Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is 170022863

Identifier: 170022863

GI number: 170022863

Start: 675078

End: 675551

Strand: Direct

Name: 170022863

Synonym: YPK_0612

Alternate gene names: NA

Gene position: 675078-675551 (Clockwise)

Preceding gene: 170022862

Following gene: 170022864

Centisome position: 14.4

GC content: 38.19

Gene sequence:

>474_bases
ATGCGCAATATTGTTGATGACCTGAGTCGTGTTGGGAAAATATTAGGGTATATGATACACCCTAAATTCACGGGACATGT
GGAACAACATGACTTCGGGCGTGGTATTGGTGCTGTACAACCAGATTTTTGGGATCAGTATTTAGAGTTTGTTTCTCTAA
TGGATGGTTTCATTATTGATGGATATTCTGTTTACGGTTTATCTAACTATGATGAAGTACATAACGAATTATTTGAATAT
AACGATGAACAAACCAATATCCTCCGCGAAGCGCCTGAATTAGTTGTCGATGAAATAAACTACCTAATATTTATAGGCTC
AACAGGGACCGACTCGTTTGTTTATGACGTTCGGACCCATAAATGGGAGGTTCGTGATCGTATCGCTATTGATGAAGCAT
ACGAATCATTTGATTCTTTAGTCGAGTTTCTTGCTGCACAACTGGCTCGAATTAAAGCAGATAATGATTTATAG

Upstream 100 bases:

>100_bases
GATACTCTTTGGGATAGTTTTGACGATATACCTAGTTTATTGAAGGTACTTATCGACAATCTTCGGCCAGCCCCTGATAT
TGAATGAATAGTGTAATTAT

Downstream 100 bases:

>100_bases
ATGCATATAGTAAACTGAGCAATTCAGGCCAGTTAAACCTTAAGGGGTCGAAATGACGCTTACAGAAGAACAGAAGGCGC
TTTTCGATGCCCTGACGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MRNIVDDLSRVGKILGYMIHPKFTGHVEQHDFGRGIGAVQPDFWDQYLEFVSLMDGFIIDGYSVYGLSNYDEVHNELFEY
NDEQTNILREAPELVVDEINYLIFIGSTGTDSFVYDVRTHKWEVRDRIAIDEAYESFDSLVEFLAAQLARIKADNDL

Sequences:

>Translated_157_residues
MRNIVDDLSRVGKILGYMIHPKFTGHVEQHDFGRGIGAVQPDFWDQYLEFVSLMDGFIIDGYSVYGLSNYDEVHNELFEY
NDEQTNILREAPELVVDEINYLIFIGSTGTDSFVYDVRTHKWEVRDRIAIDEAYESFDSLVEFLAAQLARIKADNDL
>Mature_157_residues
MRNIVDDLSRVGKILGYMIHPKFTGHVEQHDFGRGIGAVQPDFWDQYLEFVSLMDGFIIDGYSVYGLSNYDEVHNELFEY
NDEQTNILREAPELVVDEINYLIFIGSTGTDSFVYDVRTHKWEVRDRIAIDEAYESFDSLVEFLAAQLARIKADNDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18167; Mature: 18167

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNIVDDLSRVGKILGYMIHPKFTGHVEQHDFGRGIGAVQPDFWDQYLEFVSLMDGFIID
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHCC
GYSVYGLSNYDEVHNELFEYNDEQTNILREAPELVVDEINYLIFIGSTGTDSFVYDVRTH
CEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEHHHC
KWEVRDRIAIDEAYESFDSLVEFLAAQLARIKADNDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRNIVDDLSRVGKILGYMIHPKFTGHVEQHDFGRGIGAVQPDFWDQYLEFVSLMDGFIID
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHCC
GYSVYGLSNYDEVHNELFEYNDEQTNILREAPELVVDEINYLIFIGSTGTDSFVYDVRTH
CEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEHHHC
KWEVRDRIAIDEAYESFDSLVEFLAAQLARIKADNDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA