| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022863
Identifier: 170022863
GI number: 170022863
Start: 675078
End: 675551
Strand: Direct
Name: 170022863
Synonym: YPK_0612
Alternate gene names: NA
Gene position: 675078-675551 (Clockwise)
Preceding gene: 170022862
Following gene: 170022864
Centisome position: 14.4
GC content: 38.19
Gene sequence:
>474_bases ATGCGCAATATTGTTGATGACCTGAGTCGTGTTGGGAAAATATTAGGGTATATGATACACCCTAAATTCACGGGACATGT GGAACAACATGACTTCGGGCGTGGTATTGGTGCTGTACAACCAGATTTTTGGGATCAGTATTTAGAGTTTGTTTCTCTAA TGGATGGTTTCATTATTGATGGATATTCTGTTTACGGTTTATCTAACTATGATGAAGTACATAACGAATTATTTGAATAT AACGATGAACAAACCAATATCCTCCGCGAAGCGCCTGAATTAGTTGTCGATGAAATAAACTACCTAATATTTATAGGCTC AACAGGGACCGACTCGTTTGTTTATGACGTTCGGACCCATAAATGGGAGGTTCGTGATCGTATCGCTATTGATGAAGCAT ACGAATCATTTGATTCTTTAGTCGAGTTTCTTGCTGCACAACTGGCTCGAATTAAAGCAGATAATGATTTATAG
Upstream 100 bases:
>100_bases GATACTCTTTGGGATAGTTTTGACGATATACCTAGTTTATTGAAGGTACTTATCGACAATCTTCGGCCAGCCCCTGATAT TGAATGAATAGTGTAATTAT
Downstream 100 bases:
>100_bases ATGCATATAGTAAACTGAGCAATTCAGGCCAGTTAAACCTTAAGGGGTCGAAATGACGCTTACAGAAGAACAGAAGGCGC TTTTCGATGCCCTGACGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRNIVDDLSRVGKILGYMIHPKFTGHVEQHDFGRGIGAVQPDFWDQYLEFVSLMDGFIIDGYSVYGLSNYDEVHNELFEY NDEQTNILREAPELVVDEINYLIFIGSTGTDSFVYDVRTHKWEVRDRIAIDEAYESFDSLVEFLAAQLARIKADNDL
Sequences:
>Translated_157_residues MRNIVDDLSRVGKILGYMIHPKFTGHVEQHDFGRGIGAVQPDFWDQYLEFVSLMDGFIIDGYSVYGLSNYDEVHNELFEY NDEQTNILREAPELVVDEINYLIFIGSTGTDSFVYDVRTHKWEVRDRIAIDEAYESFDSLVEFLAAQLARIKADNDL >Mature_157_residues MRNIVDDLSRVGKILGYMIHPKFTGHVEQHDFGRGIGAVQPDFWDQYLEFVSLMDGFIIDGYSVYGLSNYDEVHNELFEY NDEQTNILREAPELVVDEINYLIFIGSTGTDSFVYDVRTHKWEVRDRIAIDEAYESFDSLVEFLAAQLARIKADNDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18167; Mature: 18167
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNIVDDLSRVGKILGYMIHPKFTGHVEQHDFGRGIGAVQPDFWDQYLEFVSLMDGFIID CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHCC GYSVYGLSNYDEVHNELFEYNDEQTNILREAPELVVDEINYLIFIGSTGTDSFVYDVRTH CEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEHHHC KWEVRDRIAIDEAYESFDSLVEFLAAQLARIKADNDL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRNIVDDLSRVGKILGYMIHPKFTGHVEQHDFGRGIGAVQPDFWDQYLEFVSLMDGFIID CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHCC GYSVYGLSNYDEVHNELFEYNDEQTNILREAPELVVDEINYLIFIGSTGTDSFVYDVRTH CEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEHHHC KWEVRDRIAIDEAYESFDSLVEFLAAQLARIKADNDL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA