| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023482
Identifier: 170023482
GI number: 170023482
Start: 1361899
End: 1363470
Strand: Direct
Name: 170023482
Synonym: YPK_1236
Alternate gene names: NA
Gene position: 1361899-1363470 (Clockwise)
Preceding gene: 170023481
Following gene: 170023483
Centisome position: 29.04
GC content: 47.33
Gene sequence:
>1572_bases ATGAACTTGCTCGAGGCGTTTTACTACACGTTTGCAGCAGACGCTTCAGGGCTTGATCGTGGGCTGACTGATGCAGAAAA AAAGGCCGAGAAATTAAAAAACTCGGTATCAAGTGCCGATGCCGCGTCTGAAAAATTGGGCGCGTCATTTTTAAGCCTGG CGAAAGCTGGCGTCGCATTGCTGGGCGTCACATTAACACTCGGCGGCATTAAAGCGCTGGCGTTAGGGACAGCAGAAACA ACAAGTGAGCTAGGAAAACAGGCCCGGCAAATGAACGTCAACGTATCGACGTTGGACGCGTGGCGCAAGACCATCACAGA AAGCGGCGGCGATGCTGAAGCCTTCACGCGCACGCTCGGCAATATGGCCCAGCGGTTCCGTGATCCGGAGGCCGCATTAT TGCGCTACAGCAAGGCGCTGGGGGGCATGAGCGCATTTCGGGCGCAGCGGCTGGGGAAAATGATTGGCCTGGACGAAGGA ACAATAGAATTACTGCGCAAAGGAAAAATGAGTGTAGAGGAATTACTTAAAAAGCAGAAAGAGCAGGGGGTAATAACAAA AGAGCAGGTCGCAATGACGGATAAATTCAATCAAGATTTGCGAACACTTAAAATGAGTTTTACTGATTTAAAAACTAATA TCGGAATGGGATTAATTCCAACATTTCAATATTTGCTCGATAAGTGGAACGCATTATCAAAATGGACATCTGAAAATAAA GATTTCGTGAAGGGATTCTTTATTGCTATTGCAGCTATCATTGTCGATTTCTATTTACCCGCAATGTTAAAAGCCGCAGC AGCAACGATAGCCGCAACGTGGCCTATTTTATTAATCGTTGCCGCCGTTGTTGCCGTTGCCGCTGCGTTCGCTTTGGCTT ATGACGACGTCATGAATTTTCTTGCGGGAAATGATTCAGTTATCGGTGAGCTATCAAAAAAATGGCCGTGGATCGGTGAA TTGGTGCTGGGCTTAGTCGCTGAATTGAAAAATCTCTGGGCGCAAATTGTTGCGGTTGGAGATGCGTTTATTTTAATGGT AACTAATCCTATTCAGTTTTTAAAAAACTTCGGCGCTGAAATTAGAGAATTACTGGATCTGCTATTCGGTGAGGGAGCTG GAGATAGTATTTTTAGCGCAATCGCTGATTCAGTCGGCGCGGCGTGGAAGGGGATAAAGATATTAATTACAAGTGTTGTC GGCTTAGCAATGAAAGGGTTTGAAGCTATAGGTAACGCGTGGAAAAAAGTAAAAGGCTGGTTCGGCGCGGGCGAAGAAGA AGTTAATAACGCAAAAAACGCGGCAGCAGGGCAATCACTGCAGGGCTGGGAGACTCCGGGGGACTTAACTTACGGCGGCA AGGAGCAACTGGCGCAGGCATCAGCAAGCAGCGTAACGACAATGACGAGCAGCAGCATTACTAACAGCAAAGCAGCGAAT AAAAATATTAATAATCGCGTCGATAAAATAGAAGTGATCACGCAGGCGACGGACGCGGAGGGGATCGCCCGTGACATCGG CAGTGAATATGGCAATGCAATGAGTCAGTACGCTGACGGGTTGGAAATATAA
Upstream 100 bases:
>100_bases ACGTCTACACACTAGAAGAGGCTTTTGATCTCTTCGAAATCATCGCAGTACAGCGCATGAATGAATCCCTCGCTATGGAA TACTCGCAAAGGAAAAAATA
Downstream 100 bases:
>100_bases TGAATGAAACAGAAATTTACGGTATCTATGACAGTGACTTTAACCTGATGTTTGAAAACGCCATTAATATGAAAGCCAGT GTTTTTGAAGGCTCTAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MNLLEAFYYTFAADASGLDRGLTDAEKKAEKLKNSVSSADAASEKLGASFLSLAKAGVALLGVTLTLGGIKALALGTAET TSELGKQARQMNVNVSTLDAWRKTITESGGDAEAFTRTLGNMAQRFRDPEAALLRYSKALGGMSAFRAQRLGKMIGLDEG TIELLRKGKMSVEELLKKQKEQGVITKEQVAMTDKFNQDLRTLKMSFTDLKTNIGMGLIPTFQYLLDKWNALSKWTSENK DFVKGFFIAIAAIIVDFYLPAMLKAAAATIAATWPILLIVAAVVAVAAAFALAYDDVMNFLAGNDSVIGELSKKWPWIGE LVLGLVAELKNLWAQIVAVGDAFILMVTNPIQFLKNFGAEIRELLDLLFGEGAGDSIFSAIADSVGAAWKGIKILITSVV GLAMKGFEAIGNAWKKVKGWFGAGEEEVNNAKNAAAGQSLQGWETPGDLTYGGKEQLAQASASSVTTMTSSSITNSKAAN KNINNRVDKIEVITQATDAEGIARDIGSEYGNAMSQYADGLEI
Sequences:
>Translated_523_residues MNLLEAFYYTFAADASGLDRGLTDAEKKAEKLKNSVSSADAASEKLGASFLSLAKAGVALLGVTLTLGGIKALALGTAET TSELGKQARQMNVNVSTLDAWRKTITESGGDAEAFTRTLGNMAQRFRDPEAALLRYSKALGGMSAFRAQRLGKMIGLDEG TIELLRKGKMSVEELLKKQKEQGVITKEQVAMTDKFNQDLRTLKMSFTDLKTNIGMGLIPTFQYLLDKWNALSKWTSENK DFVKGFFIAIAAIIVDFYLPAMLKAAAATIAATWPILLIVAAVVAVAAAFALAYDDVMNFLAGNDSVIGELSKKWPWIGE LVLGLVAELKNLWAQIVAVGDAFILMVTNPIQFLKNFGAEIRELLDLLFGEGAGDSIFSAIADSVGAAWKGIKILITSVV GLAMKGFEAIGNAWKKVKGWFGAGEEEVNNAKNAAAGQSLQGWETPGDLTYGGKEQLAQASASSVTTMTSSSITNSKAAN KNINNRVDKIEVITQATDAEGIARDIGSEYGNAMSQYADGLEI >Mature_523_residues MNLLEAFYYTFAADASGLDRGLTDAEKKAEKLKNSVSSADAASEKLGASFLSLAKAGVALLGVTLTLGGIKALALGTAET TSELGKQARQMNVNVSTLDAWRKTITESGGDAEAFTRTLGNMAQRFRDPEAALLRYSKALGGMSAFRAQRLGKMIGLDEG TIELLRKGKMSVEELLKKQKEQGVITKEQVAMTDKFNQDLRTLKMSFTDLKTNIGMGLIPTFQYLLDKWNALSKWTSENK DFVKGFFIAIAAIIVDFYLPAMLKAAAATIAATWPILLIVAAVVAVAAAFALAYDDVMNFLAGNDSVIGELSKKWPWIGE LVLGLVAELKNLWAQIVAVGDAFILMVTNPIQFLKNFGAEIRELLDLLFGEGAGDSIFSAIADSVGAAWKGIKILITSVV GLAMKGFEAIGNAWKKVKGWFGAGEEEVNNAKNAAAGQSLQGWETPGDLTYGGKEQLAQASASSVTTMTSSSITNSKAAN KNINNRVDKIEVITQATDAEGIARDIGSEYGNAMSQYADGLEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55926; Mature: 55926
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLEAFYYTFAADASGLDRGLTDAEKKAEKLKNSVSSADAASEKLGASFLSLAKAGVAL CCHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVTLTLGGIKALALGTAETTSELGKQARQMNVNVSTLDAWRKTITESGGDAEAFTRTLG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHH NMAQRFRDPEAALLRYSKALGGMSAFRAQRLGKMIGLDEGTIELLRKGKMSVEELLKKQK HHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH EQGVITKEQVAMTDKFNQDLRTLKMSFTDLKTNIGMGLIPTFQYLLDKWNALSKWTSENK HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCH DFVKGFFIAIAAIIVDFYLPAMLKAAAATIAATWPILLIVAAVVAVAAAFALAYDDVMNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGNDSVIGELSKKWPWIGELVLGLVAELKNLWAQIVAVGDAFILMVTNPIQFLKNFGAE HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCHHHHHHHHCHH IRELLDLLFGEGAGDSIFSAIADSVGAAWKGIKILITSVVGLAMKGFEAIGNAWKKVKGW HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGAGEEEVNNAKNAAAGQSLQGWETPGDLTYGGKEQLAQASASSVTTMTSSSITNSKAAN CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHC KNINNRVDKIEVITQATDAEGIARDIGSEYGNAMSQYADGLEI CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNLLEAFYYTFAADASGLDRGLTDAEKKAEKLKNSVSSADAASEKLGASFLSLAKAGVAL CCHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVTLTLGGIKALALGTAETTSELGKQARQMNVNVSTLDAWRKTITESGGDAEAFTRTLG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHH NMAQRFRDPEAALLRYSKALGGMSAFRAQRLGKMIGLDEGTIELLRKGKMSVEELLKKQK HHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH EQGVITKEQVAMTDKFNQDLRTLKMSFTDLKTNIGMGLIPTFQYLLDKWNALSKWTSENK HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCH DFVKGFFIAIAAIIVDFYLPAMLKAAAATIAATWPILLIVAAVVAVAAAFALAYDDVMNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGNDSVIGELSKKWPWIGELVLGLVAELKNLWAQIVAVGDAFILMVTNPIQFLKNFGAE HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCHHHHHHHHCHH IRELLDLLFGEGAGDSIFSAIADSVGAAWKGIKILITSVVGLAMKGFEAIGNAWKKVKGW HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGAGEEEVNNAKNAAAGQSLQGWETPGDLTYGGKEQLAQASASSVTTMTSSSITNSKAAN CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHC KNINNRVDKIEVITQATDAEGIARDIGSEYGNAMSQYADGLEI CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA