| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023472
Identifier: 170023472
GI number: 170023472
Start: 1355464
End: 1355955
Strand: Direct
Name: 170023472
Synonym: YPK_1226
Alternate gene names: NA
Gene position: 1355464-1355955 (Clockwise)
Preceding gene: 170023471
Following gene: 170023473
Centisome position: 28.9
GC content: 54.47
Gene sequence:
>492_bases ATGAATTTTCAAAAAACGGTCCGCTTTGATCAAGCGTTCGGCTTAGTCGGTGAAGTGTCATTTGATGGCCCACTTCGCGC AAAACCGGGCGTACTTAACAGCGAAAATCCGGCCAATAACGTGTTTGGCCGCGCCTTTACTGTGCTGTCCGATGGCTCGA TCACGGCAGGCGGGACCGGGGCATTCTGGGGCATTCTCGCCAACCCCAAGGCCCACATGTTCACAAGCCGAATTGGCGAC GACGGCAATAACACGTTACCAAACGGCGTTAATGCTGAGTTTGCCGATATGGCGATTATTAACGTTGAAGTATCAATGCC AACGACGGTGGGTAGTGACCTGTTTTACGTCATAGCTACCGGTGCGTTATTGGCCCTGCCGTCAGGTACCGCCGCGCCGG AGGGATATCTTGCAGTACCTAACGCCAAAGTAGCCCGACTCCCGCAGACGAGCGCCACGGGCGGTCTTATCGTCGCGCAA CTGACCAATTAA
Upstream 100 bases:
>100_bases CAGCCAAAGCCGCCCCCGTGACTACGTATAGCGGTACCGGCCTAGACGCCATCGATAGCGGCAGTGCGATTTCTAAATAT CTGACAGGAGATGAAAAATA
Downstream 100 bases:
>100_bases TAAAGGACGAAAAATGAAACAATCAGTTACTCACAGTTCACTTGCACCGCGCAATGTCCGCCCGTTATCGCTGACAGCAA AAGACATCACTGGCAACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MNFQKTVRFDQAFGLVGEVSFDGPLRAKPGVLNSENPANNVFGRAFTVLSDGSITAGGTGAFWGILANPKAHMFTSRIGD DGNNTLPNGVNAEFADMAIINVEVSMPTTVGSDLFYVIATGALLALPSGTAAPEGYLAVPNAKVARLPQTSATGGLIVAQ LTN
Sequences:
>Translated_163_residues MNFQKTVRFDQAFGLVGEVSFDGPLRAKPGVLNSENPANNVFGRAFTVLSDGSITAGGTGAFWGILANPKAHMFTSRIGD DGNNTLPNGVNAEFADMAIINVEVSMPTTVGSDLFYVIATGALLALPSGTAAPEGYLAVPNAKVARLPQTSATGGLIVAQ LTN >Mature_163_residues MNFQKTVRFDQAFGLVGEVSFDGPLRAKPGVLNSENPANNVFGRAFTVLSDGSITAGGTGAFWGILANPKAHMFTSRIGD DGNNTLPNGVNAEFADMAIINVEVSMPTTVGSDLFYVIATGALLALPSGTAAPEGYLAVPNAKVARLPQTSATGGLIVAQ LTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16815; Mature: 16815
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFQKTVRFDQAFGLVGEVSFDGPLRAKPGVLNSENPANNVFGRAFTVLSDGSITAGGTG CCCCHHEEEHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCC AFWGILANPKAHMFTSRIGDDGNNTLPNGVNAEFADMAIINVEVSMPTTVGSDLFYVIAT EEEEEEECCHHHEEEHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEC GALLALPSGTAAPEGYLAVPNAKVARLPQTSATGGLIVAQLTN CEEEECCCCCCCCCCEEECCCCCEEECCCCCCCCCEEEEEECC >Mature Secondary Structure MNFQKTVRFDQAFGLVGEVSFDGPLRAKPGVLNSENPANNVFGRAFTVLSDGSITAGGTG CCCCHHEEEHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCC AFWGILANPKAHMFTSRIGDDGNNTLPNGVNAEFADMAIINVEVSMPTTVGSDLFYVIAT EEEEEEECCHHHEEEHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEC GALLALPSGTAAPEGYLAVPNAKVARLPQTSATGGLIVAQLTN CEEEECCCCCCCCCCEEECCCCCEEECCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA