| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023146
Identifier: 170023146
GI number: 170023146
Start: 1018758
End: 1020545
Strand: Reverse
Name: 170023146
Synonym: YPK_0897
Alternate gene names: NA
Gene position: 1020545-1018758 (Counterclockwise)
Preceding gene: 170023175
Following gene: 170023145
Centisome position: 21.76
GC content: 51.85
Gene sequence:
>1788_bases ATGGCTAAACACTCTCAAACCATTATCGGTGTGGCGCGTTCACTTTATTTACATCGGTGGACACCGAAAGAAATCGCCAA TGAATTAAATCTGCCTAATGCGCGGATTATTTACTATTGGGCACAAAAATGGCATTGGGCTGATATGCTCAGTCATGAAA GTATTGAGGAGGCAATCAACCGCCGTATATTGGTGCTGGCCAATCGCGATAATAAAAACGAGCTGGAATTAAAAGAGATA GACAGCTTAATCGCCCAGCACTGCAAATTAATGGCGCAGAAGAGTAAACACACGGAAAAACTGGCGGCGATTAAAGCGCA GACACAAGGCAGCTATGCCAGCGGTGAAGAAGCTGCCGCGCGGGATGATAATGGCGGCGGGAAACGTAAATACCGCAAAA ATGATATTTCAGGCATTCAACAGGAAGAACTGGAACTGTTTGCCGGGGAAACGCTGTTTTTCTATCAGCAATACCTGCGG GCCAATAAACACCACGCTATCCGCAATATCCTGAAAAGCCGCCAGATTGGGGCGACGTGGTATTTCGCCTTTGAAGCACT GGAAGACGCGATTATGAGCGGCGATCCGCAAATATTCCTGTCTGCCTCCCGTGCGCAGGCCGAAGTATTCCGCTCGTATA TCGTTAATATCGCGCAGCAGTTCTTTGGGGTAACACTGACCGGCAACCCAATACGCCTCAGTAACGGCGCGGAGCTGCGT TTCCTGTCTACCAACAAGAACACCGCCCAATCCTACAGCGGCCACCTGTATTGCGATGAATATTTGTGGGTACCGAATTT CGCCAAATTAAATGAAGTGGCCAGTGCCATGGCCACCCATGATAAATGGCGCACCACCTATTTCTCCACACCCAGCGCCA AGACCCATCAGGGTTATCCGTTCTGGACGGGTGAAGAGTGGAAGCAAGGCGACAAACAGCGCAGCAAAATCACCTTCCCT GAGTTCGACGAGTACCGCGACGGCGGGCGGCTCTGCCCCGATGGCCAGTGGCGCTATGTCATTACCCTAGAGGACGCGAT AGACGGCGGCTTTAATCTGGCCGATATCGAGCGTCTGCGCAATAAGTACAACCGCGACACCTTTAACATGCTCTATATGT GTGTGTTTGTGGACAGCGGCGACAGCGTATTTAAATTTCATATGCTGGAAAAATGCGGCGTCGATATCGAGATGTGGCAA GACCATGATTTCAGTGCGCCACGGCCATTCGGCAACCGTGAGGTGTGGGGCGGCTTTGACCCGGCCCGCAGCGGTGACAC CTCAACCTTTGCCATTATTGCCCCGCCGCAGTTTGAGGGGGAGCGCTTCCGGGTGCTGGTCACGTTCTACTGGCAGGGGC TGAACTTTAACTATCAGGCCAACCAGATAAAAGAACTGTTTCAGCGCTACAACATGACCTACATCGGCGTAGATATCACC GGGATCGGCAACGGTGTGTTTGAACTGGTACAGAACTTTGCCATGCGCCAAGCGGTGGCCATCCACTACGGGCTGGAAAG TAAGAACCGGCTGGTCATGAAAATGATAGATGTGATCGAAAGCCAGCGCATTGAATGGGACGCCGAAGCCAAAGAGATCC CGGCGTCATTTCTGGCCATCCGTCGCACCAGTACCGCCAAGGGCGGCGGCATGACCTTTGTTGCAGACCGTACCAAAGAA ACTGGCCACGCCGATGTATTTTTCGCCATTGCCCACGCAATAGATAATGAACCGCTCAACTTTGAGCACCAACGTAAATC CACATGGAAGACGAGCAAAGCCGCATGA
Upstream 100 bases:
>100_bases ACGGCCCTTATTTCGGTTCAGTTCGGATATAACCCATTAACCGAATGAAACCGATTTATTAATAACGTCCATCCAAAATA AACCCCGCATAATTACATTT
Downstream 100 bases:
>100_bases AGAAGAAGAAACAGTACCGCCGCGCCCCAGTGCCCCATACCGCCCGCAACATGAGCATTATCAGTTTGGGCAAACCCGAA CCGGTTTTAACCACCGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Phage-Related Terminase ATPase Subunit; Terminase Related Protein; Bacteriophage Terminase; Orf16-Like Phage Protein; Phage Terminase ATPase Subunit P; Mu-Like Prophage FluMu Protein Gp; Prophage; ATPase Subunit Of Terminase; Phage Gene; Terminase Subunit; Phage P2 Terminase ATPase Subunit GpP-Like Protein; Bacteriophage Terminase Large Subunit; Prophage Large Terminase Protein; Fels-2 Prophage Protein; Phage Terminase Subunit GpP; Terminase Large Subunit; DNA-Dependent ATPase Terminase Subunit; Terminase ATPase Subunit Bacteriophage Origin; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage-Related Terminase
Number of amino acids: Translated: 595; Mature: 594
Protein sequence:
>595_residues MAKHSQTIIGVARSLYLHRWTPKEIANELNLPNARIIYYWAQKWHWADMLSHESIEEAINRRILVLANRDNKNELELKEI DSLIAQHCKLMAQKSKHTEKLAAIKAQTQGSYASGEEAAARDDNGGGKRKYRKNDISGIQQEELELFAGETLFFYQQYLR ANKHHAIRNILKSRQIGATWYFAFEALEDAIMSGDPQIFLSASRAQAEVFRSYIVNIAQQFFGVTLTGNPIRLSNGAELR FLSTNKNTAQSYSGHLYCDEYLWVPNFAKLNEVASAMATHDKWRTTYFSTPSAKTHQGYPFWTGEEWKQGDKQRSKITFP EFDEYRDGGRLCPDGQWRYVITLEDAIDGGFNLADIERLRNKYNRDTFNMLYMCVFVDSGDSVFKFHMLEKCGVDIEMWQ DHDFSAPRPFGNREVWGGFDPARSGDTSTFAIIAPPQFEGERFRVLVTFYWQGLNFNYQANQIKELFQRYNMTYIGVDIT GIGNGVFELVQNFAMRQAVAIHYGLESKNRLVMKMIDVIESQRIEWDAEAKEIPASFLAIRRTSTAKGGGMTFVADRTKE TGHADVFFAIAHAIDNEPLNFEHQRKSTWKTSKAA
Sequences:
>Translated_595_residues MAKHSQTIIGVARSLYLHRWTPKEIANELNLPNARIIYYWAQKWHWADMLSHESIEEAINRRILVLANRDNKNELELKEI DSLIAQHCKLMAQKSKHTEKLAAIKAQTQGSYASGEEAAARDDNGGGKRKYRKNDISGIQQEELELFAGETLFFYQQYLR ANKHHAIRNILKSRQIGATWYFAFEALEDAIMSGDPQIFLSASRAQAEVFRSYIVNIAQQFFGVTLTGNPIRLSNGAELR FLSTNKNTAQSYSGHLYCDEYLWVPNFAKLNEVASAMATHDKWRTTYFSTPSAKTHQGYPFWTGEEWKQGDKQRSKITFP EFDEYRDGGRLCPDGQWRYVITLEDAIDGGFNLADIERLRNKYNRDTFNMLYMCVFVDSGDSVFKFHMLEKCGVDIEMWQ DHDFSAPRPFGNREVWGGFDPARSGDTSTFAIIAPPQFEGERFRVLVTFYWQGLNFNYQANQIKELFQRYNMTYIGVDIT GIGNGVFELVQNFAMRQAVAIHYGLESKNRLVMKMIDVIESQRIEWDAEAKEIPASFLAIRRTSTAKGGGMTFVADRTKE TGHADVFFAIAHAIDNEPLNFEHQRKSTWKTSKAA >Mature_594_residues AKHSQTIIGVARSLYLHRWTPKEIANELNLPNARIIYYWAQKWHWADMLSHESIEEAINRRILVLANRDNKNELELKEID SLIAQHCKLMAQKSKHTEKLAAIKAQTQGSYASGEEAAARDDNGGGKRKYRKNDISGIQQEELELFAGETLFFYQQYLRA NKHHAIRNILKSRQIGATWYFAFEALEDAIMSGDPQIFLSASRAQAEVFRSYIVNIAQQFFGVTLTGNPIRLSNGAELRF LSTNKNTAQSYSGHLYCDEYLWVPNFAKLNEVASAMATHDKWRTTYFSTPSAKTHQGYPFWTGEEWKQGDKQRSKITFPE FDEYRDGGRLCPDGQWRYVITLEDAIDGGFNLADIERLRNKYNRDTFNMLYMCVFVDSGDSVFKFHMLEKCGVDIEMWQD HDFSAPRPFGNREVWGGFDPARSGDTSTFAIIAPPQFEGERFRVLVTFYWQGLNFNYQANQIKELFQRYNMTYIGVDITG IGNGVFELVQNFAMRQAVAIHYGLESKNRLVMKMIDVIESQRIEWDAEAKEIPASFLAIRRTSTAKGGGMTFVADRTKET GHADVFFAIAHAIDNEPLNFEHQRKSTWKTSKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68341; Mature: 68210
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHSQTIIGVARSLYLHRWTPKEIANELNLPNARIIYYWAQKWHWADMLSHESIEEAIN CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC RRILVLANRDNKNELELKEIDSLIAQHCKLMAQKSKHTEKLAAIKAQTQGSYASGEEAAA CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC RDDNGGGKRKYRKNDISGIQQEELELFAGETLFFYQQYLRANKHHAIRNILKSRQIGATW CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHH YFAFEALEDAIMSGDPQIFLSASRAQAEVFRSYIVNIAQQFFGVTLTGNPIRLSNGAELR HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCEEEEECCEEEECCCCEEE FLSTNKNTAQSYSGHLYCDEYLWVPNFAKLNEVASAMATHDKWRTTYFSTPSAKTHQGYP EEECCCCCHHHCCCCEEECCEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC FWTGEEWKQGDKQRSKITFPEFDEYRDGGRLCPDGQWRYVITLEDAIDGGFNLADIERLR CCCCHHHHCCCHHHCCCCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH NKYNRDTFNMLYMCVFVDSGDSVFKFHMLEKCGVDIEMWQDHDFSAPRPFGNREVWGGFD HHHCCCHHEEEEEEEEEECCCCEEEEEEHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCC PARSGDTSTFAIIAPPQFEGERFRVLVTFYWQGLNFNYQANQIKELFQRYNMTYIGVDIT CCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEE GIGNGVFELVQNFAMRQAVAIHYGLESKNRLVMKMIDVIESQRIEWDAEAKEIPASFLAI ECCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHE RRTSTAKGGGMTFVADRTKETGHADVFFAIAHAIDNEPLNFEHQRKSTWKTSKAA ECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure AKHSQTIIGVARSLYLHRWTPKEIANELNLPNARIIYYWAQKWHWADMLSHESIEEAIN CCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC RRILVLANRDNKNELELKEIDSLIAQHCKLMAQKSKHTEKLAAIKAQTQGSYASGEEAAA CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC RDDNGGGKRKYRKNDISGIQQEELELFAGETLFFYQQYLRANKHHAIRNILKSRQIGATW CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHH YFAFEALEDAIMSGDPQIFLSASRAQAEVFRSYIVNIAQQFFGVTLTGNPIRLSNGAELR HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCEEEEECCEEEECCCCEEE FLSTNKNTAQSYSGHLYCDEYLWVPNFAKLNEVASAMATHDKWRTTYFSTPSAKTHQGYP EEECCCCCHHHCCCCEEECCEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC FWTGEEWKQGDKQRSKITFPEFDEYRDGGRLCPDGQWRYVITLEDAIDGGFNLADIERLR CCCCHHHHCCCHHHCCCCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH NKYNRDTFNMLYMCVFVDSGDSVFKFHMLEKCGVDIEMWQDHDFSAPRPFGNREVWGGFD HHHCCCHHEEEEEEEEEECCCCEEEEEEHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCC PARSGDTSTFAIIAPPQFEGERFRVLVTFYWQGLNFNYQANQIKELFQRYNMTYIGVDIT CCCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEE GIGNGVFELVQNFAMRQAVAIHYGLESKNRLVMKMIDVIESQRIEWDAEAKEIPASFLAI ECCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHE RRTSTAKGGGMTFVADRTKETGHADVFFAIAHAIDNEPLNFEHQRKSTWKTSKAA ECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA