Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is tfaR [C]

Identifier: 170022878

GI number: 170022878

Start: 686292

End: 686642

Strand: Direct

Name: tfaR [C]

Synonym: YPK_0627

Alternate gene names: 170022878

Gene position: 686292-686642 (Clockwise)

Preceding gene: 170022877

Following gene: 170022879

Centisome position: 14.63

GC content: 52.14

Gene sequence:

>351_bases
ATGGAACAGACTTATCAGCCCGGACGAGTTATTAACATAGGCGCTGGCCCGGCCCCTAAAGATTGCTTTGGACGCTCATA
CATGAGTGTGCAAATCGCTGGACGCCCGTCTGAATGGCAACCCGCCCCAATGACTTCATCGGATGCCCGAGATATCAAAG
CCCAGGCATTGACGGAGGCTTATATTCAGGTCACCGCATTGCAAGCCGCTGTCAGCACCCAGTTAGCGACTCCCGAAGAA
ATAACCGAATTGGTGTTGTGGCAAACCTACCTGGTACTGATGAACCGCGTCGTTCCTGATAGTCCTCTTGATATTGTTTG
GCCGAAAAAGCCAGAGGGTGGACTGTCATGA

Upstream 100 bases:

>100_bases
AAGACGTTCTACCGTTGGGGCAGCACCCAGCATTCAGGCACTGGCGCGTCAGATATTGCGTCAAGGCATCAATAAACATG
CTGCGGTGAAGGGGTAAGGC

Downstream 100 bases:

>100_bases
TAAATCCTAACATCGCTCACCTTCTTGGCATCTCACGAAAAACCACCGCAACAAAACAACCTACGACAAAAAAGGCAGGT
TCATTGATGAAAAACTTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MEQTYQPGRVINIGAGPAPKDCFGRSYMSVQIAGRPSEWQPAPMTSSDARDIKAQALTEAYIQVTALQAAVSTQLATPEE
ITELVLWQTYLVLMNRVVPDSPLDIVWPKKPEGGLS

Sequences:

>Translated_116_residues
MEQTYQPGRVINIGAGPAPKDCFGRSYMSVQIAGRPSEWQPAPMTSSDARDIKAQALTEAYIQVTALQAAVSTQLATPEE
ITELVLWQTYLVLMNRVVPDSPLDIVWPKKPEGGLS
>Mature_116_residues
MEQTYQPGRVINIGAGPAPKDCFGRSYMSVQIAGRPSEWQPAPMTSSDARDIKAQALTEAYIQVTALQAAVSTQLATPEE
ITELVLWQTYLVLMNRVVPDSPLDIVWPKKPEGGLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12688; Mature: 12688

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTYQPGRVINIGAGPAPKDCFGRSYMSVQIAGRPSEWQPAPMTSSDARDIKAQALTEA
CCCCCCCCCEEEECCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
YIQVTALQAAVSTQLATPEEITELVLWQTYLVLMNRVVPDSPLDIVWPKKPEGGLS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MEQTYQPGRVINIGAGPAPKDCFGRSYMSVQIAGRPSEWQPAPMTSSDARDIKAQALTEA
CCCCCCCCCEEEECCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
YIQVTALQAAVSTQLATPEEITELVLWQTYLVLMNRVVPDSPLDIVWPKKPEGGLS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA