| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is abgT [H]
Identifier: 170022997
GI number: 170022997
Start: 823482
End: 825038
Strand: Direct
Name: abgT [H]
Synonym: YPK_0748
Alternate gene names: 170022997
Gene position: 823482-825038 (Clockwise)
Preceding gene: 170022992
Following gene: 170022998
Centisome position: 17.56
GC content: 48.62
Gene sequence:
>1557_bases ATGTCAGATGTAAAACCGCAGAACGATCGGCAGACCGGTATACTGAACGCGATTGAGCGTATCGGTAATGCCATGCCAGA CATCACCATGCTATTTATTTACGCGCTGGGGGTGTGCTGGGCACTCTCCTTTGGATTATCGTTTATCAACTTTGATTATT TCCACCCTCTGACTGGTGATCAGATTAAAGTTACCAATATGTTGGCACCGGTTGAACTGGTGACCTTTATTACCACTATG GTCAAAAACTTTATTAACTTCCCACCGCTGGCGATCACCATTGTTGCTACTTTGGGGATTGGTATTGCCGAGGGCAGTGG CTTTATTCAGGTGATGTTGAAAAAAATGCTCAATGTCACTCCACAGCGTATTTTAACGCCAGCGGTCGTCTTTATCGGTG TGGTTAGCCATGTCGCCTCTGATTCGGCTTATGTGATCCTGATGCCTGTCGCCGCGATGATGTTCTATGCCAGTGGGCGT CACCCATTAGCCGGTATTGCCGCCGCTTTCGCTGGGTTAGCCGGGGGATTCTCTGCCAGCTATACGCCATCGATTATCGA CCCGATTATGCAGGGCTTCACCCAAGGGGCCGCGCACATTATTGACCCAAGCTATAACGTCAATGTGTTGTGTAACTACT TCCTCAGTTTCGGTAGCACCTTTGGCGTGATTTTGGTGTGCTGGTTTATCACCGATAAAATTGTGGAGCCTCGTCTGCTT AAATCGATGCCACTGAATAGCGATCTCAGTGGGCTGCAGAGCAATAATGAGTTACAGAAGGTCACTCCGCAGGAGAGTAA AGCGTTTAAACGGGCAGGGCTGGTTATGTTGCTGATGTTGATTGGCCTGGCCGCCGCACTCTATCCGGAAAACTCCTTAT TGCGTTCACCAGAGGGTAGCCTGACCCGCCCTGATGCACCGATTATGCAAGCGATTGTGCCACTGCTGTTCTTTATGTTT GCTATTCCTGGCCTGATCTATGGTTTCAGTTCTGGCACCTTTAAGAGCACCAAAGATGTTACCGCCAGCATGGAAAACAT TACCCGCTCATTGGTATCATTTTTGGTCTTTAGCTTCTTCTGCGCCCAGTTCCTCTATTCATTCAGCCACTCTAATATTG GCACATTAATGGCGATTTCTGGCGCGGACTTCCTGCGTACGCTGGCGATGCCCGCTGGTTTCACGATTTTAGGTGTGATC CTGTTATCTTGTGCGCTGGATATTATTATTACGTCAGCGTCATCCAAATGGTCCATTCTGGCACCGATATTGGTTCCAAT GCTGATGGCCGTAGGGATTTCGCCAGAGTTGACCCAAGCCAGTTTCCGCGTTAGCTCAACAGTGAATATCTCGACACCGA TGTTTGCCTTCTATCCGCTGATCATTATGTATTGTCGCCAGTATTGTTCGAAGACCGGCGTCGGGACGTTATGCGCCATG ATGCTGCCTTATACACTAGGGTTAACCGTGGTACTGACCCTGATGTTGTATCTGTTCTGGGGTCTGGATATTCCATTAGG TTTCCAGAGTGGGTATACGTATCCAGCAACTCAATGA
Upstream 100 bases:
>100_bases TCTTCTCTTACATCCACGCAGTACCTCTACTGAGGCAGGAAATCATCAGTATCTCCTGCTCGCTTTAGCCATGACATTTT TACAAGGGAAAGGACAGAAT
Downstream 100 bases:
>100_bases CCCCCTTCGGCCTTGACGCTGTAGGGGCGTTAGCTGCGCGCACTCGCCCGAATCACTTACTAATGTAAGCTCATCGGGAC TCACTTGCTGGCTGCCTACC
Product: AbgT putative transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MSDVKPQNDRQTGILNAIERIGNAMPDITMLFIYALGVCWALSFGLSFINFDYFHPLTGDQIKVTNMLAPVELVTFITTM VKNFINFPPLAITIVATLGIGIAEGSGFIQVMLKKMLNVTPQRILTPAVVFIGVVSHVASDSAYVILMPVAAMMFYASGR HPLAGIAAAFAGLAGGFSASYTPSIIDPIMQGFTQGAAHIIDPSYNVNVLCNYFLSFGSTFGVILVCWFITDKIVEPRLL KSMPLNSDLSGLQSNNELQKVTPQESKAFKRAGLVMLLMLIGLAAALYPENSLLRSPEGSLTRPDAPIMQAIVPLLFFMF AIPGLIYGFSSGTFKSTKDVTASMENITRSLVSFLVFSFFCAQFLYSFSHSNIGTLMAISGADFLRTLAMPAGFTILGVI LLSCALDIIITSASSKWSILAPILVPMLMAVGISPELTQASFRVSSTVNISTPMFAFYPLIIMYCRQYCSKTGVGTLCAM MLPYTLGLTVVLTLMLYLFWGLDIPLGFQSGYTYPATQ
Sequences:
>Translated_518_residues MSDVKPQNDRQTGILNAIERIGNAMPDITMLFIYALGVCWALSFGLSFINFDYFHPLTGDQIKVTNMLAPVELVTFITTM VKNFINFPPLAITIVATLGIGIAEGSGFIQVMLKKMLNVTPQRILTPAVVFIGVVSHVASDSAYVILMPVAAMMFYASGR HPLAGIAAAFAGLAGGFSASYTPSIIDPIMQGFTQGAAHIIDPSYNVNVLCNYFLSFGSTFGVILVCWFITDKIVEPRLL KSMPLNSDLSGLQSNNELQKVTPQESKAFKRAGLVMLLMLIGLAAALYPENSLLRSPEGSLTRPDAPIMQAIVPLLFFMF AIPGLIYGFSSGTFKSTKDVTASMENITRSLVSFLVFSFFCAQFLYSFSHSNIGTLMAISGADFLRTLAMPAGFTILGVI LLSCALDIIITSASSKWSILAPILVPMLMAVGISPELTQASFRVSSTVNISTPMFAFYPLIIMYCRQYCSKTGVGTLCAM MLPYTLGLTVVLTLMLYLFWGLDIPLGFQSGYTYPATQ >Mature_517_residues SDVKPQNDRQTGILNAIERIGNAMPDITMLFIYALGVCWALSFGLSFINFDYFHPLTGDQIKVTNMLAPVELVTFITTMV KNFINFPPLAITIVATLGIGIAEGSGFIQVMLKKMLNVTPQRILTPAVVFIGVVSHVASDSAYVILMPVAAMMFYASGRH PLAGIAAAFAGLAGGFSASYTPSIIDPIMQGFTQGAAHIIDPSYNVNVLCNYFLSFGSTFGVILVCWFITDKIVEPRLLK SMPLNSDLSGLQSNNELQKVTPQESKAFKRAGLVMLLMLIGLAAALYPENSLLRSPEGSLTRPDAPIMQAIVPLLFFMFA IPGLIYGFSSGTFKSTKDVTASMENITRSLVSFLVFSFFCAQFLYSFSHSNIGTLMAISGADFLRTLAMPAGFTILGVIL LSCALDIIITSASSKWSILAPILVPMLMAVGISPELTQASFRVSSTVNISTPMFAFYPLIIMYCRQYCSKTGVGTLCAMM LPYTLGLTVVLTLMLYLFWGLDIPLGFQSGYTYPATQ
Specific function: Essential for aminobenzoyl-glutamate utilization. May transport aminobenzoyl-glutamate into the cell. Seems also to increase the sensitivity to low levels of aminobenzoyl-glutamate. Sufficient to confer aminobenzoyl-glutamate utilization phenotype [H]
COG id: COG2978
COG function: function code H; Putative p-aminobenzoyl-glutamate transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081879, Length=491, Percent_Identity=34.0122199592668, Blast_Score=259, Evalue=3e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004697 - InterPro: IPR011540 [H]
Pfam domain/function: PF03806 ABG_transport [H]
EC number: NA
Molecular weight: Translated: 56163; Mature: 56032
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVKPQNDRQTGILNAIERIGNAMPDITMLFIYALGVCWALSFGLSFINFDYFHPLTGD CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC QIKVTNMLAPVELVTFITTMVKNFINFPPLAITIVATLGIGIAEGSGFIQVMLKKMLNVT CEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHCCCCHHHHHHHHHHHCCC PQRILTPAVVFIGVVSHVASDSAYVILMPVAAMMFYASGRHPLAGIAAAFAGLAGGFSAS HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC YTPSIIDPIMQGFTQGAAHIIDPSYNVNVLCNYFLSFGSTFGVILVCWFITDKIVEPRLL CCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHH KSMPLNSDLSGLQSNNELQKVTPQESKAFKRAGLVMLLMLIGLAAALYPENSLLRSPEGS HHCCCCCCHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCC LTRPDAPIMQAIVPLLFFMFAIPGLIYGFSSGTFKSTKDVTASMENITRSLVSFLVFSFF CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH CAQFLYSFSHSNIGTLMAISGADFLRTLAMPAGFTILGVILLSCALDIIITSASSKWSIL HHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH APILVPMLMAVGISPELTQASFRVSSTVNISTPMFAFYPLIIMYCRQYCSKTGVGTLCAM HHHHHHHHHHHCCCCCHHHHHEEECCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH MLPYTLGLTVVLTLMLYLFWGLDIPLGFQSGYTYPATQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDVKPQNDRQTGILNAIERIGNAMPDITMLFIYALGVCWALSFGLSFINFDYFHPLTGD CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC QIKVTNMLAPVELVTFITTMVKNFINFPPLAITIVATLGIGIAEGSGFIQVMLKKMLNVT CEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHCCCCHHHHHHHHHHHCCC PQRILTPAVVFIGVVSHVASDSAYVILMPVAAMMFYASGRHPLAGIAAAFAGLAGGFSAS HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC YTPSIIDPIMQGFTQGAAHIIDPSYNVNVLCNYFLSFGSTFGVILVCWFITDKIVEPRLL CCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHH KSMPLNSDLSGLQSNNELQKVTPQESKAFKRAGLVMLLMLIGLAAALYPENSLLRSPEGS HHCCCCCCHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCC LTRPDAPIMQAIVPLLFFMFAIPGLIYGFSSGTFKSTKDVTASMENITRSLVSFLVFSFF CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH CAQFLYSFSHSNIGTLMAISGADFLRTLAMPAGFTILGVILLSCALDIIITSASSKWSIL HHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH APILVPMLMAVGISPELTQASFRVSSTVNISTPMFAFYPLIIMYCRQYCSKTGVGTLCAM HHHHHHHHHHHCCCCCHHHHHEEECCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH MLPYTLGLTVVLTLMLYLFWGLDIPLGFQSGYTYPATQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9829935; 9097039; 9278503; 2825131; 7567469 [H]