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The map label for this gene is 170024404

Identifier: 170024404

GI number: 170024404

Start: 2410648

End: 2411523

Strand: Direct

Name: 170024404

Synonym: YPK_2172

Alternate gene names: NA

Gene position: 2410648-2411523 (Clockwise)

Preceding gene: 170024403

Following gene: 170024405

Centisome position: 51.41

GC content: 42.81

Gene sequence:

>876_bases
ATGAAAAATAAAAAAAATTATCTTATTTCTCTATTATTCACTGTTTACTTCACCTCAGCCACTGCCTCCCCACTGATTGT
GGCACACAGAGCTGGCACTGCAGATTATCCAGAAAATACGGTGCATGCCATTAGTATGGCAATAAAGAATCAGGCGGATG
TTATTTGGCTTTCCATCCAACTTACTCGCGACGGTATTCCGGTGCTGTACCGCCCGAGTGATCTTAAAAGCCTTACTAAT
AGTGAGGGCCTTATTTCAGAACACTCTTTATTGGAAATAAAAATGCTAGATGCTGCTCATTTTTTTAAGACCGAAGGCCA
GTATTTTTACCGTGGGCGAGGGATGAAAATTCCTTCGTTGCAAGATGTCTTCACCCGATTCCCCAAAAACCACTTCATCC
TCGACATCAAATCACCCGACGCCGATCCCGTCATCATGGCAAATATATTATCAACGCTGATCACCAGTAATAACCTGCTT
GATAAGGTCACTCTCTATTCCACGGACATAAAGTATTTGGATGCTTTACCTGATAGCATTAATAAATTTGAAAACCGTCA
TGTGACACGAAAAATACTGACCAACGCGGTCATGGCAAACGACTGTAAAATCTCCGCTAAACGAGATAAAACGCAATATC
ATGCATTTGAATTAAGGCGTGAGGTGAAAGTCGTTGAAAAATTCACCCTCGGCAAAGGGGCTTCGCGCGCACAACTCGTC
TGGAATCAGCAAGCCATGGACTGTTTTAAGAAAAACAGTAACAGCAAGATTCTGCTCATTGGTATAAATTCTGCTGAGGA
TTATCAGCTCGCCAAGGATCTAGGAGCAGATTATGTGATGACTGACTCCCCCGCCACCGCCAAAAATTGGCGTTAA

Upstream 100 bases:

>100_bases
CTTGAATACCCTCCTATTTATTTGATGGCAGCCCGTGCCCTATTTCCATGCTACAACATTAAATATATTTAAAGTTGGAT
ATATTAATAAGGAGCATGGG

Downstream 100 bases:

>100_bases
ATTCACCTAATCTGGCTGTGACTTACGCTATATGCATGAGGAATAACCAGATGAATTGAAACGGCTAAATACTGCTTGAC
CATGAGGCCGCCGCCCCCTA

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MKNKKNYLISLLFTVYFTSATASPLIVAHRAGTADYPENTVHAISMAIKNQADVIWLSIQLTRDGIPVLYRPSDLKSLTN
SEGLISEHSLLEIKMLDAAHFFKTEGQYFYRGRGMKIPSLQDVFTRFPKNHFILDIKSPDADPVIMANILSTLITSNNLL
DKVTLYSTDIKYLDALPDSINKFENRHVTRKILTNAVMANDCKISAKRDKTQYHAFELRREVKVVEKFTLGKGASRAQLV
WNQQAMDCFKKNSNSKILLIGINSAEDYQLAKDLGADYVMTDSPATAKNWR

Sequences:

>Translated_291_residues
MKNKKNYLISLLFTVYFTSATASPLIVAHRAGTADYPENTVHAISMAIKNQADVIWLSIQLTRDGIPVLYRPSDLKSLTN
SEGLISEHSLLEIKMLDAAHFFKTEGQYFYRGRGMKIPSLQDVFTRFPKNHFILDIKSPDADPVIMANILSTLITSNNLL
DKVTLYSTDIKYLDALPDSINKFENRHVTRKILTNAVMANDCKISAKRDKTQYHAFELRREVKVVEKFTLGKGASRAQLV
WNQQAMDCFKKNSNSKILLIGINSAEDYQLAKDLGADYVMTDSPATAKNWR
>Mature_291_residues
MKNKKNYLISLLFTVYFTSATASPLIVAHRAGTADYPENTVHAISMAIKNQADVIWLSIQLTRDGIPVLYRPSDLKSLTN
SEGLISEHSLLEIKMLDAAHFFKTEGQYFYRGRGMKIPSLQDVFTRFPKNHFILDIKSPDADPVIMANILSTLITSNNLL
DKVTLYSTDIKYLDALPDSINKFENRHVTRKILTNAVMANDCKISAKRDKTQYHAFELRREVKVVEKFTLGKGASRAQLV
WNQQAMDCFKKNSNSKILLIGINSAEDYQLAKDLGADYVMTDSPATAKNWR

Specific function: Unknown

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: NA

Molecular weight: Translated: 32915; Mature: 32915

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKKNYLISLLFTVYFTSATASPLIVAHRAGTADYPENTVHAISMAIKNQADVIWLSIQ
CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEE
LTRDGIPVLYRPSDLKSLTNSEGLISEHSLLEIKMLDAAHFFKTEGQYFYRGRGMKIPSL
EECCCCCEEECCHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHCCCCEEEECCCCCCCCH
QDVFTRFPKNHFILDIKSPDADPVIMANILSTLITSNNLLDKVTLYSTDIKYLDALPDSI
HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHEEEEEECCHHHHHHCCHHH
NKFENRHVTRKILTNAVMANDCKISAKRDKTQYHAFELRREVKVVEKFTLGKGASRAQLV
HHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEE
WNQQAMDCFKKNSNSKILLIGINSAEDYQLAKDLGADYVMTDSPATAKNWR
ECHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MKNKKNYLISLLFTVYFTSATASPLIVAHRAGTADYPENTVHAISMAIKNQADVIWLSIQ
CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEE
LTRDGIPVLYRPSDLKSLTNSEGLISEHSLLEIKMLDAAHFFKTEGQYFYRGRGMKIPSL
EECCCCCEEECCHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHCCCCEEEECCCCCCCCH
QDVFTRFPKNHFILDIKSPDADPVIMANILSTLITSNNLLDKVTLYSTDIKYLDALPDSI
HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHEEEEEECCHHHHHHCCHHH
NKFENRHVTRKILTNAVMANDCKISAKRDKTQYHAFELRREVKVVEKFTLGKGASRAQLV
HHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEE
WNQQAMDCFKKNSNSKILLIGINSAEDYQLAKDLGADYVMTDSPATAKNWR
ECHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]