| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022870
Identifier: 170022870
GI number: 170022870
Start: 680644
End: 681051
Strand: Direct
Name: 170022870
Synonym: YPK_0619
Alternate gene names: NA
Gene position: 680644-681051 (Clockwise)
Preceding gene: 170022869
Following gene: 170022871
Centisome position: 14.51
GC content: 49.75
Gene sequence:
>408_bases TTGTCCGACACCTTGCATCTACTATGTGTCCGACACCTTGATTATTTCCAAGGCGTAGAAACAGCGAAGCCCGGAAGTGT CTCACCACTAACCGGGCCTCTTACCACCAACGATAGAATAAGTATCGAGGTAGCGAAGAATAATATCACACCCGTAAGTG GGCGGACTGCTTATACCCTAAATACCGCACGTTCTAAATTCACCTGGTTGTTTATTGGCACCCCAACCAATACACCTAAC TGCACCCCCATTGTGTTACGTACCGAAGCTGACACAGAAACGGAAGCCCGTGCGCTTTTCCCCGCGTGGTCGCTGACCTT TGCTGCAAAAATCCGTACTGAGTGTTCCGTAACTGACCATCGCAGTGGCGTAGTTGTGTTTGACTTAATGGAGGTGCGCC ATGTCTAG
Upstream 100 bases:
>100_bases TTTTGATTTTGCATTTACAGATTTTGTCGCCATCACTGGTTTTCCTGTTTATTAGTGTCCGACAATAATACATGTTTTTT TCTGCATTGAAAGTGTTGAC
Downstream 100 bases:
>100_bases ACACGAGACTAATGAGCTGATGGATATTCTCCTGAAGGCGCAAAAAGCCAGTGCAATAATTCGGGCGCTTAATTACTCAT GGATTGAACTACCGGGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSDTLHLLCVRHLDYFQGVETAKPGSVSPLTGPLTTNDRISIEVAKNNITPVSGRTAYTLNTARSKFTWLFIGTPTNTPN CTPIVLRTEADTETEARALFPAWSLTFAAKIRTECSVTDHRSGVVVFDLMEVRHV
Sequences:
>Translated_135_residues MSDTLHLLCVRHLDYFQGVETAKPGSVSPLTGPLTTNDRISIEVAKNNITPVSGRTAYTLNTARSKFTWLFIGTPTNTPN CTPIVLRTEADTETEARALFPAWSLTFAAKIRTECSVTDHRSGVVVFDLMEVRHV >Mature_134_residues SDTLHLLCVRHLDYFQGVETAKPGSVSPLTGPLTTNDRISIEVAKNNITPVSGRTAYTLNTARSKFTWLFIGTPTNTPNC TPIVLRTEADTETEARALFPAWSLTFAAKIRTECSVTDHRSGVVVFDLMEVRHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14908; Mature: 14777
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTLHLLCVRHLDYFQGVETAKPGSVSPLTGPLTTNDRISIEVAKNNITPVSGRTAYTL CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEE NTARSKFTWLFIGTPTNTPNCTPIVLRTEADTETEARALFPAWSLTFAAKIRTECSVTDH ECCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEEEEEECCCCCC RSGVVVFDLMEVRHV CCCEEEEEEEEECCC >Mature Secondary Structure SDTLHLLCVRHLDYFQGVETAKPGSVSPLTGPLTTNDRISIEVAKNNITPVSGRTAYTL CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEE NTARSKFTWLFIGTPTNTPNCTPIVLRTEADTETEARALFPAWSLTFAAKIRTECSVTDH ECCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEEEEEECCCCCC RSGVVVFDLMEVRHV CCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA