Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is 170023150

Identifier: 170023150

GI number: 170023150

Start: 1023457

End: 1023909

Strand: Direct

Name: 170023150

Synonym: YPK_0901

Alternate gene names: NA

Gene position: 1023457-1023909 (Clockwise)

Preceding gene: 170023149

Following gene: 170023151

Centisome position: 21.82

GC content: 55.63

Gene sequence:

>453_bases
ATGTTTAACGGAAAAGAAATTGATTATCAGGATGTTGAGCTGACCAATGACGGATTTTGGCCAGACCTCAATTTAAGCGA
GTTTCAGCGTAACCGCAGTATTCCGGCGGATATTGATGCCGATACGCAAGCCGATGCGTTGCTGGCCAGCGTGGCCGAAG
TGAATTTAGACCTGCGCCCGTTAGCTGCGGGATACGTGGCCAAGGGGTACCAACAGGCCGCAGCGGTGCCGGGCGTGGCG
ATGAACGGGCAAACGGCACTGATTAGCCAGTATAAAAAGGCCGTCTTTGCCCGTGCCAAAGCCGATTTACTGGGGGAGTA
TTCGACGCAGTTTAGCCGGGTACCCAATGCCGGGCAGGAAAACCCCGAAACCCGCAGCCGCCTGCTGGCAGAGGCCAGCA
CAGTATTGCGCAATATGAAAGGTGTGGGCCGCTGCACCGTGAGGCAGATATGA

Upstream 100 bases:

>100_bases
AATAATAACAACTACCGAGAGCCAAAGCGGGCGCGGTGGAGGCTGCAACATTCGTTCGCAGGCCGTGGAAACCGGTCTGC
CCGCTTTTTTCGGGAGCTGT

Downstream 100 bases:

>100_bases
GCAAATTACACTCATTAACCGCCTTTGTGCAGGACAATTTACCGCAGCGGCTGCGTAAGCTGGAATTTAACAGCGACATG
GACGCGCTGCGCTTTATTCC

Product: head completion protein

Products: NA

Alternate protein names: Head Completion Protein; Head Completion/Stabilization Protein; Phage Head Completeion Protein; Head Completion/Stabilization Protein Bacteriophage Origin; Prophage; Phage Gene; Phage Head Completion

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MFNGKEIDYQDVELTNDGFWPDLNLSEFQRNRSIPADIDADTQADALLASVAEVNLDLRPLAAGYVAKGYQQAAAVPGVA
MNGQTALISQYKKAVFARAKADLLGEYSTQFSRVPNAGQENPETRSRLLAEASTVLRNMKGVGRCTVRQI

Sequences:

>Translated_150_residues
MFNGKEIDYQDVELTNDGFWPDLNLSEFQRNRSIPADIDADTQADALLASVAEVNLDLRPLAAGYVAKGYQQAAAVPGVA
MNGQTALISQYKKAVFARAKADLLGEYSTQFSRVPNAGQENPETRSRLLAEASTVLRNMKGVGRCTVRQI
>Mature_150_residues
MFNGKEIDYQDVELTNDGFWPDLNLSEFQRNRSIPADIDADTQADALLASVAEVNLDLRPLAAGYVAKGYQQAAAVPGVA
MNGQTALISQYKKAVFARAKADLLGEYSTQFSRVPNAGQENPETRSRLLAEASTVLRNMKGVGRCTVRQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16367; Mature: 16367

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNGKEIDYQDVELTNDGFWPDLNLSEFQRNRSIPADIDADTQADALLASVAEVNLDLRP
CCCCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH
LAAGYVAKGYQQAAAVPGVAMNGQTALISQYKKAVFARAKADLLGEYSTQFSRVPNAGQE
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NPETRSRLLAEASTVLRNMKGVGRCTVRQI
CHHHHHHHHHHHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure
MFNGKEIDYQDVELTNDGFWPDLNLSEFQRNRSIPADIDADTQADALLASVAEVNLDLRP
CCCCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH
LAAGYVAKGYQQAAAVPGVAMNGQTALISQYKKAVFARAKADLLGEYSTQFSRVPNAGQE
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NPETRSRLLAEASTVLRNMKGVGRCTVRQI
CHHHHHHHHHHHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA