 100 bases:

>100_bases
TCAGTCACGGCGACGTGGCATGGGCCATTATGCACGCATTATTCCATGAGCCTCTTGAGGGCATTAACAGCAATAACACC
AGTGTGATGGAGATATATTG

Downstream 100 bases:

>100_bases
GCCGCAAACAGCGAAATAAACGCAATACTGCGGCAATAGTAAAAAGCGCCGTACCACAAGCCGAGGCGTTTACTTTTGAC
GACCCGATCCCAATGATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Phage-Related Terminase ATPase Subunit; Orf16-Like Phage Protein; Mu-Like Prophage FluMu Protein Gp; ATPase Subunit Of Terminase; Phage Gene; Terminase Subunit; Phage P2 Terminase ATPase Subunit GpP-Like Protein; Bacteriophage Terminase Large Subunit; Prophage Large Terminase Protein; Fels-2 Prophage Protein; Phage Terminase Subunit GpP; DNA-Dependent ATPase Terminase Subunit; Terminase ATPase Subunit Bacteriophage Origin; Terminase Related Protein; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage-Related Terminase

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKHAISDKTSTEHLKYWMHRWAFNHQREWYKTGIDYCTRNITKTRQAGADIFFALEGLIDALETGRDQIYFNVGDDTNSA
AQQYTLNWMKIGHVADFDIVGGEVSKLNAIRLDNGAQISFVNESSHAAEYSGNVYVSEYAWAENPGRLLKIAKAISMHKR
HRSTFYTTPSRNVDAFTFWLQAQESNYQWCQNVTIEDIAGNGCLYSPDDVTNLKGEMSASEFAMLYMCQWPTQTVNQGAS
L

Sequences:

>Translated_241_residues
MKHAISDKTSTEHLKYWMHRWAFNHQREWYKTGIDYCTRNITKTRQAGADIFFALEGLIDALETGRDQIYFNVGDDTNSA
AQQYTLNWMKIGHVADFDIVGGEVSKLNAIRLDNGAQISFVNESSHAAEYSGNVYVSEYAWAENPGRLLKIAKAISMHKR
HRSTFYTTPSRNVDAFTFWLQAQESNYQWCQNVTIEDIAGNGCLYSPDDVTNLKGEMSASEFAMLYMCQWPTQTVNQGAS
L
>Mature_241_residues
MKHAISDKTSTEHLKYWMHRWAFNHQREWYKTGIDYCTRNITKTRQAGADIFFALEGLIDALETGRDQIYFNVGDDTNSA
AQQYTLNWMKIGHVADFDIVGGEVSKLNAIRLDNGAQISFVNESSHAAEYSGNVYVSEYAWAENPGRLLKIAKAISMHKR
HRSTFYTTPSRNVDAFTFWLQAQESNYQWCQNVTIEDIAGNGCLYSPDDVTNLKGEMSASEFAMLYMCQWPTQTVNQGAS
L

Specific function: Unknown

COG id: COG5484

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27456; Mature: 27456

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHAISDKTSTEHLKYWMHRWAFNHQREWYKTGIDYCTRNITKTRQAGADIFFALEGLID
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ALETGRDQIYFNVGDDTNSAAQQYTLNWMKIGHVADFDIVGGEVSKLNAIRLDNGAQISF
HHHCCCCEEEEEECCCCCCHHHHHEEEEEEECCEECCEEECCCHHHEEEEEECCCCEEEE
VNESSHAAEYSGNVYVSEYAWAENPGRLLKIAKAISMHKRHRSTFYTTPSRNVDAFTFWL
ECCCCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEE
QAQESNYQWCQNVTIEDIAGNGCLYSPDDVTNLKGEMSASEFAMLYMCQWPTQTVNQGAS
EECCCCCHHHHCCEEEEECCCCCEECCCCCCCCCCCCCHHHEEEEEEEECCCHHHCCCCC
L
C
>Mature Secondary Structure
MKHAISDKTSTEHLKYWMHRWAFNHQREWYKTGIDYCTRNITKTRQAGADIFFALEGLID
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ALETGRDQIYFNVGDDTNSAAQQYTLNWMKIGHVADFDIVGGEVSKLNAIRLDNGAQISF
HHHCCCCEEEEEECCCCCCHHHHHEEEEEEECCEECCEEECCCHHHEEEEEECCCCEEEE
VNESSHAAEYSGNVYVSEYAWAENPGRLLKIAKAISMHKRHRSTFYTTPSRNVDAFTFWL
ECCCCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEE
QAQESNYQWCQNVTIEDIAGNGCLYSPDDVTNLKGEMSASEFAMLYMCQWPTQTVNQGAS
EECCCCCHHHHCCEEEEECCCCCEECCCCCCCCCCCCCHHHEEEEEEEECCCHHHCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA