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The map label for this gene is 170023145

Identifier: 170023145

GI number: 170023145

Start: 1017736

End: 1018761

Strand: Reverse

Name: 170023145

Synonym: YPK_0896

Alternate gene names: NA

Gene position: 1018761-1017736 (Counterclockwise)

Preceding gene: 170023146

Following gene: 170023144

Centisome position: 21.72

GC content: 52.53

Gene sequence:

>1026_bases
ATGAAGAAGAAGAAACAGTACCGCCGCGCCCCAGTGCCCCATACCGCCCGCAACATGAGCATTATCAGTTTGGGCAAACC
CGAACCGGTTTTAACCACCGGCACCGATTATCAAGACATCTGGTATGACAGTGACTTTGACCACTACAGCCAACCCATTG
ACCGGCTGGCCCTTGCCCAACTGGTTAATCTCAATGGCCAGCACGGCGGCGTTCTCTATGCCCGGCGCAATATGGTGGCC
GCTGACTATGTCGGTGGCGGCCTGACCCATGAGGAACTAAAAGCCGGGGTATTCGATTATCTGACCTTTGGTGATGTGGC
CATTGCGAAAGTGCGTAACGGCTGGGGTGAAGTGGTGGCACTGGCTCCGCTGCCCTCGCTTTATTTGCGGGTGCGTAAAG
ACGACAGCATCGTAATTTTGCAGAAAGGGGAACCGCTGGTTTATGGCCAGGAGGATGTGGTTTACCTCAAACAGTATGAC
CCGCAACAGCAGGTGTATGGCCTGCCGGATTATATCGGCGGGATTCATGCCGCTTTACTCAACTCCGAGGCCACCATTTT
TCGCCGCCGTTACTATCACAACGGGGCGCACACCGGCGGGATTATCTACACCAATGACCCAAATCTCAGCACCGAAGTGG
AAGACGAGATTATAAAAAGTCTGGAACAGAGCAAGGGGATCGGCAATTTCAGCACCTTGTTTGTCAACATTCCGAAAGGC
GACCCGGAAGGGATTAAATTTATTCCGATTGGCGATATCAGCGCCAAAGATGAATTTGCCAATATCAAGAATATCAGTGC
GCAGGATATTTTGACCGCTCACCGTTACCCGGCAGGGCTGGCGGGCATTATTCCCAGCAATAGCGCGGGATTGGGTGACC
CGGAAAAGGCGCGGGCAACCTACCGCAAAGATGAAGTTATTCCGCTGCAACGCATGATTATGGACGCTATCAACAGCGAC
CCACAGATCCCGGCGCATTTACACATTAAATTCGACATTGAAGATACACAATCGGGTGCGTCATGA

Upstream 100 bases:

>100_bases
GCCACGCCGATGTATTTTTCGCCATTGCCCACGCAATAGATAATGAACCGCTCAACTTTGAGCACCAACGTAAATCCACA
TGGAAGACGAGCAAAGCCGC

Downstream 100 bases:

>100_bases
GCAGAAACACGGTAAAATTCCAGAAGTTCGCCACTTTTGGAGCCAGAAACATGCGCGTTATGAAAATTGAATGTACAGAA
TGCGGTGCTAAGGCTGTCAT

Product: PBSX family phage portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MKKKKQYRRAPVPHTARNMSIISLGKPEPVLTTGTDYQDIWYDSDFDHYSQPIDRLALAQLVNLNGQHGGVLYARRNMVA
ADYVGGGLTHEELKAGVFDYLTFGDVAIAKVRNGWGEVVALAPLPSLYLRVRKDDSIVILQKGEPLVYGQEDVVYLKQYD
PQQQVYGLPDYIGGIHAALLNSEATIFRRRYYHNGAHTGGIIYTNDPNLSTEVEDEIIKSLEQSKGIGNFSTLFVNIPKG
DPEGIKFIPIGDISAKDEFANIKNISAQDILTAHRYPAGLAGIIPSNSAGLGDPEKARATYRKDEVIPLQRMIMDAINSD
PQIPAHLHIKFDIEDTQSGAS

Sequences:

>Translated_341_residues
MKKKKQYRRAPVPHTARNMSIISLGKPEPVLTTGTDYQDIWYDSDFDHYSQPIDRLALAQLVNLNGQHGGVLYARRNMVA
ADYVGGGLTHEELKAGVFDYLTFGDVAIAKVRNGWGEVVALAPLPSLYLRVRKDDSIVILQKGEPLVYGQEDVVYLKQYD
PQQQVYGLPDYIGGIHAALLNSEATIFRRRYYHNGAHTGGIIYTNDPNLSTEVEDEIIKSLEQSKGIGNFSTLFVNIPKG
DPEGIKFIPIGDISAKDEFANIKNISAQDILTAHRYPAGLAGIIPSNSAGLGDPEKARATYRKDEVIPLQRMIMDAINSD
PQIPAHLHIKFDIEDTQSGAS
>Mature_341_residues
MKKKKQYRRAPVPHTARNMSIISLGKPEPVLTTGTDYQDIWYDSDFDHYSQPIDRLALAQLVNLNGQHGGVLYARRNMVA
ADYVGGGLTHEELKAGVFDYLTFGDVAIAKVRNGWGEVVALAPLPSLYLRVRKDDSIVILQKGEPLVYGQEDVVYLKQYD
PQQQVYGLPDYIGGIHAALLNSEATIFRRRYYHNGAHTGGIIYTNDPNLSTEVEDEIIKSLEQSKGIGNFSTLFVNIPKG
DPEGIKFIPIGDISAKDEFANIKNISAQDILTAHRYPAGLAGIIPSNSAGLGDPEKARATYRKDEVIPLQRMIMDAINSD
PQIPAHLHIKFDIEDTQSGAS

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 37720; Mature: 37720

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKKQYRRAPVPHTARNMSIISLGKPEPVLTTGTDYQDIWYDSDFDHYSQPIDRLALAQ
CCCHHHHHCCCCCCCCCCEEEEECCCCCCEEECCCCCHHCCCCCCCHHHHHHHHHHHHHH
LVNLNGQHGGVLYARRNMVAADYVGGGLTHEELKAGVFDYLTFGDVAIAKVRNGWGEVVA
HHCCCCCCCCEEEEECCEEEEHHCCCCCCHHHHHHHHHHHHHHCCEEEEEHHCCCCCEEE
LAPLPSLYLRVRKDDSIVILQKGEPLVYGQEDVVYLKQYDPQQQVYGLPDYIGGIHAALL
ECCCCCEEEEEECCCCEEEEECCCCEEECCCCEEEEECCCCHHHHCCCHHHHHHHHHHHH
NSEATIFRRRYYHNGAHTGGIIYTNDPNLSTEVEDEIIKSLEQSKGIGNFSTLFVNIPKG
CCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC
DPEGIKFIPIGDISAKDEFANIKNISAQDILTAHRYPAGLAGIIPSNSAGLGDPEKARAT
CCCCEEEEEECCCCCCHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHH
YRKDEVIPLQRMIMDAINSDPQIPAHLHIKFDIEDTQSGAS
HCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MKKKKQYRRAPVPHTARNMSIISLGKPEPVLTTGTDYQDIWYDSDFDHYSQPIDRLALAQ
CCCHHHHHCCCCCCCCCCEEEEECCCCCCEEECCCCCHHCCCCCCCHHHHHHHHHHHHHH
LVNLNGQHGGVLYARRNMVAADYVGGGLTHEELKAGVFDYLTFGDVAIAKVRNGWGEVVA
HHCCCCCCCCEEEEECCEEEEHHCCCCCCHHHHHHHHHHHHHHCCEEEEEHHCCCCCEEE
LAPLPSLYLRVRKDDSIVILQKGEPLVYGQEDVVYLKQYDPQQQVYGLPDYIGGIHAALL
ECCCCCEEEEEECCCCEEEEECCCCEEECCCCEEEEECCCCHHHHCCCHHHHHHHHHHHH
NSEATIFRRRYYHNGAHTGGIIYTNDPNLSTEVEDEIIKSLEQSKGIGNFSTLFVNIPKG
CCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC
DPEGIKFIPIGDISAKDEFANIKNISAQDILTAHRYPAGLAGIIPSNSAGLGDPEKARAT
CCCCEEEEEECCCCCCHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHH
YRKDEVIPLQRMIMDAINSDPQIPAHLHIKFDIEDTQSGAS
HCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]