| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170022879
Identifier: 170022879
GI number: 170022879
Start: 686639
End: 687436
Strand: Direct
Name: 170022879
Synonym: YPK_0628
Alternate gene names: NA
Gene position: 686639-687436 (Clockwise)
Preceding gene: 170022878
Following gene: 170022880
Centisome position: 14.64
GC content: 49.0
Gene sequence:
>798_bases ATGATAAATCCTAACATCGCTCACCTTCTTGGCATCTCACGAAAAACCACCGCAACAAAACAACCTACGACAAAAAAGGC AGGTTCATTGATGAAAAACTTCAGTCATTTATTTGGTACGCGCCTTAATGCCTCGGTGGATATTGTTGGTACTGATAAGC AGCAATCCAAGGCGGTTTCCATAGCAAAACCCAGCCAGCACAGTCGTGAGCACAATGTAGCCATTTCTGACGAGGCGAAA GCCAGCCCAGTACAGGCAATTCGATTACTCAAAGATACCGACCTGAGTTCATCGAAGATTAAAAAGCGACTGGCAGAAGA CCCGGAAGCATTAACCGTGTTCACTCAGAATTTCATGGAGCAACGTGATCCGACGTGGGAGCTTCAGGACGATGAAGAAA AGGCCATGACCGCGCTGACTTATTCTTCTGGGAACGGTGATACCAATGGCTATTTGGCAGCAAGGCAGAGGGCGACAAAA GCACTGGCCAAGATGGTGGAGCCAATGACCGAAGATGAAATTCAAGCCATGATTGAGCGTAATAGGCAGCGTATGAATGC GGCTGACCCTAATACCCCTGATAACGTCGAGGCACGTAAACAGGCTGAGGAAGAATTTAATCAGGAAATGGCCCATGCCA CAGCCCGCCGTAATGACCGGCTACGGGCTACAGGTGTCATGTTGCGTGGTGATGCAAAGCGCGTCAGTGGTGAAATAGTT GCGCCACACGGTGAAGTTACCAGCATTAAAGCGAATCTTGATGCGGGAATGAGTCCAGCAGCGTTAACTCGCCCCTAA
Upstream 100 bases:
>100_bases AATTGGTGTTGTGGCAAACCTACCTGGTACTGATGAACCGCGTCGTTCCTGATAGTCCTCTTGATATTGTTTGGCCGAAA AAGCCAGAGGGTGGACTGTC
Downstream 100 bases:
>100_bases GTCGAGCCGGGAGCCATTAGCATGAGTTATCAGCACTTATTCCCACAAGCTACAGCCCATACCGAGAATCGTCTCAGTGG CAGCCTGTTACGACTACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MINPNIAHLLGISRKTTATKQPTTKKAGSLMKNFSHLFGTRLNASVDIVGTDKQQSKAVSIAKPSQHSREHNVAISDEAK ASPVQAIRLLKDTDLSSSKIKKRLAEDPEALTVFTQNFMEQRDPTWELQDDEEKAMTALTYSSGNGDTNGYLAARQRATK ALAKMVEPMTEDEIQAMIERNRQRMNAADPNTPDNVEARKQAEEEFNQEMAHATARRNDRLRATGVMLRGDAKRVSGEIV APHGEVTSIKANLDAGMSPAALTRP
Sequences:
>Translated_265_residues MINPNIAHLLGISRKTTATKQPTTKKAGSLMKNFSHLFGTRLNASVDIVGTDKQQSKAVSIAKPSQHSREHNVAISDEAK ASPVQAIRLLKDTDLSSSKIKKRLAEDPEALTVFTQNFMEQRDPTWELQDDEEKAMTALTYSSGNGDTNGYLAARQRATK ALAKMVEPMTEDEIQAMIERNRQRMNAADPNTPDNVEARKQAEEEFNQEMAHATARRNDRLRATGVMLRGDAKRVSGEIV APHGEVTSIKANLDAGMSPAALTRP >Mature_265_residues MINPNIAHLLGISRKTTATKQPTTKKAGSLMKNFSHLFGTRLNASVDIVGTDKQQSKAVSIAKPSQHSREHNVAISDEAK ASPVQAIRLLKDTDLSSSKIKKRLAEDPEALTVFTQNFMEQRDPTWELQDDEEKAMTALTYSSGNGDTNGYLAARQRATK ALAKMVEPMTEDEIQAMIERNRQRMNAADPNTPDNVEARKQAEEEFNQEMAHATARRNDRLRATGVMLRGDAKRVSGEIV APHGEVTSIKANLDAGMSPAALTRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29149; Mature: 29149
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINPNIAHLLGISRKTTATKQPTTKKAGSLMKNFSHLFGTRLNASVDIVGTDKQQSKAVS CCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHCEEE IAKPSQHSREHNVAISDEAKASPVQAIRLLKDTDLSSSKIKKRLAEDPEALTVFTQNFME ECCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHH QRDPTWELQDDEEKAMTALTYSSGNGDTNGYLAARQRATKALAKMVEPMTEDEIQAMIER HCCCCCCCCCCHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH NRQRMNAADPNTPDNVEARKQAEEEFNQEMAHATARRNDRLRATGVMLRGDAKRVSGEIV HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHCCCEE APHGEVTSIKANLDAGMSPAALTRP CCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MINPNIAHLLGISRKTTATKQPTTKKAGSLMKNFSHLFGTRLNASVDIVGTDKQQSKAVS CCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHCEEE IAKPSQHSREHNVAISDEAKASPVQAIRLLKDTDLSSSKIKKRLAEDPEALTVFTQNFME ECCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHH QRDPTWELQDDEEKAMTALTYSSGNGDTNGYLAARQRATKALAKMVEPMTEDEIQAMIER HCCCCCCCCCCHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH NRQRMNAADPNTPDNVEARKQAEEEFNQEMAHATARRNDRLRATGVMLRGDAKRVSGEIV HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHCCCEE APHGEVTSIKANLDAGMSPAALTRP CCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA