Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170024348

Identifier: 170024348

GI number: 170024348

Start: 2345237

End: 2345977

Strand: Direct

Name: 170024348

Synonym: YPK_2114

Alternate gene names: NA

Gene position: 2345237-2345977 (Clockwise)

Preceding gene: 170024345

Following gene: 170024349

Centisome position: 50.01

GC content: 51.69

Gene sequence:

>741_bases
ATGGACCAACAAAACACTCACATTGGCATACTTGCCGGGAACTCCCGTGTTTATCTTGATAATAACGGCATGGTTGCCAT
TGAGGCTCAATTAAATGCCTTTGATGCAGCACTGCGGCTCGCCCGACAATCCCTGGATAGTGGAAATTTGCTGCCGAAGT
TGTCCGTAGCGTTCGATCACCTCGGTATTTTTCGCCTTCAGTTTCTGACAGAAAACCTTTCTAACGCCCAAAAACGCCGC
CCGCGCCTAAGCCATCTCCATCCGTTAATCCAGCAGGTTTTTCTGCCTATTGCGGAAAAGTATCAGATAGATCTCAGTGA
TATCCGCGCGATCCACGAAGATTCAGCCCGACAGCACCTTGTCCATATCCTCGCGACCCAAGATATTCCTGAAAGGCTCA
CCCGCAGGATGCTAACCGGAGCAGCCTCACGACCAAACGGTGATACGCATAATGAGACGCCAACACAAAAGCTCACCTGT
GCGGCTATCACCAAAGAGTATTTTGAACGGGCAGCGAGCGACCATCAGGATCCGCAAGCGGTTCTGGAAGTGTTCTTTGA
AAATAGCCCTTGGTCCAGAAGCCTGGCCTATGTTCGCGGGCTCCAGCTCAGCCACTTGCTAGGTGTCCCAGCCGCCATTC
GCCTTAATCTGGTCAATGAGGCCGGTGAAGTCAGTCGGGGGGAGAAAATAATCGCTCAATTCACCTCTGCCCCAAAAAAG
CCGTTGTCGTCTCGCTCATGA

Upstream 100 bases:

>100_bases
GCTGAAAGGAAAGTAAATATTTTCAATTCGTATAAACAAGACGAAATTCTCATTTTTGTATAAAGAAAAATACGTCATCA
CTCAAAGGAAACTGAGAAAC

Downstream 100 bases:

>100_bases
TTAAGGAAAAATCATTATGTACAGTCAGAACCCACCGATATATCTCGATAATAACGCGACAACGGCACTAGACCCTGCCG
TCCTGCAGGCGATGATGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MDQQNTHIGILAGNSRVYLDNNGMVAIEAQLNAFDAALRLARQSLDSGNLLPKLSVAFDHLGIFRLQFLTENLSNAQKRR
PRLSHLHPLIQQVFLPIAEKYQIDLSDIRAIHEDSARQHLVHILATQDIPERLTRRMLTGAASRPNGDTHNETPTQKLTC
AAITKEYFERAASDHQDPQAVLEVFFENSPWSRSLAYVRGLQLSHLLGVPAAIRLNLVNEAGEVSRGEKIIAQFTSAPKK
PLSSRS

Sequences:

>Translated_246_residues
MDQQNTHIGILAGNSRVYLDNNGMVAIEAQLNAFDAALRLARQSLDSGNLLPKLSVAFDHLGIFRLQFLTENLSNAQKRR
PRLSHLHPLIQQVFLPIAEKYQIDLSDIRAIHEDSARQHLVHILATQDIPERLTRRMLTGAASRPNGDTHNETPTQKLTC
AAITKEYFERAASDHQDPQAVLEVFFENSPWSRSLAYVRGLQLSHLLGVPAAIRLNLVNEAGEVSRGEKIIAQFTSAPKK
PLSSRS
>Mature_246_residues
MDQQNTHIGILAGNSRVYLDNNGMVAIEAQLNAFDAALRLARQSLDSGNLLPKLSVAFDHLGIFRLQFLTENLSNAQKRR
PRLSHLHPLIQQVFLPIAEKYQIDLSDIRAIHEDSARQHLVHILATQDIPERLTRRMLTGAASRPNGDTHNETPTQKLTC
AAITKEYFERAASDHQDPQAVLEVFFENSPWSRSLAYVRGLQLSHLLGVPAAIRLNLVNEAGEVSRGEKIIAQFTSAPKK
PLSSRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27453; Mature: 27453

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQQNTHIGILAGNSRVYLDNNGMVAIEAQLNAFDAALRLARQSLDSGNLLPKLSVAFDH
CCCCCCEEEEEECCCEEEECCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LGIFRLQFLTENLSNAQKRRPRLSHLHPLIQQVFLPIAEKYQIDLSDIRAIHEDSARQHL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VHILATQDIPERLTRRMLTGAASRPNGDTHNETPTQKLTCAAITKEYFERAASDHQDPQA
HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
VLEVFFENSPWSRSLAYVRGLQLSHLLGVPAAIRLNLVNEAGEVSRGEKIIAQFTSAPKK
HHHHHHCCCCCHHHHHHHHCCHHHHHHCCCHHEEEEEHHCCCCHHHHHHHHHHHHCCCCC
PLSSRS
CCCCCC
>Mature Secondary Structure
MDQQNTHIGILAGNSRVYLDNNGMVAIEAQLNAFDAALRLARQSLDSGNLLPKLSVAFDH
CCCCCCEEEEEECCCEEEECCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LGIFRLQFLTENLSNAQKRRPRLSHLHPLIQQVFLPIAEKYQIDLSDIRAIHEDSARQHL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VHILATQDIPERLTRRMLTGAASRPNGDTHNETPTQKLTCAAITKEYFERAASDHQDPQA
HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
VLEVFFENSPWSRSLAYVRGLQLSHLLGVPAAIRLNLVNEAGEVSRGEKIIAQFTSAPKK
HHHHHHCCCCCHHHHHHHHCCHHHHHHCCCHHEEEEEHHCCCCHHHHHHHHHHHHCCCCC
PLSSRS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA