Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is 170023483

Identifier: 170023483

GI number: 170023483

Start: 1363470

End: 1363979

Strand: Direct

Name: 170023483

Synonym: YPK_1237

Alternate gene names: NA

Gene position: 1363470-1363979 (Clockwise)

Preceding gene: 170023482

Following gene: 170023484

Centisome position: 29.08

GC content: 39.02

Gene sequence:

>510_bases
ATGAATGAAACAGAAATTTACGGTATCTATGACAGTGACTTTAACCTGATGTTTGAAAACGCCATTAATATGAAAGCCAG
TGTTTTTGAAGGCTCTAAACTAATGGAACACCCCATTGAAGACGGCTCGACTAAAACTGACCACAAAATAATTCTGCCTG
TTGAGATAGAAGTTATATTATGGATATCGGAAGCGCATTATAAAGACACGTACTCTGTAATTAAACAGGCTTTGTATAGT
GACTCCAGCTTTCAAGTTAATACTCGCGTTGGAATTTATTCCAATATGATTTTATCTGAGATGCCGCACGAGGAATCACC
CGATCAATCCGGTGCTATTATCATTACGTTGAGTTTGAAAGAAGCTGTTATTGTTACCACGCAATACCAGGCGTTAACGT
CAAGAAAGGTTAAAGACTCGAAAGATACCAGCACTGTAAATCGCGGGGAGCAAAAACCGGTGAAGAATTCTGTTGCCATT
GGTGTGGTGTGGGATTTACTTGGAAAATAA

Upstream 100 bases:

>100_bases
AAGTGATCACGCAGGCGACGGACGCGGAGGGGATCGCCCGTGACATCGGCAGTGAATATGGCAATGCAATGAGTCAGTAC
GCTGACGGGTTGGAAATATA

Downstream 100 bases:

>100_bases
CATGACTCAGTTAATTATTTTGGAATCAGTAGCAAACCAATCATTAACTATTCGACTTGAAAACTCACGTTATGAAATAG
TCTTGAATACGTTAAATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Related-Protein

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MNETEIYGIYDSDFNLMFENAINMKASVFEGSKLMEHPIEDGSTKTDHKIILPVEIEVILWISEAHYKDTYSVIKQALYS
DSSFQVNTRVGIYSNMILSEMPHEESPDQSGAIIITLSLKEAVIVTTQYQALTSRKVKDSKDTSTVNRGEQKPVKNSVAI
GVVWDLLGK

Sequences:

>Translated_169_residues
MNETEIYGIYDSDFNLMFENAINMKASVFEGSKLMEHPIEDGSTKTDHKIILPVEIEVILWISEAHYKDTYSVIKQALYS
DSSFQVNTRVGIYSNMILSEMPHEESPDQSGAIIITLSLKEAVIVTTQYQALTSRKVKDSKDTSTVNRGEQKPVKNSVAI
GVVWDLLGK
>Mature_169_residues
MNETEIYGIYDSDFNLMFENAINMKASVFEGSKLMEHPIEDGSTKTDHKIILPVEIEVILWISEAHYKDTYSVIKQALYS
DSSFQVNTRVGIYSNMILSEMPHEESPDQSGAIIITLSLKEAVIVTTQYQALTSRKVKDSKDTSTVNRGEQKPVKNSVAI
GVVWDLLGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18979; Mature: 18979

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETEIYGIYDSDFNLMFENAINMKASVFEGSKLMEHPIEDGSTKTDHKIILPVEIEVIL
CCCCEEEEEECCCCEEEEECCCCCEEEEECCCHHHHCCCCCCCCCCCCEEEEEEEEEEEE
WISEAHYKDTYSVIKQALYSDSSFQVNTRVGIYSNMILSEMPHEESPDQSGAIIITLSLK
EEECCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCCEEEEEEECC
EAVIVTTQYQALTSRKVKDSKDTSTVNRGEQKPVKNSVAIGVVWDLLGK
CEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCC
>Mature Secondary Structure
MNETEIYGIYDSDFNLMFENAINMKASVFEGSKLMEHPIEDGSTKTDHKIILPVEIEVIL
CCCCEEEEEECCCCEEEEECCCCCEEEEECCCHHHHCCCCCCCCCCCCEEEEEEEEEEEE
WISEAHYKDTYSVIKQALYSDSSFQVNTRVGIYSNMILSEMPHEESPDQSGAIIITLSLK
EEECCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCCEEEEEEECC
EAVIVTTQYQALTSRKVKDSKDTSTVNRGEQKPVKNSVAIGVVWDLLGK
CEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA