| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170024437
Identifier: 170024437
GI number: 170024437
Start: 2445854
End: 2447572
Strand: Direct
Name: 170024437
Synonym: YPK_2208
Alternate gene names: NA
Gene position: 2445854-2447572 (Clockwise)
Preceding gene: 170024436
Following gene: 170024438
Centisome position: 52.16
GC content: 38.74
Gene sequence:
>1719_bases ATGAAACTGAAAATAAACTTTTTTTCAACTTTAGTCTATACCGCAACATTTTGCTCTGGCTTGAGCTTCGCTCATGCACA GACATTGCCCGATGTCTATTCAGTGGTTGAACGAAAACTGGAAAATGCCCTACCGCTGGCGGAACACCCCCATTATGATG CTCAGGCCCCTTATTTCGAACTGCACCGAGAAATCCTGATGTTTAGCTCACCAGAACGAGCCAATACGCTATTAAAGAAA CTTGATTTCAGTTCGAAAGAGGCAATGTTATCACTGAATATTTCTGCTGACTGGATTGCGGGAACAGGTAATCCAGACAA AGCAATGGTATTTTTATCACAGATTGGACTCGAGAAACCGAGCTCATTCTCAGCATACAAGAATTATGTTGATGCCTGGA TTGAAAAGAAACAGCCTGAATCTGCGTTAAAGTTACTTATGCTGGATAACAGTGCAAGGAACTATTATCTTCCCGCTGTT TTAGACGCTTATAGAGATACGCCAGATCAAGCGGTGACTATTTATAAAGATATTTATGGCGACAACATAATAGAACCGAC CAATCAATTAAGGATGCTGCTTGCTATTGCAGAAAATTATCGTGTCAACGGTGACCCCAAAAACACCCTTATTTATACCG ATAAAGCACAGGTAATGTTTATCGACGTGCTCAAAAAGAAGAAGAACAATGAAATTCATTTTTATAAAGATTACTTGAAT TTGATCAATCTATATTCATTTGCAGGTAATAAGCAACAAGCATTAATATTATCAGAACAGCTACTCAGGGCGGCCGGAGA TAAAGGTACCTATTATGATTTGGCATTATCCGGGATCATGGCATTTTACCATGCTAATGGTTTCACTGAAGAATACAATG CATTAATTGCAACCAGCATTGCCACTACAGATAAGTCCTTTAGCTTTGCTCCCAAGCCTATAGAAGAAATAAAGCTTATC CGGTTGTTGAATGCCACTAACGAAACCGGCCTAATTAAAGAGCGTATTGATAAGCTGATGATCTCACCAGAATATGCCTG TTATGACGATAGATATTGCTATGAATATAAAATAGATTCGCTTAATTTTCTATATTTAAGCAAATCTGATGCATTAGCTG ATAAATATTTAAACATTATTATTGAAGAATCACAAAATCAAAAATTCAATCCATGGGAAACGGTAACTAAATCCATCGTT AAAAAATTAGTTGATATTGGACGTATCGCCGAAGCTAAGAAGTTGGCTGCAGATGCAGAGGTTATTTATCTCTCACAGCT AAAAGACTCTCCGCCCAAAGAAGTCGAAAGAAATTATAGGGATCTTGCTGAAATGTATGGTTTTGCAGGCGATGTCGTCA GTGCTGAACGAATACTTAATAAGCATGTCACCACCGCCCAAAATTACTTTATTACCGATCTGTTTATAAAAAATAAACAG TGGGATGAAGCCAGAGCGCGTGTTGTGAAAGATACCGGTCTTTCTGGACAAAACCTGACGTTATTGCAAAATATTTGTGC TACCAATACACCTGAATGCATGCAACATATCACGTTCACACTTAAATCAATGTTAACGCGTGAATCCATTACCGCAGAAG ATGCATCAGGGAATCAACAACTCTACCAGTTGGGGATCATCTACCACTCTCTTGGGATAAAGCCGACCGAGGAACAACAG CTTCTCATTCAAAAATTATATGATAATGCGGCGGCCTAA
Upstream 100 bases:
>100_bases CTATGAAGAATTAAAAAAATTAGAATCCAACAAGTAAATAATTTTAATAATGGGGTCTGGATTAATCAGACCTCATAAAA TTGATCATGGATAAGATTAT
Downstream 100 bases:
>100_bases AAGATAACCTTATTGAGGAGCTGGCAATATTGAGGAGCAGGCAATTAAATGTTGTCTGCTTTCTTTTAAAGATGACAAGT GAAAATTTTGAGACACTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 572; Mature: 572
Protein sequence:
>572_residues MKLKINFFSTLVYTATFCSGLSFAHAQTLPDVYSVVERKLENALPLAEHPHYDAQAPYFELHREILMFSSPERANTLLKK LDFSSKEAMLSLNISADWIAGTGNPDKAMVFLSQIGLEKPSSFSAYKNYVDAWIEKKQPESALKLLMLDNSARNYYLPAV LDAYRDTPDQAVTIYKDIYGDNIIEPTNQLRMLLAIAENYRVNGDPKNTLIYTDKAQVMFIDVLKKKKNNEIHFYKDYLN LINLYSFAGNKQQALILSEQLLRAAGDKGTYYDLALSGIMAFYHANGFTEEYNALIATSIATTDKSFSFAPKPIEEIKLI RLLNATNETGLIKERIDKLMISPEYACYDDRYCYEYKIDSLNFLYLSKSDALADKYLNIIIEESQNQKFNPWETVTKSIV KKLVDIGRIAEAKKLAADAEVIYLSQLKDSPPKEVERNYRDLAEMYGFAGDVVSAERILNKHVTTAQNYFITDLFIKNKQ WDEARARVVKDTGLSGQNLTLLQNICATNTPECMQHITFTLKSMLTRESITAEDASGNQQLYQLGIIYHSLGIKPTEEQQ LLIQKLYDNAAA
Sequences:
>Translated_572_residues MKLKINFFSTLVYTATFCSGLSFAHAQTLPDVYSVVERKLENALPLAEHPHYDAQAPYFELHREILMFSSPERANTLLKK LDFSSKEAMLSLNISADWIAGTGNPDKAMVFLSQIGLEKPSSFSAYKNYVDAWIEKKQPESALKLLMLDNSARNYYLPAV LDAYRDTPDQAVTIYKDIYGDNIIEPTNQLRMLLAIAENYRVNGDPKNTLIYTDKAQVMFIDVLKKKKNNEIHFYKDYLN LINLYSFAGNKQQALILSEQLLRAAGDKGTYYDLALSGIMAFYHANGFTEEYNALIATSIATTDKSFSFAPKPIEEIKLI RLLNATNETGLIKERIDKLMISPEYACYDDRYCYEYKIDSLNFLYLSKSDALADKYLNIIIEESQNQKFNPWETVTKSIV KKLVDIGRIAEAKKLAADAEVIYLSQLKDSPPKEVERNYRDLAEMYGFAGDVVSAERILNKHVTTAQNYFITDLFIKNKQ WDEARARVVKDTGLSGQNLTLLQNICATNTPECMQHITFTLKSMLTRESITAEDASGNQQLYQLGIIYHSLGIKPTEEQQ LLIQKLYDNAAA >Mature_572_residues MKLKINFFSTLVYTATFCSGLSFAHAQTLPDVYSVVERKLENALPLAEHPHYDAQAPYFELHREILMFSSPERANTLLKK LDFSSKEAMLSLNISADWIAGTGNPDKAMVFLSQIGLEKPSSFSAYKNYVDAWIEKKQPESALKLLMLDNSARNYYLPAV LDAYRDTPDQAVTIYKDIYGDNIIEPTNQLRMLLAIAENYRVNGDPKNTLIYTDKAQVMFIDVLKKKKNNEIHFYKDYLN LINLYSFAGNKQQALILSEQLLRAAGDKGTYYDLALSGIMAFYHANGFTEEYNALIATSIATTDKSFSFAPKPIEEIKLI RLLNATNETGLIKERIDKLMISPEYACYDDRYCYEYKIDSLNFLYLSKSDALADKYLNIIIEESQNQKFNPWETVTKSIV KKLVDIGRIAEAKKLAADAEVIYLSQLKDSPPKEVERNYRDLAEMYGFAGDVVSAERILNKHVTTAQNYFITDLFIKNKQ WDEARARVVKDTGLSGQNLTLLQNICATNTPECMQHITFTLKSMLTRESITAEDASGNQQLYQLGIIYHSLGIKPTEEQQ LLIQKLYDNAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65035; Mature: 65035
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKINFFSTLVYTATFCSGLSFAHAQTLPDVYSVVERKLENALPLAEHPHYDAQAPYFE CEEEEHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH LHREILMFSSPERANTLLKKLDFSSKEAMLSLNISADWIAGTGNPDKAMVFLSQIGLEKP HHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHCCCCC SSFSAYKNYVDAWIEKKQPESALKLLMLDNSARNYYLPAVLDAYRDTPDQAVTIYKDIYG CCHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCEECHHHHHHHCCCCCHHEEHHHHHCC DNIIEPTNQLRMLLAIAENYRVNGDPKNTLIYTDKAQVMFIDVLKKKKNNEIHFYKDYLN CCCCCCHHHHHHHHHHHHCCEECCCCCCCEEEECCCCEEEHHHHHHCCCCCEEEEHHHHH LINLYSFAGNKQQALILSEQLLRAAGDKGTYYDLALSGIMAFYHANGFTEEYNALIATSI HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHEEEEE ATTDKSFSFAPKPIEEIKLIRLLNATNETGLIKERIDKLMISPEYACYDDRYCYEYKIDS EECCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECC LNFLYLSKSDALADKYLNIIIEESQNQKFNPWETVTKSIVKKLVDIGRIAEAKKLAADAE EEEEEEECCHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VIYLSQLKDSPPKEVERNYRDLAEMYGFAGDVVSAERILNKHVTTAQNYFITDLFIKNKQ EEEEEHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCC WDEARARVVKDTGLSGQNLTLLQNICATNTPECMQHITFTLKSMLTRESITAEDASGNQQ HHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH LYQLGIIYHSLGIKPTEEQQLLIQKLYDNAAA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLKINFFSTLVYTATFCSGLSFAHAQTLPDVYSVVERKLENALPLAEHPHYDAQAPYFE CEEEEHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH LHREILMFSSPERANTLLKKLDFSSKEAMLSLNISADWIAGTGNPDKAMVFLSQIGLEKP HHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHCCCCC SSFSAYKNYVDAWIEKKQPESALKLLMLDNSARNYYLPAVLDAYRDTPDQAVTIYKDIYG CCHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCEECHHHHHHHCCCCCHHEEHHHHHCC DNIIEPTNQLRMLLAIAENYRVNGDPKNTLIYTDKAQVMFIDVLKKKKNNEIHFYKDYLN CCCCCCHHHHHHHHHHHHCCEECCCCCCCEEEECCCCEEEHHHHHHCCCCCEEEEHHHHH LINLYSFAGNKQQALILSEQLLRAAGDKGTYYDLALSGIMAFYHANGFTEEYNALIATSI HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHEEEEE ATTDKSFSFAPKPIEEIKLIRLLNATNETGLIKERIDKLMISPEYACYDDRYCYEYKIDS EECCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECC LNFLYLSKSDALADKYLNIIIEESQNQKFNPWETVTKSIVKKLVDIGRIAEAKKLAADAE EEEEEEECCHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VIYLSQLKDSPPKEVERNYRDLAEMYGFAGDVVSAERILNKHVTTAQNYFITDLFIKNKQ EEEEEHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCC WDEARARVVKDTGLSGQNLTLLQNICATNTPECMQHITFTLKSMLTRESITAEDASGNQQ HHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH LYQLGIIYHSLGIKPTEEQQLLIQKLYDNAAA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA