| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is tfaR [C]
Identifier: 170022878
GI number: 170022878
Start: 686292
End: 686642
Strand: Direct
Name: tfaR [C]
Synonym: YPK_0627
Alternate gene names: 170022878
Gene position: 686292-686642 (Clockwise)
Preceding gene: 170022877
Following gene: 170022879
Centisome position: 14.63
GC content: 52.14
Gene sequence:
>351_bases ATGGAACAGACTTATCAGCCCGGACGAGTTATTAACATAGGCGCTGGCCCGGCCCCTAAAGATTGCTTTGGACGCTCATA CATGAGTGTGCAAATCGCTGGACGCCCGTCTGAATGGCAACCCGCCCCAATGACTTCATCGGATGCCCGAGATATCAAAG CCCAGGCATTGACGGAGGCTTATATTCAGGTCACCGCATTGCAAGCCGCTGTCAGCACCCAGTTAGCGACTCCCGAAGAA ATAACCGAATTGGTGTTGTGGCAAACCTACCTGGTACTGATGAACCGCGTCGTTCCTGATAGTCCTCTTGATATTGTTTG GCCGAAAAAGCCAGAGGGTGGACTGTCATGA
Upstream 100 bases:
>100_bases AAGACGTTCTACCGTTGGGGCAGCACCCAGCATTCAGGCACTGGCGCGTCAGATATTGCGTCAAGGCATCAATAAACATG CTGCGGTGAAGGGGTAAGGC
Downstream 100 bases:
>100_bases TAAATCCTAACATCGCTCACCTTCTTGGCATCTCACGAAAAACCACCGCAACAAAACAACCTACGACAAAAAAGGCAGGT TCATTGATGAAAAACTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MEQTYQPGRVINIGAGPAPKDCFGRSYMSVQIAGRPSEWQPAPMTSSDARDIKAQALTEAYIQVTALQAAVSTQLATPEE ITELVLWQTYLVLMNRVVPDSPLDIVWPKKPEGGLS
Sequences:
>Translated_116_residues MEQTYQPGRVINIGAGPAPKDCFGRSYMSVQIAGRPSEWQPAPMTSSDARDIKAQALTEAYIQVTALQAAVSTQLATPEE ITELVLWQTYLVLMNRVVPDSPLDIVWPKKPEGGLS >Mature_116_residues MEQTYQPGRVINIGAGPAPKDCFGRSYMSVQIAGRPSEWQPAPMTSSDARDIKAQALTEAYIQVTALQAAVSTQLATPEE ITELVLWQTYLVLMNRVVPDSPLDIVWPKKPEGGLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12688; Mature: 12688
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQTYQPGRVINIGAGPAPKDCFGRSYMSVQIAGRPSEWQPAPMTSSDARDIKAQALTEA CCCCCCCCCEEEECCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH YIQVTALQAAVSTQLATPEEITELVLWQTYLVLMNRVVPDSPLDIVWPKKPEGGLS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure MEQTYQPGRVINIGAGPAPKDCFGRSYMSVQIAGRPSEWQPAPMTSSDARDIKAQALTEA CCCCCCCCCEEEECCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH YIQVTALQAAVSTQLATPEEITELVLWQTYLVLMNRVVPDSPLDIVWPKKPEGGLS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA