Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is 170024403

Identifier: 170024403

GI number: 170024403

Start: 2409265

End: 2410347

Strand: Direct

Name: 170024403

Synonym: YPK_2171

Alternate gene names: NA

Gene position: 2409265-2410347 (Clockwise)

Preceding gene: 170024402

Following gene: 170024404

Centisome position: 51.38

GC content: 50.97

Gene sequence:

>1083_bases
ATGAAAAAAACACTGATAACGCTAATGAGCGGGCTGTTATTCAGTTCGCTAACACTCGCAGCCCAGACCAGCGACTGGGA
CTCTGTGGTTGCGCAGGCAAAAAAAGAAGGCAGCGTGACTTTTAACGTTTGGTATCTACAACCACAGTGGCGCAGTTTTG
TGAAAGATTTTGAACAAAAGTACGACATCAAGGTGCGTATTCCAGAAGGCAGCATTGACGGCAATATGAACAAATTACTG
GCAGAGACACGCCGGGAGCAAGGGAAGATCGATGTCATTGCCCTCTCTATCGCACAATTACCGATCACGATGGGCGCGAA
ATCACTGGCTAAAGTGGATGATTTACCGGGTTATCAGGATGCGTATCACCAGTTACAGAACGTCGATACCCAAGGTTACG
CCGTAGCATTCTGGGGCAACCAGACCGGTTTTGCCTACGATCCCCAACAGATGGGTGATCGACCATTGCCACAGACCATG
GAGGAACTCCAACGCTTTATCGACGCCAATCCGAAGCGGTTCGGTTATAACGATCCGAACAACGGGGGGGCGGGGGAAGC
CTTTATCCAACGCATCGTCACCACGCTGAGCGGCGACTTTAGCAGCGACTCTGACACTGTTGACCCAACGGTAATAAAAA
ACTGGCAGAAAGGTTGGCAATGGTTTGCGTCCAATAATAACAATATTACCCGCACGGCGTCCGGTGCCGATAGCCTGACA
CGCCTCAACGATGGCGAACTGATGCTGACACCTGCCTGGGAAGACCACCTCTCCGGCTTACAAAAGACCGGCGCAATCAC
CTCTAGGTTGAAATTCTATGTGCCTGAGTTTGGTATGCCCGGCGGTGGCAATATTGCCAGTATCGCAGCCAACAGCCCGC
ATCCGGCGGCCTCCAGGGTGTTCCTAAACTGGCTGATTCAGGCAGATACCCAGAAAGCGCTGAACGAGGCGTTCGGTTCC
ACCCCAATGAACAAGCAACTGAATACTGATGTAAAACAGCCTGACACACCCGTTCAGTTTTACGGTAAGGCGTACAGTAT
GCAGATGAAAAAAGAGTTTGCTCGTCAGGTAATGACACGATAA

Upstream 100 bases:

>100_bases
ATCCCAAATGTCATTTTGATGATCATCATTGAGAAGCTTTTGAAGGGTAATTATCTGTCACAGTCCACCGGGAAAGCCTG
ATTTTACAGGAGATAATCAC

Downstream 100 bases:

>100_bases
ATCTGGCGACACAAAAAGGCAGAACGCAGAAGGTTCATGGTTAGGAAATTTGCTGATATTTTTTGTTCTGTTTCCCTGGC
GGGTACAGTCGCTGTATTGT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKKTLITLMSGLLFSSLTLAAQTSDWDSVVAQAKKEGSVTFNVWYLQPQWRSFVKDFEQKYDIKVRIPEGSIDGNMNKLL
AETRREQGKIDVIALSIAQLPITMGAKSLAKVDDLPGYQDAYHQLQNVDTQGYAVAFWGNQTGFAYDPQQMGDRPLPQTM
EELQRFIDANPKRFGYNDPNNGGAGEAFIQRIVTTLSGDFSSDSDTVDPTVIKNWQKGWQWFASNNNNITRTASGADSLT
RLNDGELMLTPAWEDHLSGLQKTGAITSRLKFYVPEFGMPGGGNIASIAANSPHPAASRVFLNWLIQADTQKALNEAFGS
TPMNKQLNTDVKQPDTPVQFYGKAYSMQMKKEFARQVMTR

Sequences:

>Translated_360_residues
MKKTLITLMSGLLFSSLTLAAQTSDWDSVVAQAKKEGSVTFNVWYLQPQWRSFVKDFEQKYDIKVRIPEGSIDGNMNKLL
AETRREQGKIDVIALSIAQLPITMGAKSLAKVDDLPGYQDAYHQLQNVDTQGYAVAFWGNQTGFAYDPQQMGDRPLPQTM
EELQRFIDANPKRFGYNDPNNGGAGEAFIQRIVTTLSGDFSSDSDTVDPTVIKNWQKGWQWFASNNNNITRTASGADSLT
RLNDGELMLTPAWEDHLSGLQKTGAITSRLKFYVPEFGMPGGGNIASIAANSPHPAASRVFLNWLIQADTQKALNEAFGS
TPMNKQLNTDVKQPDTPVQFYGKAYSMQMKKEFARQVMTR
>Mature_360_residues
MKKTLITLMSGLLFSSLTLAAQTSDWDSVVAQAKKEGSVTFNVWYLQPQWRSFVKDFEQKYDIKVRIPEGSIDGNMNKLL
AETRREQGKIDVIALSIAQLPITMGAKSLAKVDDLPGYQDAYHQLQNVDTQGYAVAFWGNQTGFAYDPQQMGDRPLPQTM
EELQRFIDANPKRFGYNDPNNGGAGEAFIQRIVTTLSGDFSSDSDTVDPTVIKNWQKGWQWFASNNNNITRTASGADSLT
RLNDGELMLTPAWEDHLSGLQKTGAITSRLKFYVPEFGMPGGGNIASIAANSPHPAASRVFLNWLIQADTQKALNEAFGS
TPMNKQLNTDVKQPDTPVQFYGKAYSMQMKKEFARQVMTR

Specific function: Unknown

COG id: COG4134

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40103; Mature: 40103

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLITLMSGLLFSSLTLAAQTSDWDSVVAQAKKEGSVTFNVWYLQPQWRSFVKDFEQK
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHC
YDIKVRIPEGSIDGNMNKLLAETRREQGKIDVIALSIAQLPITMGAKSLAKVDDLPGYQD
CCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEHHHCCHHHCHHHHHHHHCCCCHHH
AYHQLQNVDTQGYAVAFWGNQTGFAYDPQQMGDRPLPQTMEELQRFIDANPKRFGYNDPN
HHHHHHCCCCCCEEEEEECCCCCCEECHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
NGGAGEAFIQRIVTTLSGDFSSDSDTVDPTVIKNWQKGWQWFASNNNNITRTASGADSLT
CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCEEEECCCCHHHH
RLNDGELMLTPAWEDHLSGLQKTGAITSRLKFYVPEFGMPGGGNIASIAANSPHPAASRV
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHH
FLNWLIQADTQKALNEAFGSTPMNKQLNTDVKQPDTPVQFYGKAYSMQMKKEFARQVMTR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKTLITLMSGLLFSSLTLAAQTSDWDSVVAQAKKEGSVTFNVWYLQPQWRSFVKDFEQK
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHC
YDIKVRIPEGSIDGNMNKLLAETRREQGKIDVIALSIAQLPITMGAKSLAKVDDLPGYQD
CCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEHHHCCHHHCHHHHHHHHCCCCHHH
AYHQLQNVDTQGYAVAFWGNQTGFAYDPQQMGDRPLPQTMEELQRFIDANPKRFGYNDPN
HHHHHHCCCCCCEEEEEECCCCCCEECHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
NGGAGEAFIQRIVTTLSGDFSSDSDTVDPTVIKNWQKGWQWFASNNNNITRTASGADSLT
CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCEEEECCCCHHHH
RLNDGELMLTPAWEDHLSGLQKTGAITSRLKFYVPEFGMPGGGNIASIAANSPHPAASRV
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHH
FLNWLIQADTQKALNEAFGSTPMNKQLNTDVKQPDTPVQFYGKAYSMQMKKEFARQVMTR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA