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The map label for this gene is dsbB [H]

Identifier: 170024345

GI number: 170024345

Start: 2342842

End: 2343483

Strand: Direct

Name: dsbB [H]

Synonym: YPK_2111

Alternate gene names: 170024345

Gene position: 2342842-2343483 (Clockwise)

Preceding gene: 170024344

Following gene: 170024348

Centisome position: 49.96

GC content: 44.08

Gene sequence:

>642_bases
ATGTTGCAATTCCTTAACCGCTGTTCCCGAGGACGCGGTGCTTGGCTATTAATGGCCCTGACTGCATTTCTATTAGAGTT
AACTGCGCTCTATTTTCAACACATTATGTTGCTACAACCGTGTGTAATGTGTATTTATGAGCGTGTCGCATTATTCGGTA
TTCTCGGTGCATCACTATTGGGTGCAATAGCCCCGAGATCACCACTACGCTATTTAGCTATTGCAGTTTGGATCTACAGC
GCGTGGAAAGGGGTTCAGCTAGCTTGGGCACACACTATGCTGCAGTTGAATCCATCCCCATTTAACACCTGCGATTTCTT
CGTCAACTTCCCTTCATGGCTACCCTTGGATAAATGGTTACCCGCCGTGTTCGCCGCCAGTGGCGATTGCTCGGAAAGAC
AATGGCAGTTTATGTCATTAGAAATGCCACAATGGTTAGTCGGTATTTTTGCTGCATATCTGGTTATCGCCGTACTCGTT
CTGATCAGCCAATTTGTTAAACCTAAAAGACGCGATCTGTTCGGCCGAAAATTTTTATACATATCTTTATTATCAATGGC
GCCTCTCTGGCGCCATTTTTATATCAGATTCAAACGGTCTGTTAATCCTAATGAACACTTAATTCCATGCAAAATATGGT
AG

Upstream 100 bases:

>100_bases
AAAACTAATTTTTACCTAATTTTGCTTTTGGGTAGCTGGCAGAAAAGATGAATTGGTTTACACTGCCGGTACAATTGCTT
ACTGCATGGAAAATAAAGAT

Downstream 100 bases:

>100_bases
AATTTACCTCCATATCCTGGCGGTAATAAATCATGTCCCTATTAGATGTGTTTAAATCTTTCTCCAGTAAAAGAATAAAT
GTCACTTGCCCTGAGTGTGC

Product: disulfide bond formation protein B

Products: NA

Alternate protein names: Disulfide oxidoreductase [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MLQFLNRCSRGRGAWLLMALTAFLLELTALYFQHIMLLQPCVMCIYERVALFGILGASLLGAIAPRSPLRYLAIAVWIYS
AWKGVQLAWAHTMLQLNPSPFNTCDFFVNFPSWLPLDKWLPAVFAASGDCSERQWQFMSLEMPQWLVGIFAAYLVIAVLV
LISQFVKPKRRDLFGRKFLYISLLSMAPLWRHFYIRFKRSVNPNEHLIPCKIW

Sequences:

>Translated_213_residues
MLQFLNRCSRGRGAWLLMALTAFLLELTALYFQHIMLLQPCVMCIYERVALFGILGASLLGAIAPRSPLRYLAIAVWIYS
AWKGVQLAWAHTMLQLNPSPFNTCDFFVNFPSWLPLDKWLPAVFAASGDCSERQWQFMSLEMPQWLVGIFAAYLVIAVLV
LISQFVKPKRRDLFGRKFLYISLLSMAPLWRHFYIRFKRSVNPNEHLIPCKIW
>Mature_213_residues
MLQFLNRCSRGRGAWLLMALTAFLLELTALYFQHIMLLQPCVMCIYERVALFGILGASLLGAIAPRSPLRYLAIAVWIYS
AWKGVQLAWAHTMLQLNPSPFNTCDFFVNFPSWLPLDKWLPAVFAASGDCSERQWQFMSLEMPQWLVGIFAAYLVIAVLV
LISQFVKPKRRDLFGRKFLYISLLSMAPLWRHFYIRFKRSVNPNEHLIPCKIW

Specific function: Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein [H]

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbB family [H]

Homologues:

Organism=Escherichia coli, GI1787433, Length=176, Percent_Identity=73.2954545454545, Blast_Score=281, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003752
- InterPro:   IPR022920 [H]

Pfam domain/function: PF02600 DsbB [H]

EC number: NA

Molecular weight: Translated: 24708; Mature: 24708

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQFLNRCSRGRGAWLLMALTAFLLELTALYFQHIMLLQPCVMCIYERVALFGILGASLL
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIAPRSPLRYLAIAVWIYSAWKGVQLAWAHTMLQLNPSPFNTCDFFVNFPSWLPLDKWL
HHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCHHHHEEECCCCCCHHHHH
PAVFAASGDCSERQWQFMSLEMPQWLVGIFAAYLVIAVLVLISQFVKPKRRDLFGRKFLY
HHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
ISLLSMAPLWRHFYIRFKRSVNPNEHLIPCKIW
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
>Mature Secondary Structure
MLQFLNRCSRGRGAWLLMALTAFLLELTALYFQHIMLLQPCVMCIYERVALFGILGASLL
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIAPRSPLRYLAIAVWIYSAWKGVQLAWAHTMLQLNPSPFNTCDFFVNFPSWLPLDKWL
HHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCHHHHEEECCCCCCHHHHH
PAVFAASGDCSERQWQFMSLEMPQWLVGIFAAYLVIAVLVLISQFVKPKRRDLFGRKFLY
HHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
ISLLSMAPLWRHFYIRFKRSVNPNEHLIPCKIW
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA