| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022869
Identifier: 170022869
GI number: 170022869
Start: 679966
End: 680598
Strand: Direct
Name: 170022869
Synonym: YPK_0618
Alternate gene names: NA
Gene position: 679966-680598 (Clockwise)
Preceding gene: 170022868
Following gene: 170022870
Centisome position: 14.5
GC content: 44.87
Gene sequence:
>633_bases ATGCTGAATAAAACAAAAGCGGCCCTGCAAGGCCGCCAATGTAACTACAAAAAACTTAAGCCAAGCCAGATTACCACACT GATCGATCAGGTCAATAACCTTGGGCGAGTAGAGGGATGTGACAAAAAGTGCATCGATTATAAGTTAACCGCGCCATTGG CGCAGTTAATTCGATATGCGCGCATATCTGCTCACACCGTTCTTAACTGCGGGAAACTCACCGTATTACCCAGCGTAATA TTGCGCCCACTGATTTCATTGGCTTTCTCACAATCAAAATCATTCGCTACCTGGTGGGTATGTCCAGATCTGGATAGACC CCAACCTATTGATATGTCGGATTTCCCTCAATGGGGGAAGTCTACGCCAATGGCTGACACCCTAAGGAAATCCAGCTTAG CCAGAGATGGAATTCCCTCTCTGGAACAAAATCAATCTGTTAGCTTTGCTTTCTTGCGCTGGCGGCGTTTGATTTCGCCT TGCAAAGCAGATACTACAAATTGTCCGATGCTTTCGCCTTCCTCTTTGAGTTCTTCAACTGAGTTGGCAATATCGTGTGG GACACGAACATCAAATCTTTTTGATTTTGCATTTACAGATTTTGTCGCCATCACTGGTTTTCCTGTTTATTAG
Upstream 100 bases:
>100_bases TGCACTTTGCTTGATCTGGATACACCTACCACAACTCGCAAATTAAAGCTCACCGAACTAGCGCAACGCTGGCTGGCCAA ACGTCTGTTGGAGGTATCGG
Downstream 100 bases:
>100_bases TGTCCGACAATAATACATGTTTTTTTCTGCATTGAAAGTGTTGACTTGTCCGACACCTTGCATCTACTATGTGTCCGACA CCTTGATTATTTCCAAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MLNKTKAALQGRQCNYKKLKPSQITTLIDQVNNLGRVEGCDKKCIDYKLTAPLAQLIRYARISAHTVLNCGKLTVLPSVI LRPLISLAFSQSKSFATWWVCPDLDRPQPIDMSDFPQWGKSTPMADTLRKSSLARDGIPSLEQNQSVSFAFLRWRRLISP CKADTTNCPMLSPSSLSSSTELAISCGTRTSNLFDFAFTDFVAITGFPVY
Sequences:
>Translated_210_residues MLNKTKAALQGRQCNYKKLKPSQITTLIDQVNNLGRVEGCDKKCIDYKLTAPLAQLIRYARISAHTVLNCGKLTVLPSVI LRPLISLAFSQSKSFATWWVCPDLDRPQPIDMSDFPQWGKSTPMADTLRKSSLARDGIPSLEQNQSVSFAFLRWRRLISP CKADTTNCPMLSPSSLSSSTELAISCGTRTSNLFDFAFTDFVAITGFPVY >Mature_210_residues MLNKTKAALQGRQCNYKKLKPSQITTLIDQVNNLGRVEGCDKKCIDYKLTAPLAQLIRYARISAHTVLNCGKLTVLPSVI LRPLISLAFSQSKSFATWWVCPDLDRPQPIDMSDFPQWGKSTPMADTLRKSSLARDGIPSLEQNQSVSFAFLRWRRLISP CKADTTNCPMLSPSSLSSSTELAISCGTRTSNLFDFAFTDFVAITGFPVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23346; Mature: 23346
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNKTKAALQGRQCNYKKLKPSQITTLIDQVNNLGRVEGCDKKCIDYKLTAPLAQLIRYA CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCEEHHHHHHHHHHHH RISAHTVLNCGKLTVLPSVILRPLISLAFSQSKSFATWWVCPDLDRPQPIDMSDFPQWGK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCC STPMADTLRKSSLARDGIPSLEQNQSVSFAFLRWRRLISPCKADTTNCPMLSPSSLSSST CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC ELAISCGTRTSNLFDFAFTDFVAITGFPVY EEEEEECCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLNKTKAALQGRQCNYKKLKPSQITTLIDQVNNLGRVEGCDKKCIDYKLTAPLAQLIRYA CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCEEHHHHHHHHHHHH RISAHTVLNCGKLTVLPSVILRPLISLAFSQSKSFATWWVCPDLDRPQPIDMSDFPQWGK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCC STPMADTLRKSSLARDGIPSLEQNQSVSFAFLRWRRLISPCKADTTNCPMLSPSSLSSST CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC ELAISCGTRTSNLFDFAFTDFVAITGFPVY EEEEEECCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA