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The map label for this gene is 170023149

Identifier: 170023149

GI number: 170023149

Start: 1022663

End: 1023361

Strand: Direct

Name: 170023149

Synonym: YPK_0900

Alternate gene names: NA

Gene position: 1022663-1023361 (Clockwise)

Preceding gene: 170023148

Following gene: 170023150

Centisome position: 21.81

GC content: 55.08

Gene sequence:

>699_bases
ATGGCTTTATCACCGGCCCAGCGTCATACGGCCATGATTGAGGCGCAGCGTAAGCTAAACAATCATGAGGCACTGGTCGG
AGTGGCCAGTATGCACCTGCAAAAGATGGCTATCGATAATGATGCTCAACGGCTGCACGGGCTGACAATGGCTGAGAAAG
TGCAGTTGAAACGCCGGGAACTGCTGCCCCGCTGGTTACCCAGCGTGGAAACCTATCTGGCGGCAGGCGAAGTCTACAGC
AATCCGGTATTCACCTACTGCATTGCCTGGCTGTTTGATGTTGGGGACTTTGATCTGGCGCTTGACTGGGCAGACATCGC
CATAGAGCAGCGGCAGATAACGCCTTTTGGCAAGCGGCGCAGTATTTCTCACTTTGTCGCCGATAGCATGTTGGCGTGGT
CTGAGGCCAGCACGGACGCGGGCCAGAGTATTGAACCGTATTTCTTGCGGGTATTCGACAACGTGCGTGATAACTGGCGT
ATTCCGGAGCAGGCCAGCGCCAAATGGTTCAAGTTTGCCGGGCTGATGCTGCTGCGTAATGACAACGGGGAGCCGTTGCC
CAGTGCCATAGAGGATGTGGCCACGTTGCAACAGGCTGATGCACTACTGGCGCAGGCTAATACCTTCCATCCGGGGTGTG
GTGTCAAAACACATCGGCAACGGATTGCCGCCCGATTACGGATGCTAGAAAAAGAATAA

Upstream 100 bases:

>100_bases
GAGTACCCAGAGTTGTACGCCGCTATTGATGAATCCGCCGTAACCATCGGTGAAATCAAAGAGCCAAGTGATCCGAAAGT
AGGCGAGTAAGGGGGCAATC

Downstream 100 bases:

>100_bases
TAACAACTACCGAGAGCCAAAGCGGGCGCGGTGGAGGCTGCAACATTCGTTCGCAGGCCGTGGAAACCGGTCTGCCCGCT
TTTTTCGGGAGCTGTATGTT

Product: small terminase subunit

Products: NA

Alternate protein names: Phage Terminase Subunit; Phage Small Terminase Subunit; Terminase Endonuclease Subunit; Phage Terminase Endonuclease Subunit; Terminase Endonuclease Subunit Bacteriophage Origin; Phage Gene

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MALSPAQRHTAMIEAQRKLNNHEALVGVASMHLQKMAIDNDAQRLHGLTMAEKVQLKRRELLPRWLPSVETYLAAGEVYS
NPVFTYCIAWLFDVGDFDLALDWADIAIEQRQITPFGKRRSISHFVADSMLAWSEASTDAGQSIEPYFLRVFDNVRDNWR
IPEQASAKWFKFAGLMLLRNDNGEPLPSAIEDVATLQQADALLAQANTFHPGCGVKTHRQRIAARLRMLEKE

Sequences:

>Translated_232_residues
MALSPAQRHTAMIEAQRKLNNHEALVGVASMHLQKMAIDNDAQRLHGLTMAEKVQLKRRELLPRWLPSVETYLAAGEVYS
NPVFTYCIAWLFDVGDFDLALDWADIAIEQRQITPFGKRRSISHFVADSMLAWSEASTDAGQSIEPYFLRVFDNVRDNWR
IPEQASAKWFKFAGLMLLRNDNGEPLPSAIEDVATLQQADALLAQANTFHPGCGVKTHRQRIAARLRMLEKE
>Mature_231_residues
ALSPAQRHTAMIEAQRKLNNHEALVGVASMHLQKMAIDNDAQRLHGLTMAEKVQLKRRELLPRWLPSVETYLAAGEVYSN
PVFTYCIAWLFDVGDFDLALDWADIAIEQRQITPFGKRRSISHFVADSMLAWSEASTDAGQSIEPYFLRVFDNVRDNWRI
PEQASAKWFKFAGLMLLRNDNGEPLPSAIEDVATLQQADALLAQANTFHPGCGVKTHRQRIAARLRMLEKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26288; Mature: 26157

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSPAQRHTAMIEAQRKLNNHEALVGVASMHLQKMAIDNDAQRLHGLTMAEKVQLKRRE
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LLPRWLPSVETYLAAGEVYSNPVFTYCIAWLFDVGDFDLALDWADIAIEQRQITPFGKRR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCHH
SISHFVADSMLAWSEASTDAGQSIEPYFLRVFDNVRDNWRIPEQASAKWFKFAGLMLLRN
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCEEEEEC
DNGEPLPSAIEDVATLQQADALLAQANTFHPGCGVKTHRQRIAARLRMLEKE
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALSPAQRHTAMIEAQRKLNNHEALVGVASMHLQKMAIDNDAQRLHGLTMAEKVQLKRRE
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LLPRWLPSVETYLAAGEVYSNPVFTYCIAWLFDVGDFDLALDWADIAIEQRQITPFGKRR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCHH
SISHFVADSMLAWSEASTDAGQSIEPYFLRVFDNVRDNWRIPEQASAKWFKFAGLMLLRN
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCEEEEEC
DNGEPLPSAIEDVATLQQADALLAQANTFHPGCGVKTHRQRIAARLRMLEKE
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA