| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023471
Identifier: 170023471
GI number: 170023471
Start: 1354316
End: 1355464
Strand: Direct
Name: 170023471
Synonym: YPK_1225
Alternate gene names: NA
Gene position: 1354316-1355464 (Clockwise)
Preceding gene: 170023470
Following gene: 170023472
Centisome position: 28.88
GC content: 50.22
Gene sequence:
>1149_bases ATGAGTGAACGCTCAATTGATACAAACGGCTGGTTTGAATCCCCGAACAACCCATTAAGCAAAGTCGGTATTTATGCCTA CCTCGGCAAAAACATTCCCGGCGCACCTGACCCCGGCAAGATTTATTACGTATACCGCCCGGAGGATGAGCTATCAGATC CCGCGTGTATCGACTCGTTCAAATTGCTGCCGTGGACGGACGACCACCCGCCCGGCTTGTTGGGTGAAGAGGACGAAGGG TTAACACCCGCAGAAGAGAAAGGCGTACAGGGCGTGATCGGCGAGCGTGTCTATTACGAGGACGGCGTTCTGTACGGGAA TATCAAAGTTTTTTCACAAACGATGGATGAGCTGATACGCAAAGGCAAAAAAGAATTGTCGTGCGGCTACCGCTCTAAAT ATGAATGGCAATCGGGTACGTACAACGGTGACCAATACGACGTTATCCAGCGACAAATTAGAGGTAATCATTTGTCGTTG GTAGACGAGGGGCGCATGGGTTCAGAAGTCGCTGTACTCGACGCGTTTACACTTGACTCAAAGGATGTAATTCACATGAC CGAAGAAGAAAAAAAAGCACTGGCAGCATTGCTGGCCATGTTACCTGCACTGCAAAAAATCGTTGATGCGGCGGGTACGG CAGACAACGAAGAAGAAACAAAAGACAGCGAAGAGGAGGAAGGCACTAAGGACAGTGAAGAGCCGGAAGAAGGTACCAAA GATAGCGAAGAAGAAGGCACCGCTGACGAAGAGGATAAAGATAAGGATAAAGAGGGTACCGCCGACGAGGACGACAAAGA CAAAGAGACCGCCGCTGCGCTGGATGCGATGGACAAAGAAATTAAAGCACTAAAACGGGATAGCTTCAAAAACGTGATGC GTGAAGTGTCGCGCCGTGATGCGCTGGCGCGTGATTTGTCGCGCCACGTCGGCACTTTCGATCACGCAGACATGACCACT AATGAAGTTGCTGCGTACGGTGTTAAAAAGCTGAAAATCACCCACGAAAAGGGGCAGGAACTCTCTTGTTTGTCCGGGTA TTTACAGGCAGCCAAAGCCGCCCCCGTGACTACGTATAGCGGTACCGGCCTAGACGCCATCGATAGCGGCAGTGCGATTT CTAAATATCTGACAGGAGATGAAAAATAA
Upstream 100 bases:
>100_bases CCCCCTATTATTGACAAACGAACTGGCGAGCGCGGGACTCCTGGGCAGTTGCCTTATTGCCGATGTACCAAACGGCCAAT AATTGATTTTGGTGATGACG
Downstream 100 bases:
>100_bases TGAATTTTCAAAAAACGGTCCGCTTTGATCAAGCGTTCGGCTTAGTCGGTGAAGTGTCATTTGATGGCCCACTTCGCGCA AAACCGGGCGTACTTAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MSERSIDTNGWFESPNNPLSKVGIYAYLGKNIPGAPDPGKIYYVYRPEDELSDPACIDSFKLLPWTDDHPPGLLGEEDEG LTPAEEKGVQGVIGERVYYEDGVLYGNIKVFSQTMDELIRKGKKELSCGYRSKYEWQSGTYNGDQYDVIQRQIRGNHLSL VDEGRMGSEVAVLDAFTLDSKDVIHMTEEEKKALAALLAMLPALQKIVDAAGTADNEEETKDSEEEEGTKDSEEPEEGTK DSEEEGTADEEDKDKDKEGTADEDDKDKETAAALDAMDKEIKALKRDSFKNVMREVSRRDALARDLSRHVGTFDHADMTT NEVAAYGVKKLKITHEKGQELSCLSGYLQAAKAAPVTTYSGTGLDAIDSGSAISKYLTGDEK
Sequences:
>Translated_382_residues MSERSIDTNGWFESPNNPLSKVGIYAYLGKNIPGAPDPGKIYYVYRPEDELSDPACIDSFKLLPWTDDHPPGLLGEEDEG LTPAEEKGVQGVIGERVYYEDGVLYGNIKVFSQTMDELIRKGKKELSCGYRSKYEWQSGTYNGDQYDVIQRQIRGNHLSL VDEGRMGSEVAVLDAFTLDSKDVIHMTEEEKKALAALLAMLPALQKIVDAAGTADNEEETKDSEEEEGTKDSEEPEEGTK DSEEEGTADEEDKDKDKEGTADEDDKDKETAAALDAMDKEIKALKRDSFKNVMREVSRRDALARDLSRHVGTFDHADMTT NEVAAYGVKKLKITHEKGQELSCLSGYLQAAKAAPVTTYSGTGLDAIDSGSAISKYLTGDEK >Mature_381_residues SERSIDTNGWFESPNNPLSKVGIYAYLGKNIPGAPDPGKIYYVYRPEDELSDPACIDSFKLLPWTDDHPPGLLGEEDEGL TPAEEKGVQGVIGERVYYEDGVLYGNIKVFSQTMDELIRKGKKELSCGYRSKYEWQSGTYNGDQYDVIQRQIRGNHLSLV DEGRMGSEVAVLDAFTLDSKDVIHMTEEEKKALAALLAMLPALQKIVDAAGTADNEEETKDSEEEEGTKDSEEPEEGTKD SEEEGTADEEDKDKDKEGTADEDDKDKETAAALDAMDKEIKALKRDSFKNVMREVSRRDALARDLSRHVGTFDHADMTTN EVAAYGVKKLKITHEKGQELSCLSGYLQAAKAAPVTTYSGTGLDAIDSGSAISKYLTGDEK
Specific function: Unknown
COG id: COG3566
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42140; Mature: 42009
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERSIDTNGWFESPNNPLSKVGIYAYLGKNIPGAPDPGKIYYVYRPEDELSDPACIDSF CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCC KLLPWTDDHPPGLLGEEDEGLTPAEEKGVQGVIGERVYYEDGVLYGNIKVFSQTMDELIR CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHCCEEEECCCEEEEHHHHHHHHHHHHHH KGKKELSCGYRSKYEWQSGTYNGDQYDVIQRQIRGNHLSLVDEGRMGSEVAVLDAFTLDS HCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECCC KDVIHMTEEEKKALAALLAMLPALQKIVDAAGTADNEEETKDSEEEEGTKDSEEPEEGTK CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCCCCCCCCCCCCC DSEEEGTADEEDKDKDKEGTADEDDKDKETAAALDAMDKEIKALKRDSFKNVMREVSRRD CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALARDLSRHVGTFDHADMTTNEVAAYGVKKLKITHEKGQELSCLSGYLQAAKAAPVTTYS HHHHHHHHHCCCCCCCCCCHHHHHHHCHHHEEEECCCCCHHHHHHHHHHHHHCCCCEEEC GTGLDAIDSGSAISKYLTGDEK CCCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure SERSIDTNGWFESPNNPLSKVGIYAYLGKNIPGAPDPGKIYYVYRPEDELSDPACIDSF CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCC KLLPWTDDHPPGLLGEEDEGLTPAEEKGVQGVIGERVYYEDGVLYGNIKVFSQTMDELIR CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHCCEEEECCCEEEEHHHHHHHHHHHHHH KGKKELSCGYRSKYEWQSGTYNGDQYDVIQRQIRGNHLSLVDEGRMGSEVAVLDAFTLDS HCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECCC KDVIHMTEEEKKALAALLAMLPALQKIVDAAGTADNEEETKDSEEEEGTKDSEEPEEGTK CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCCCCCCCCCCCCC DSEEEGTADEEDKDKDKEGTADEDDKDKETAAALDAMDKEIKALKRDSFKNVMREVSRRD CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALARDLSRHVGTFDHADMTTNEVAAYGVKKLKITHEKGQELSCLSGYLQAAKAAPVTTYS HHHHHHHHHCCCCCCCCCCHHHHHHHCHHHEEEECCCCCHHHHHHHHHHHHHCCCCEEEC GTGLDAIDSGSAISKYLTGDEK CCCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA