| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024491
Identifier: 170024491
GI number: 170024491
Start: 2514473
End: 2514946
Strand: Direct
Name: 170024491
Synonym: YPK_2264
Alternate gene names: NA
Gene position: 2514473-2514946 (Clockwise)
Preceding gene: 170024490
Following gene: 170024493
Centisome position: 53.62
GC content: 41.14
Gene sequence:
>474_bases ATGTTTAACCAAAACATTCAATGCAAGAAAATTTTATCACTGTTTTTAGTTTTGTCTGGCACTGCCTTTTTAAGCGGGTG TGTATACCATAATTATGGTAGCCCCCATATTAACGGCGTTATCACAGATCAAGGGCAAACATTGGCTGGCGTGAAAGTTT CTTTAGCGAATTTTGATCAAAAAATACAGACAACCACCACCGATACCAAGGGACATTTCTCGTTTATTCCGCAAGGCGAG TGGAATGTTTTTATTCCCATTGGTCCACAAGATCGCATGAATAACTGGTCAATCATTATTGAACAAGGCCCGTTGGAGAT CACCGGATATAAGCGTTCTCACCTGGGTGGTGCTTTCTCTGGGTATTCATATCGTGATCATATTACGCTGGTTTGCGATG TGTCTCTGTCAAGAAAAGATATTGGCGACTCGGATAATAATCCTGTATGCAGGCCGGATATTGATAGCCAATAA
Upstream 100 bases:
>100_bases TGAACGTGACGCATTAGATCAACAGCAAGCGACAGAATATATCCAGTCTTTACTACACCCTAATAGTGATAAATAATTTA AAAAATAGGATTATTAATTA
Downstream 100 bases:
>100_bases TTTTGCTCTTGGGGCGTTTTTTAACCGATTGGATCGTTTTAACCTATTGAGTCGCCTTAACCTACGGAGAGAATTCAAGG AAACACGGTCAGGACAAAGT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MFNQNIQCKKILSLFLVLSGTAFLSGCVYHNYGSPHINGVITDQGQTLAGVKVSLANFDQKIQTTTTDTKGHFSFIPQGE WNVFIPIGPQDRMNNWSIIIEQGPLEITGYKRSHLGGAFSGYSYRDHITLVCDVSLSRKDIGDSDNNPVCRPDIDSQ
Sequences:
>Translated_157_residues MFNQNIQCKKILSLFLVLSGTAFLSGCVYHNYGSPHINGVITDQGQTLAGVKVSLANFDQKIQTTTTDTKGHFSFIPQGE WNVFIPIGPQDRMNNWSIIIEQGPLEITGYKRSHLGGAFSGYSYRDHITLVCDVSLSRKDIGDSDNNPVCRPDIDSQ >Mature_157_residues MFNQNIQCKKILSLFLVLSGTAFLSGCVYHNYGSPHINGVITDQGQTLAGVKVSLANFDQKIQTTTTDTKGHFSFIPQGE WNVFIPIGPQDRMNNWSIIIEQGPLEITGYKRSHLGGAFSGYSYRDHITLVCDVSLSRKDIGDSDNNPVCRPDIDSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17383; Mature: 17383
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNQNIQCKKILSLFLVLSGTAFLSGCVYHNYGSPHINGVITDQGQTLAGVKVSLANFDQ CCCCCCCHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCEEEECCCCEEEEEEEEECCCCC KIQTTTTDTKGHFSFIPQGEWNVFIPIGPQDRMNNWSIIIEQGPLEITGYKRSHLGGAFS EEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCCCCC GYSYRDHITLVCDVSLSRKDIGDSDNNPVCRPDIDSQ CCCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure MFNQNIQCKKILSLFLVLSGTAFLSGCVYHNYGSPHINGVITDQGQTLAGVKVSLANFDQ CCCCCCCHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCEEEECCCCEEEEEEEEECCCCC KIQTTTTDTKGHFSFIPQGEWNVFIPIGPQDRMNNWSIIIEQGPLEITGYKRSHLGGAFS EEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCCCCC GYSYRDHITLVCDVSLSRKDIGDSDNNPVCRPDIDSQ CCCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA