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The map label for this gene is cmoB [H]

Identifier: 170024386

GI number: 170024386

Start: 2383219

End: 2384190

Strand: Direct

Name: cmoB [H]

Synonym: YPK_2152

Alternate gene names: 170024386

Gene position: 2383219-2384190 (Clockwise)

Preceding gene: 170024385

Following gene: 170024389

Centisome position: 50.82

GC content: 52.78

Gene sequence:

>972_bases
ATGATTGAATTTGGCGATTTTTATCGGCTGATTGCCAAAGGCCCATTAAGCCCATGGTTAGATACTCTGCCCGCACAGCT
CAGCGCCTGGCAGCGCGAATCGTTACACGGTAAATTTAAAACCTGGTTTAACGCCGTGGAACATTTGCCTCAACTGACGC
CCACCACACTGGATCTACACTCAGGCGTAAGGGCCGAAATGTCCCCGCCCATTTCGGCTGGGCAACGTGAAGGAATGGAG
AATATGCTGCGCGCCCTGATGCCTTGGCGCAAAGGCCCCTTCTCGCTATATGGGTTGGAGATCGATACCGAATGGCGTTC
AGATTGGAAGTGGCAACGGGTCTTGCCCCATATCAGCCCACTGGCAGGCCGTACTATTCTGGATGTCGGCTGCGGCAGCG
GTTACCACCTGTGGCGCATGATTGGTGAAGGTGCCCATCTGGCGGTCGGCATTGATCCAATGCAGCTATTTTTATGTCAG
TTTGAAGCGATCCGTAAGCTTTTGGGGGGCGATCAGCGAGCGCATGTCCTGCCTCTTGGCATTGAACAACTGCCGGAATT
GGCTGCTTTTGATACCGTGTTTTCCATGGGGGTGCTGTATCACCGCCGTTCGCCACTGGATCACCTCTATCAACTTAAAA
ACCAGTTAGTTACTGACGGAGAACTGGTGCTAGAGACACTGGTCGTCGAAGGGGACAGCCAACAAGTGTTGGTGCCAGGT
GATCGTTACGCGCAAATGCGCAATGTGTACTTTATTCCTTCGGCACCCGCCCTAAAAGCCTGGCTGGAGAAGTGTGGTTT
CGTTGATGTCAGAATAGCGGATATGGCCGTGACTACGACTGAAGAGCAGCGTCGTACTGATTGGATGACCAGTGAATCAT
TAGCCGAGTTCCTTGACCCGCACGATCACAGTAAAACGGTAGAAGGCTATCCGGCACCACTAAGAGCGGTGTTAATCGCC
CGTAAGCCATAA

Upstream 100 bases:

>100_bases
ACAAAAATCGTCTGCATCAGGCGGGGTTTGAACACGCGGAAGTCTGGTTCCAATGCTTTAATTTTGGTTCACTGATTGCC
CTGAAAGCAGGAGAGGCTCA

Downstream 100 bases:

>100_bases
GAAAATCCCCCAACTCACCCAGATGGGGGATACCGTTCGTTATATTCCAAACAAGTGGTGTTACTACAGGGCAAAACGCG
CGAATCCCCGAATTGACACC

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MIEFGDFYRLIAKGPLSPWLDTLPAQLSAWQRESLHGKFKTWFNAVEHLPQLTPTTLDLHSGVRAEMSPPISAGQREGME
NMLRALMPWRKGPFSLYGLEIDTEWRSDWKWQRVLPHISPLAGRTILDVGCGSGYHLWRMIGEGAHLAVGIDPMQLFLCQ
FEAIRKLLGGDQRAHVLPLGIEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVTDGELVLETLVVEGDSQQVLVPG
DRYAQMRNVYFIPSAPALKAWLEKCGFVDVRIADMAVTTTEEQRRTDWMTSESLAEFLDPHDHSKTVEGYPAPLRAVLIA
RKP

Sequences:

>Translated_323_residues
MIEFGDFYRLIAKGPLSPWLDTLPAQLSAWQRESLHGKFKTWFNAVEHLPQLTPTTLDLHSGVRAEMSPPISAGQREGME
NMLRALMPWRKGPFSLYGLEIDTEWRSDWKWQRVLPHISPLAGRTILDVGCGSGYHLWRMIGEGAHLAVGIDPMQLFLCQ
FEAIRKLLGGDQRAHVLPLGIEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVTDGELVLETLVVEGDSQQVLVPG
DRYAQMRNVYFIPSAPALKAWLEKCGFVDVRIADMAVTTTEEQRRTDWMTSESLAEFLDPHDHSKTVEGYPAPLRAVLIA
RKP
>Mature_323_residues
MIEFGDFYRLIAKGPLSPWLDTLPAQLSAWQRESLHGKFKTWFNAVEHLPQLTPTTLDLHSGVRAEMSPPISAGQREGME
NMLRALMPWRKGPFSLYGLEIDTEWRSDWKWQRVLPHISPLAGRTILDVGCGSGYHLWRMIGEGAHLAVGIDPMQLFLCQ
FEAIRKLLGGDQRAHVLPLGIEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVTDGELVLETLVVEGDSQQVLVPG
DRYAQMRNVYFIPSAPALKAWLEKCGFVDVRIADMAVTTTEEQRRTDWMTSESLAEFLDPHDHSKTVEGYPAPLRAVLIA
RKP

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family [H]

Homologues:

Organism=Escherichia coli, GI1788178, Length=323, Percent_Identity=77.0897832817337, Blast_Score=523, Evalue=1e-150,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010017 [H]

Pfam domain/function: PF08003 Methyltransf_9 [H]

EC number: NA

Molecular weight: Translated: 36581; Mature: 36581

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFGDFYRLIAKGPLSPWLDTLPAQLSAWQRESLHGKFKTWFNAVEHLPQLTPTTLDLH
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEHHC
SGVRAEMSPPISAGQREGMENMLRALMPWRKGPFSLYGLEIDTEWRSDWKWQRVLPHISP
CCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHCCCCCC
LAGRTILDVGCGSGYHLWRMIGEGAHLAVGIDPMQLFLCQFEAIRKLLGGDQRAHVLPLG
CCCCEEEEECCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEECC
IEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVTDGELVLETLVVEGDSQQVLVPG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECC
DRYAQMRNVYFIPSAPALKAWLEKCGFVDVRIADMAVTTTEEQRRTDWMTSESLAEFLDP
HHHHHHCCEEECCCCHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHCCCHHHHHHHCCC
HDHSKTVEGYPAPLRAVLIARKP
CCCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MIEFGDFYRLIAKGPLSPWLDTLPAQLSAWQRESLHGKFKTWFNAVEHLPQLTPTTLDLH
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEHHC
SGVRAEMSPPISAGQREGMENMLRALMPWRKGPFSLYGLEIDTEWRSDWKWQRVLPHISP
CCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHCCCCCC
LAGRTILDVGCGSGYHLWRMIGEGAHLAVGIDPMQLFLCQFEAIRKLLGGDQRAHVLPLG
CCCCEEEEECCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEECC
IEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVTDGELVLETLVVEGDSQQVLVPG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECC
DRYAQMRNVYFIPSAPALKAWLEKCGFVDVRIADMAVTTTEEQRRTDWMTSESLAEFLDP
HHHHHHCCEEECCCCHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHCCCHHHHHHHCCC
HDHSKTVEGYPAPLRAVLIARKP
CCCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA