| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170022862
Identifier: 170022862
GI number: 170022862
Start: 674534
End: 675064
Strand: Direct
Name: 170022862
Synonym: YPK_0611
Alternate gene names: NA
Gene position: 674534-675064 (Clockwise)
Preceding gene: 170022861
Following gene: 170022863
Centisome position: 14.38
GC content: 36.72
Gene sequence:
>531_bases ATGATTGAAATTAAAACACTACTTGAACATGATAATGTTAAAGAACTGACTAAATATGTTGATGAGATTTATTCTATTTC TCGCTCCTTAGCTAAATATGGCGTTGAGGCGTGTTCTGGCCTAAAAGATCCCGGTTCAGTCAACATAACCGAAGCAATGC AGGTATTAATCAAAATGGGGGGGCAAACCTTCGCAAATGAATACCTGAGATTTCTCTATTTTCTTAATGGTTTTAGCCTT AATGGCACCACTATGTACGGTATTTTTTCTGATGAACAAAATATTCGTGATATCCGTAGAGCCAGAGCTAACCTGCATGA AGTACCAGAGCTTTATCCTGTAGAATTTGATGACTATGTTTTCATTGGGCATAACGAAACTGATGTTGTTATTTTTAATC AGATTAGTGAAAAATTTGAGCTACGTGATCGTATCGGTACAGTAGATACTCTTTGGGATAGTTTTGACGATATACCTAGT TTATTGAAGGTACTTATCGACAATCTTCGGCCAGCCCCTGATATTGAATGA
Upstream 100 bases:
>100_bases CTAATGCGCAAAAGAAAATCACTAACGGATTGCCACACGAGGCTTCGAAAGAAGTGCTTTGGCCGATTCCTCAAGGTCTT GTTTACCCATAGAGATTATT
Downstream 100 bases:
>100_bases ATAGTGTAATTATATGCGCAATATTGTTGATGACCTGAGTCGTGTTGGGAAAATATTAGGGTATATGATACACCCTAAAT TCACGGGACATGTGGAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MIEIKTLLEHDNVKELTKYVDEIYSISRSLAKYGVEACSGLKDPGSVNITEAMQVLIKMGGQTFANEYLRFLYFLNGFSL NGTTMYGIFSDEQNIRDIRRARANLHEVPELYPVEFDDYVFIGHNETDVVIFNQISEKFELRDRIGTVDTLWDSFDDIPS LLKVLIDNLRPAPDIE
Sequences:
>Translated_176_residues MIEIKTLLEHDNVKELTKYVDEIYSISRSLAKYGVEACSGLKDPGSVNITEAMQVLIKMGGQTFANEYLRFLYFLNGFSL NGTTMYGIFSDEQNIRDIRRARANLHEVPELYPVEFDDYVFIGHNETDVVIFNQISEKFELRDRIGTVDTLWDSFDDIPS LLKVLIDNLRPAPDIE >Mature_176_residues MIEIKTLLEHDNVKELTKYVDEIYSISRSLAKYGVEACSGLKDPGSVNITEAMQVLIKMGGQTFANEYLRFLYFLNGFSL NGTTMYGIFSDEQNIRDIRRARANLHEVPELYPVEFDDYVFIGHNETDVVIFNQISEKFELRDRIGTVDTLWDSFDDIPS LLKVLIDNLRPAPDIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20237; Mature: 20237
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEIKTLLEHDNVKELTKYVDEIYSISRSLAKYGVEACSGLKDPGSVNITEAMQVLIKMG CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC GQTFANEYLRFLYFLNGFSLNGTTMYGIFSDEQNIRDIRRARANLHEVPELYPVEFDDYV CHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEE FIGHNETDVVIFNQISEKFELRDRIGTVDTLWDSFDDIPSLLKVLIDNLRPAPDIE EEECCCCCEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIEIKTLLEHDNVKELTKYVDEIYSISRSLAKYGVEACSGLKDPGSVNITEAMQVLIKMG CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC GQTFANEYLRFLYFLNGFSLNGTTMYGIFSDEQNIRDIRRARANLHEVPELYPVEFDDYV CHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEE FIGHNETDVVIFNQISEKFELRDRIGTVDTLWDSFDDIPSLLKVLIDNLRPAPDIE EEECCCCCEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA