Click here to switch to the map view.

The map label for this gene is arpB [H]

Identifier: 170022990

GI number: 170022990

Start: 801066

End: 802562

Strand: Reverse

Name: arpB [H]

Synonym: YPK_0741

Alternate gene names: 170022990

Gene position: 802562-801066 (Counterclockwise)

Preceding gene: 170022993

Following gene: 170022986

Centisome position: 17.11

GC content: 33.07

Gene sequence:

>1497_bases
ATGGATATTTTTTCAAGTTTTAATTTATACAATAAAGAATTGTATAGTAACAGCCCCACACACCCTGCCTTTGATAAAAG
TAAACCGTATATATCAGAATTAAAAAGTCGTGAAGAGAAAAATCTAAACGGTGAAGTCAACTTTAAAGACAATGTTGACA
AACTGATTATGTGCCGTCATCTATCAAGTCAATATATATTGGATTCATTATCCGATGAGGATACCGGAAAGGTTGATTTA
GATAAATTCTCATCCAAAGACATCATCGCAAACCGAATAACCAGCAACGTTGAAGAGCTTTACGAGCAACTTCAGTTGCA
AGCAAAAGAAATTTATTTTATTCCTAACAATGAATTTGGCATCTGTCTCAGTAAGATCTTTAAGAGTATGGAGAGAAAGT
CAGAAAATACTCAATCCATACTACTTGAGTCATTCAACCACGCGATGGCAGTAAGATTGAGAATCAAGGAAAAGGAAAAT
GAAAACAACAACACGAAAAGGTACGTCATTAGTGTTTATGACCCCAACATGACTAATGTTACTGTCCGCTGTGAGGTGGA
TGATTTAGTTAAAGTGAGAGATTTTCAGGTGAAGGATTTTATTAATCATCATTTATTTGGCAACTTTTACAAGAGCTACT
ACCCAACTGAATCAAGTGAAATATCAACCCTTTATATTTGTAAAAAACCAGCTAACGAAAGTGTTCCTGAGTGTACAGGG
AAAAAAATTACATTTTATGATTGGATAGCCTTACCTGCCTCGTCTATTAATTTATACACTTTCCTCATTGAGGGATTCTC
ACAAGAAATTAAAAATCTAAAAAATCAATTAGAAATAATATATAAGAAAAACCCGGAAAAGCTGATGGAAATACTTACCG
CTAAAAGTCCCGATGGAATAATGGGTTTTGAACAAGCATTACTTAATGATCACGCTGATGCCATAAACGCATTTGGCGAG
CTGCTACAATTAGTTCCCGAAAACAAACGCAGTGAATTACTTGTAAATAATAAAAAAACAAAGTACACATTATTTGATAT
AGTTTGTTCTAGAGAAAAAAATAAAACAACAATGGCATTCAAAAATATAGTGTCACTTATCTCTAAAAATGAGCGTTATA
AATTAATAGAATCAAAAGTAAACATACTTGATACTGTTATTAATTCACTTATTACCAAAAAAGACAGTAGTCATCTTAAC
GAAATTTTTGAATTAATCTCATTAGCGCCAGAAGAGCATGTCATCAACTTACTGTCCAATATAGATATAACGCAATCTCT
TGAATATTCGTTATATCACAATGATACTAAATCGATAAATATCATCACTAAAATGCTCAAGGGATTATCTGAACAAGGTC
GGGAAAATATACCTTTTCTGAGAAAATTAGATGAGTCTATAGTGAATATGTATATCCAACTCGGTAAAGAAATAGCCGTT
GCTGCCTACCGTGAATTATTGGCACTGAAACCGGGAACGCTCAAAGAGAGTAAATAG

Upstream 100 bases:

>100_bases
TCATTAATATACAGATTTTACCTTATTTTATATTTAGATGACTTACTAGAAAATATCAACTACATATTTGATGATGCCGT
CAAAAAACATAAGGTGAAAT

Downstream 100 bases:

>100_bases
CCATTCAGTCACTGCCCCCAAAGAGTCGCCCATACCCACCGGTCTTAACCGGCGGGTATGGGCTTTATGACAAAACAGCA
TTGTGACAAAACAGCATTAA

Product: ShET2 enterotoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MDIFSSFNLYNKELYSNSPTHPAFDKSKPYISELKSREEKNLNGEVNFKDNVDKLIMCRHLSSQYILDSLSDEDTGKVDL
DKFSSKDIIANRITSNVEELYEQLQLQAKEIYFIPNNEFGICLSKIFKSMERKSENTQSILLESFNHAMAVRLRIKEKEN
ENNNTKRYVISVYDPNMTNVTVRCEVDDLVKVRDFQVKDFINHHLFGNFYKSYYPTESSEISTLYICKKPANESVPECTG
KKITFYDWIALPASSINLYTFLIEGFSQEIKNLKNQLEIIYKKNPEKLMEILTAKSPDGIMGFEQALLNDHADAINAFGE
LLQLVPENKRSELLVNNKKTKYTLFDIVCSREKNKTTMAFKNIVSLISKNERYKLIESKVNILDTVINSLITKKDSSHLN
EIFELISLAPEEHVINLLSNIDITQSLEYSLYHNDTKSINIITKMLKGLSEQGRENIPFLRKLDESIVNMYIQLGKEIAV
AAYRELLALKPGTLKESK

Sequences:

>Translated_498_residues
MDIFSSFNLYNKELYSNSPTHPAFDKSKPYISELKSREEKNLNGEVNFKDNVDKLIMCRHLSSQYILDSLSDEDTGKVDL
DKFSSKDIIANRITSNVEELYEQLQLQAKEIYFIPNNEFGICLSKIFKSMERKSENTQSILLESFNHAMAVRLRIKEKEN
ENNNTKRYVISVYDPNMTNVTVRCEVDDLVKVRDFQVKDFINHHLFGNFYKSYYPTESSEISTLYICKKPANESVPECTG
KKITFYDWIALPASSINLYTFLIEGFSQEIKNLKNQLEIIYKKNPEKLMEILTAKSPDGIMGFEQALLNDHADAINAFGE
LLQLVPENKRSELLVNNKKTKYTLFDIVCSREKNKTTMAFKNIVSLISKNERYKLIESKVNILDTVINSLITKKDSSHLN
EIFELISLAPEEHVINLLSNIDITQSLEYSLYHNDTKSINIITKMLKGLSEQGRENIPFLRKLDESIVNMYIQLGKEIAV
AAYRELLALKPGTLKESK
>Mature_498_residues
MDIFSSFNLYNKELYSNSPTHPAFDKSKPYISELKSREEKNLNGEVNFKDNVDKLIMCRHLSSQYILDSLSDEDTGKVDL
DKFSSKDIIANRITSNVEELYEQLQLQAKEIYFIPNNEFGICLSKIFKSMERKSENTQSILLESFNHAMAVRLRIKEKEN
ENNNTKRYVISVYDPNMTNVTVRCEVDDLVKVRDFQVKDFINHHLFGNFYKSYYPTESSEISTLYICKKPANESVPECTG
KKITFYDWIALPASSINLYTFLIEGFSQEIKNLKNQLEIIYKKNPEKLMEILTAKSPDGIMGFEQALLNDHADAINAFGE
LLQLVPENKRSELLVNNKKTKYTLFDIVCSREKNKTTMAFKNIVSLISKNERYKLIESKVNILDTVINSLITKKDSSHLN
EIFELISLAPEEHVINLLSNIDITQSLEYSLYHNDTKSINIITKMLKGLSEQGRENIPFLRKLDESIVNMYIQLGKEIAV
AAYRELLALKPGTLKESK

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Escherichia coli, GI1790447, Length=370, Percent_Identity=23.7837837837838, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR012927 [H]

Pfam domain/function: PF07906 Toxin_15 [H]

EC number: NA

Molecular weight: Translated: 57434; Mature: 57434

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFSSFNLYNKELYSNSPTHPAFDKSKPYISELKSREEKNLNGEVNFKDNVDKLIMCRH
CCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
LSSQYILDSLSDEDTGKVDLDKFSSKDIIANRITSNVEELYEQLQLQAKEIYFIPNNEFG
CCHHHHHHHCCCCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHH
ICLSKIFKSMERKSENTQSILLESFNHAMAVRLRIKEKENENNNTKRYVISVYDPNMTNV
HHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCEE
TVRCEVDDLVKVRDFQVKDFINHHLFGNFYKSYYPTESSEISTLYICKKPANESVPECTG
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCC
KKITFYDWIALPASSINLYTFLIEGFSQEIKNLKNQLEIIYKKNPEKLMEILTAKSPDGI
CEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
MGFEQALLNDHADAINAFGELLQLVPENKRSELLVNNKKTKYTLFDIVCSREKNKTTMAF
HHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEHHHHHHCCCCCCHHHHH
KNIVSLISKNERYKLIESKVNILDTVINSLITKKDSSHLNEIFELISLAPEEHVINLLSN
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHC
IDITQSLEYSLYHNDTKSINIITKMLKGLSEQGRENIPFLRKLDESIVNMYIQLGKEIAV
CCHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AAYRELLALKPGTLKESK
HHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDIFSSFNLYNKELYSNSPTHPAFDKSKPYISELKSREEKNLNGEVNFKDNVDKLIMCRH
CCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
LSSQYILDSLSDEDTGKVDLDKFSSKDIIANRITSNVEELYEQLQLQAKEIYFIPNNEFG
CCHHHHHHHCCCCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHH
ICLSKIFKSMERKSENTQSILLESFNHAMAVRLRIKEKENENNNTKRYVISVYDPNMTNV
HHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCEE
TVRCEVDDLVKVRDFQVKDFINHHLFGNFYKSYYPTESSEISTLYICKKPANESVPECTG
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCC
KKITFYDWIALPASSINLYTFLIEGFSQEIKNLKNQLEIIYKKNPEKLMEILTAKSPDGI
CEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
MGFEQALLNDHADAINAFGELLQLVPENKRSELLVNNKKTKYTLFDIVCSREKNKTTMAF
HHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEHHHHHHCCCCCCHHHHH
KNIVSLISKNERYKLIESKVNILDTVINSLITKKDSSHLNEIFELISLAPEEHVINLLSN
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHC
IDITQSLEYSLYHNDTKSINIITKMLKGLSEQGRENIPFLRKLDESIVNMYIQLGKEIAV
CCHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AAYRELLALKPGTLKESK
HHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]