| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022866
Identifier: 170022866
GI number: 170022866
Start: 678089
End: 678817
Strand: Direct
Name: 170022866
Synonym: YPK_0615
Alternate gene names: NA
Gene position: 678089-678817 (Clockwise)
Preceding gene: 170022865
Following gene: 170022867
Centisome position: 14.46
GC content: 31.55
Gene sequence:
>729_bases ATGGATATCAAGAATGAAGACGGTGGCAAATTATGGATGATGGAATTTGTTGGGGAACTCTTACATTATGGGTTGGATGA ATCGGACCTTGATATTTTCGATAGAGTAGAATTGTTATCTAATGAAAATCCTAATAAGAGAAGCTTTCTTGAACGGATAA TAAACTATTTTGATCGAGTTGATGAGCCATTTGATGAGTTAATGGAAATTATTGAATTTAGCATTCCATATGAAAGTGTG GGTATAGAAGAAAGAGTGAAAATTATAGGGAAGATGGATAAAAGAGGATTTTCATTTATTTCTGATTTAGTTATCGAAGA TAATGATTTTAATCTTTTAAATTCGGCATGTATATTATATATGGTGGGCGCAAGAAATAATGCCAATGCTATTATTAAAA TAGCTATTAAATCAATAATAAAAAATGCATTTACTCCAATAATTAAAAGGATGGAAATAAATAAAGAAATTAAGTTGGCT ATTTCAAAGTCACAGAGTGAAAAAGCCTCTAAAAAAAGAAATTATTACTATGATGAGGTTTTTTCTGTAATAAAGCTAAC TTGGGAAAAATATCCATGCGCAAGCAAAACAGGAATTATTGATGCTTTAGCTCTTCACTATAAAGGAAAAGCCAGTCGAG GAGCTATTACCACTTGGATAGATGAGTCAGGACTAAGACCACCCAAACCAGATAAGTATACTCGTTTTGAATTAGTTTTC CCCCAATAG
Upstream 100 bases:
>100_bases CTCATTTATTATCAGCATTGGCGAATATGAGTGATGAAGAAAAACGACGTTTATTATTTTCCTTGTCAGAATATAATCAA AATAATGGGAATTTAAATTA
Downstream 100 bases:
>100_bases CCAGCTATTGAGGGGGAATTACCGGATGAAGCCCCTAATTATCCAGTTAAATAGGGGTTGTAGCCAGCTAATACGCTTTT TTTAGAAATCACGCCAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MDIKNEDGGKLWMMEFVGELLHYGLDESDLDIFDRVELLSNENPNKRSFLERIINYFDRVDEPFDELMEIIEFSIPYESV GIEERVKIIGKMDKRGFSFISDLVIEDNDFNLLNSACILYMVGARNNANAIIKIAIKSIIKNAFTPIIKRMEINKEIKLA ISKSQSEKASKKRNYYYDEVFSVIKLTWEKYPCASKTGIIDALALHYKGKASRGAITTWIDESGLRPPKPDKYTRFELVF PQ
Sequences:
>Translated_242_residues MDIKNEDGGKLWMMEFVGELLHYGLDESDLDIFDRVELLSNENPNKRSFLERIINYFDRVDEPFDELMEIIEFSIPYESV GIEERVKIIGKMDKRGFSFISDLVIEDNDFNLLNSACILYMVGARNNANAIIKIAIKSIIKNAFTPIIKRMEINKEIKLA ISKSQSEKASKKRNYYYDEVFSVIKLTWEKYPCASKTGIIDALALHYKGKASRGAITTWIDESGLRPPKPDKYTRFELVF PQ >Mature_242_residues MDIKNEDGGKLWMMEFVGELLHYGLDESDLDIFDRVELLSNENPNKRSFLERIINYFDRVDEPFDELMEIIEFSIPYESV GIEERVKIIGKMDKRGFSFISDLVIEDNDFNLLNSACILYMVGARNNANAIIKIAIKSIIKNAFTPIIKRMEINKEIKLA ISKSQSEKASKKRNYYYDEVFSVIKLTWEKYPCASKTGIIDALALHYKGKASRGAITTWIDESGLRPPKPDKYTRFELVF PQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27987; Mature: 27987
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIKNEDGGKLWMMEFVGELLHYGLDESDLDIFDRVELLSNENPNKRSFLERIINYFDRV CCCCCCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC DEPFDELMEIIEFSIPYESVGIEERVKIIGKMDKRGFSFISDLVIEDNDFNLLNSACILY CCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEE MVGARNNANAIIKIAIKSIIKNAFTPIIKRMEINKEIKLAISKSQSEKASKKRNYYYDEV EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHH FSVIKLTWEKYPCASKTGIIDALALHYKGKASRGAITTWIDESGLRPPKPDKYTRFELVF HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEC PQ CC >Mature Secondary Structure MDIKNEDGGKLWMMEFVGELLHYGLDESDLDIFDRVELLSNENPNKRSFLERIINYFDRV CCCCCCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC DEPFDELMEIIEFSIPYESVGIEERVKIIGKMDKRGFSFISDLVIEDNDFNLLNSACILY CCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEE MVGARNNANAIIKIAIKSIIKNAFTPIIKRMEINKEIKLAISKSQSEKASKKRNYYYDEV EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHH FSVIKLTWEKYPCASKTGIIDALALHYKGKASRGAITTWIDESGLRPPKPDKYTRFELVF HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEC PQ CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA