| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023154
Identifier: 170023154
GI number: 170023154
Start: 1026231
End: 1026683
Strand: Direct
Name: 170023154
Synonym: YPK_0905
Alternate gene names: NA
Gene position: 1026231-1026683 (Clockwise)
Preceding gene: 170023153
Following gene: 170023155
Centisome position: 21.88
GC content: 51.66
Gene sequence:
>453_bases ATGAGTCGTATTTCTGGTCAATCGGTTGATGTGAACATGGACGGTGACCTGATCCACGTTGAAAAGATTGGGCTGACAAT TTCCGATAACAGCGGCCCGGCACAGACCAACGGTGTGCCGGATGGCGACGTGAAAGGTGATGTGGGTGGCGAAGGGGATA TTGAAGTCAGTACCAAAGTGTTGCAGCAACTGACCGCTAAAGCTTCCCGTTCGGGTTCGTGGCGCGGTATCCCGGCGTTT GACATCCTGTTCTACGCCAAAACCGGGGAAGAGGAGTTAAAGGTGGAAGTGTTCGGCGTGAAATTGAAATTTGATTCAGT GCTGGATGTTGACCCGAAAGGCGGGGCGGTACTGACCCACAAAATTAAGTATTTCATTACCAGCCCGGATTTTGTGCGCA TTAACGGCATTCCGTATCTGGAAGAAGACGCCACGCGCAATCTGATCGGCTAG
Upstream 100 bases:
>100_bases CCGCCACCAAAGTGGAGATTTATATCGTGGTTCGTCCGTATGAATGCCCGAAAAGTATCACCGTCAGTTTGATGTTGGAT ACCGCACTGGAGGATAGCCA
Downstream 100 bases:
>100_bases GGGGCAAGGATGCAGGAACATGAAAAAACTTTTCTCGGACTGGCCATTTTAGGTGGGCTGATTGCACTGGGAAAGGTATT GGCCAGTGATGAGCCAATCA
Product: putative phage gene
Products: NA
Alternate protein names: Phage Protein; Phage Gene; Tail Tube; Tail Tube Protein; Tail Tube Protein Bacteriophage Origin; Phage Tail Tube Protein
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSRISGQSVDVNMDGDLIHVEKIGLTISDNSGPAQTNGVPDGDVKGDVGGEGDIEVSTKVLQQLTAKASRSGSWRGIPAF DILFYAKTGEEELKVEVFGVKLKFDSVLDVDPKGGAVLTHKIKYFITSPDFVRINGIPYLEEDATRNLIG
Sequences:
>Translated_150_residues MSRISGQSVDVNMDGDLIHVEKIGLTISDNSGPAQTNGVPDGDVKGDVGGEGDIEVSTKVLQQLTAKASRSGSWRGIPAF DILFYAKTGEEELKVEVFGVKLKFDSVLDVDPKGGAVLTHKIKYFITSPDFVRINGIPYLEEDATRNLIG >Mature_149_residues SRISGQSVDVNMDGDLIHVEKIGLTISDNSGPAQTNGVPDGDVKGDVGGEGDIEVSTKVLQQLTAKASRSGSWRGIPAFD ILFYAKTGEEELKVEVFGVKLKFDSVLDVDPKGGAVLTHKIKYFITSPDFVRINGIPYLEEDATRNLIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16124; Mature: 15993
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRISGQSVDVNMDGDLIHVEKIGLTISDNSGPAQTNGVPDGDVKGDVGGEGDIEVSTKV CCCCCCCEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHH LQQLTAKASRSGSWRGIPAFDILFYAKTGEEELKVEVFGVKLKFDSVLDVDPKGGAVLTH HHHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEECCEEEECCCCCEEEEE KIKYFITSPDFVRINGIPYLEEDATRNLIG EEEEEECCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure SRISGQSVDVNMDGDLIHVEKIGLTISDNSGPAQTNGVPDGDVKGDVGGEGDIEVSTKV CCCCCCEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHH LQQLTAKASRSGSWRGIPAFDILFYAKTGEEELKVEVFGVKLKFDSVLDVDPKGGAVLTH HHHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEEEECCEEEECCCCCEEEEE KIKYFITSPDFVRINGIPYLEEDATRNLIG EEEEEECCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA