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The map label for this gene is ybeQ [H]

Identifier: 170024436

GI number: 170024436

Start: 2443628

End: 2445790

Strand: Direct

Name: ybeQ [H]

Synonym: YPK_2207

Alternate gene names: 170024436

Gene position: 2443628-2445790 (Clockwise)

Preceding gene: 170024432

Following gene: 170024437

Centisome position: 52.11

GC content: 37.91

Gene sequence:

>2163_bases
TTGAAAAAAAAACTGGTGGCACTCTTAATACTCTCTTATCCGTCTGTTGCATATCTAAAGCAACCCCCTCCGGCAGTACC
TAAACCCATTACCTTTGTTGCTAAAATTGATAACATTGATTTTAACAAAACGGCCATTGATAGTGATATGAAATTACTGC
TGGCCGATCGGTTCCACTTTAAAACCAAAACCCCCTGTAACAAGAATACGCTTTCAGGCCGGCCAGAATCATTTGGTTTA
ACGTCAGAAGTATACGCGGAAAAAATCAAGAGTTTGCTCGTTGAGATCTTAAGTGAACGTTACCTTTTCCTGACAATAGA
TCAATGTGACCGCGGTGGCACACCGATGCTCACCAATATAGAAGTTTGCACTGAAGCACTGTGCGGTGCTGAATTCATGA
AAAAAGAATCTTATCTTTGGTTAAATCAAGACTTAAAGGCCACGGTGAAACGCCAGGCGACATCGGTGATCCCTATGCCA
TTAACCTTTGATAAAGAAAAGCAGCTGTGGAAAGTGGCCGGGTGGTTTATTGAGTCATCAGAAGAAACTGAAGAACTTAT
ACCGAGCAAACTGCTGGCCTTTGAAGGTTATACTGACGATGAAACATTCAAAACACAAAAATTCGTCTCTACCTTCAAAT
CCTATTACTCCAGTGGAAATATTCAACATATTCTCACTTATAATAAAGAGGGAAAAGAGGATGGGAAATACGACTCATAT
TATGATGAAAAAGGAAAATTAGCTGAGACGTTGGTATTTAAAAATGGCTTGATCAATGGTGAGTATATTATCTACCATGA
AAATGGTGCTATTGAAAGCAAACGACATTTTATTGACAGCAAAATAGCCGATGGAGAGTGCCCTCATTATTACGACAATG
GAAACATTAAAGAGAACCATAGCTATTTGAATAATAAACTCGAAGGGAAATACTTTGAGTATTTTCCTGATGGTAAAATT
AAAGATGAAAGAACCTACCATGCTGGCAAAGTCGTTGGTAAATACACAGTCTACTTTGAATCAGGTAAAATTAGAGCTAT
TTATAATAAAAACAATAAAGATCAGTACCATGGAACTAACGAGGAATACAGCCCCGAAGGGCAGTTAGTGTCTAAATCAA
CGTATAAAGAAGGAAAAAAACTCTCTAGCCAGACTTGGTATAAAAATGGAAAAATGCGACAGGAAGAAATCTACGATAAC
GAAGGTCGCAAAAATGGCGTATCAAGAGAGTGGTTTGATAATGGACAACTTAATACATCAACCAGCTATAAAAATGACAT
CTTAGATGGTGATAGCCAGAAATGGAACGAACAGGGTGAAATAGTATCACTCTCACCGTATAAAGACGGCAAACTTCAGG
GTGAACATAAATATTATGATTCAGGAAAACTACTTTATACCACAATGTATAAGAACGATAAAAAAGATGGTCCGGATAGA
CGATGGAGTATCAATACAGGGAAGTTAATTGAAGAAATGCCCTATGTTGAAGGCATAAGAAGCGGCATCAAAAAAGAGTT
TAATGATCGTACCGGTAGACTGTTAACAACCACCCCTTATGTGAATAATGAAATACAGGGCACCGGAGAAACATATAATG
CCGATGGTGTTAGCATTATTCACTGCTATATCAATAATAAAAGTATTGACTCGCTATACAATCCTATTGAAATACGCAAA
AAAGCCTCACAGAGTGATGATAATGCACAGTATGAACTGGGTAAGTATCATTATACTTGTCAAGACTATGATAGAGGTCT
TAAGTGGCTAGAAAAATCAGCAGACCATAAAAATATTAAGGCGTTATTTCTTTTAGCTCAAATGTATAATGAAGGTGACG
GCGTTAAAGAAGATCAAACCAAATATTTCTCCTATTTACTCAAAGCAGCGCAGTTAGGGCTAAGTGATGCTCAAGTGGAA
ATTGGCTATCTGTATCTCGTCGGTGAAGGGGTAGAAAAGAACTTACCAGAAGCCTATCAGTGGCACATAAAAGCTGCCGA
ACAAGGAAACGTGCACGCCCATTATAACCTTGGTTGGATATATCAAAATGGAGACGGCACCGAGAAAAATTTGGATAAGG
CAAAATTCCACTTTACCGTTGCAGCTAAAAGTGGGATGAGAGAAGCCTATGAAGAATTAAAAAAATTAGAATCCAACAAG
TAA

Upstream 100 bases:

>100_bases
ATATATTAGCACTATTGGTTAGAAAAATGGCATTTCACCCTGAAATTGACTATAAAAAATATTATGGCAATGGATTGAAC
GTTTAAATTAAGGATTAACA

Downstream 100 bases:

>100_bases
ATAATTTTAATAATGGGGTCTGGATTAATCAGACCTCATAAAATTGATCATGGATAAGATTATATGAAACTGAAAATAAA
CTTTTTTTCAACTTTAGTCT

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 720; Mature: 720

Protein sequence:

>720_residues
MKKKLVALLILSYPSVAYLKQPPPAVPKPITFVAKIDNIDFNKTAIDSDMKLLLADRFHFKTKTPCNKNTLSGRPESFGL
TSEVYAEKIKSLLVEILSERYLFLTIDQCDRGGTPMLTNIEVCTEALCGAEFMKKESYLWLNQDLKATVKRQATSVIPMP
LTFDKEKQLWKVAGWFIESSEETEELIPSKLLAFEGYTDDETFKTQKFVSTFKSYYSSGNIQHILTYNKEGKEDGKYDSY
YDEKGKLAETLVFKNGLINGEYIIYHENGAIESKRHFIDSKIADGECPHYYDNGNIKENHSYLNNKLEGKYFEYFPDGKI
KDERTYHAGKVVGKYTVYFESGKIRAIYNKNNKDQYHGTNEEYSPEGQLVSKSTYKEGKKLSSQTWYKNGKMRQEEIYDN
EGRKNGVSREWFDNGQLNTSTSYKNDILDGDSQKWNEQGEIVSLSPYKDGKLQGEHKYYDSGKLLYTTMYKNDKKDGPDR
RWSINTGKLIEEMPYVEGIRSGIKKEFNDRTGRLLTTTPYVNNEIQGTGETYNADGVSIIHCYINNKSIDSLYNPIEIRK
KASQSDDNAQYELGKYHYTCQDYDRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKEDQTKYFSYLLKAAQLGLSDAQVE
IGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLGWIYQNGDGTEKNLDKAKFHFTVAAKSGMREAYEELKKLESNK

Sequences:

>Translated_720_residues
MKKKLVALLILSYPSVAYLKQPPPAVPKPITFVAKIDNIDFNKTAIDSDMKLLLADRFHFKTKTPCNKNTLSGRPESFGL
TSEVYAEKIKSLLVEILSERYLFLTIDQCDRGGTPMLTNIEVCTEALCGAEFMKKESYLWLNQDLKATVKRQATSVIPMP
LTFDKEKQLWKVAGWFIESSEETEELIPSKLLAFEGYTDDETFKTQKFVSTFKSYYSSGNIQHILTYNKEGKEDGKYDSY
YDEKGKLAETLVFKNGLINGEYIIYHENGAIESKRHFIDSKIADGECPHYYDNGNIKENHSYLNNKLEGKYFEYFPDGKI
KDERTYHAGKVVGKYTVYFESGKIRAIYNKNNKDQYHGTNEEYSPEGQLVSKSTYKEGKKLSSQTWYKNGKMRQEEIYDN
EGRKNGVSREWFDNGQLNTSTSYKNDILDGDSQKWNEQGEIVSLSPYKDGKLQGEHKYYDSGKLLYTTMYKNDKKDGPDR
RWSINTGKLIEEMPYVEGIRSGIKKEFNDRTGRLLTTTPYVNNEIQGTGETYNADGVSIIHCYINNKSIDSLYNPIEIRK
KASQSDDNAQYELGKYHYTCQDYDRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKEDQTKYFSYLLKAAQLGLSDAQVE
IGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLGWIYQNGDGTEKNLDKAKFHFTVAAKSGMREAYEELKKLESNK
>Mature_720_residues
MKKKLVALLILSYPSVAYLKQPPPAVPKPITFVAKIDNIDFNKTAIDSDMKLLLADRFHFKTKTPCNKNTLSGRPESFGL
TSEVYAEKIKSLLVEILSERYLFLTIDQCDRGGTPMLTNIEVCTEALCGAEFMKKESYLWLNQDLKATVKRQATSVIPMP
LTFDKEKQLWKVAGWFIESSEETEELIPSKLLAFEGYTDDETFKTQKFVSTFKSYYSSGNIQHILTYNKEGKEDGKYDSY
YDEKGKLAETLVFKNGLINGEYIIYHENGAIESKRHFIDSKIADGECPHYYDNGNIKENHSYLNNKLEGKYFEYFPDGKI
KDERTYHAGKVVGKYTVYFESGKIRAIYNKNNKDQYHGTNEEYSPEGQLVSKSTYKEGKKLSSQTWYKNGKMRQEEIYDN
EGRKNGVSREWFDNGQLNTSTSYKNDILDGDSQKWNEQGEIVSLSPYKDGKLQGEHKYYDSGKLLYTTMYKNDKKDGPDR
RWSINTGKLIEEMPYVEGIRSGIKKEFNDRTGRLLTTTPYVNNEIQGTGETYNADGVSIIHCYINNKSIDSLYNPIEIRK
KASQSDDNAQYELGKYHYTCQDYDRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKEDQTKYFSYLLKAAQLGLSDAQVE
IGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLGWIYQNGDGTEKNLDKAKFHFTVAAKSGMREAYEELKKLESNK

Specific function: Unknown

COG id: COG2849

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=164, Percent_Identity=31.7073170731707, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI151301150, Length=161, Percent_Identity=32.2981366459627, Blast_Score=70, Evalue=7e-12,
Organism=Escherichia coli, GI87081769, Length=129, Percent_Identity=38.7596899224806, Blast_Score=83, Evalue=5e-17,
Organism=Drosophila melanogaster, GI21355295, Length=158, Percent_Identity=32.2784810126582, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 82773; Mature: 82773

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLVALLILSYPSVAYLKQPPPAVPKPITFVAKIDNIDFNKTAIDSDMKLLLADRFHF
CCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCHHCCCCHHEEEHHHHCC
KTKTPCNKNTLSGRPESFGLTSEVYAEKIKSLLVEILSERYLFLTIDQCDRGGTPMLTNI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEH
EVCTEALCGAEFMKKESYLWLNQDLKATVKRQATSVIPMPLTFDKEKQLWKVAGWFIESS
HHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEECCC
EETEELIPSKLLAFEGYTDDETFKTQKFVSTFKSYYSSGNIQHILTYNKEGKEDGKYDSY
CHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC
YDEKGKLAETLVFKNGLINGEYIIYHENGAIESKRHFIDSKIADGECPHYYDNGNIKENH
CCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCEECCCCCCCCH
SYLNNKLEGKYFEYFPDGKIKDERTYHAGKVVGKYTVYFESGKIRAIYNKNNKDQYHGTN
HHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCCCCCC
EEYSPEGQLVSKSTYKEGKKLSSQTWYKNGKMRQEEIYDNEGRKNGVSREWFDNGQLNTS
CCCCCCCCEEECHHHHHHHHHCCHHHHCCCCCCHHHHHCCCCCCCCCCCHHCCCCCCCCC
TSYKNDILDGDSQKWNEQGEIVSLSPYKDGKLQGEHKYYDSGKLLYTTMYKNDKKDGPDR
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCC
RWSINTGKLIEEMPYVEGIRSGIKKEFNDRTGRLLTTTPYVNNEIQGTGETYNADGVSII
EEECCHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEECCCCEEEE
HCYINNKSIDSLYNPIEIRKKASQSDDNAQYELGKYHYTCQDYDRGLKWLEKSADHKNIK
EEEECCCCHHHHCCCHHHHHHCCCCCCCCEEEECCEEEEHHHHHHHHHHHHHCCCCCHHH
ALFLLAQMYNEGDGVKEDQTKYFSYLLKAAQLGLSDAQVEIGYLYLVGEGVEKNLPEAYQ
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCHHHCCCCHHE
WHIKAAEQGNVHAHYNLGWIYQNGDGTEKNLDKAKFHFTVAAKSGMREAYEELKKLESNK
EEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKKLVALLILSYPSVAYLKQPPPAVPKPITFVAKIDNIDFNKTAIDSDMKLLLADRFHF
CCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCHHCCCCHHEEEHHHHCC
KTKTPCNKNTLSGRPESFGLTSEVYAEKIKSLLVEILSERYLFLTIDQCDRGGTPMLTNI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEH
EVCTEALCGAEFMKKESYLWLNQDLKATVKRQATSVIPMPLTFDKEKQLWKVAGWFIESS
HHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEECCC
EETEELIPSKLLAFEGYTDDETFKTQKFVSTFKSYYSSGNIQHILTYNKEGKEDGKYDSY
CHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC
YDEKGKLAETLVFKNGLINGEYIIYHENGAIESKRHFIDSKIADGECPHYYDNGNIKENH
CCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCEECCCCCCCCH
SYLNNKLEGKYFEYFPDGKIKDERTYHAGKVVGKYTVYFESGKIRAIYNKNNKDQYHGTN
HHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCCCCCC
EEYSPEGQLVSKSTYKEGKKLSSQTWYKNGKMRQEEIYDNEGRKNGVSREWFDNGQLNTS
CCCCCCCCEEECHHHHHHHHHCCHHHHCCCCCCHHHHHCCCCCCCCCCCHHCCCCCCCCC
TSYKNDILDGDSQKWNEQGEIVSLSPYKDGKLQGEHKYYDSGKLLYTTMYKNDKKDGPDR
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCC
RWSINTGKLIEEMPYVEGIRSGIKKEFNDRTGRLLTTTPYVNNEIQGTGETYNADGVSII
EEECCHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEECCCCEEEE
HCYINNKSIDSLYNPIEIRKKASQSDDNAQYELGKYHYTCQDYDRGLKWLEKSADHKNIK
EEEECCCCHHHHCCCHHHHHHCCCCCCCCEEEECCEEEEHHHHHHHHHHHHHCCCCCHHH
ALFLLAQMYNEGDGVKEDQTKYFSYLLKAAQLGLSDAQVEIGYLYLVGEGVEKNLPEAYQ
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCHHHCCCCHHE
WHIKAAEQGNVHAHYNLGWIYQNGDGTEKNLDKAKFHFTVAAKSGMREAYEELKKLESNK
EEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]