| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022523
Identifier: 170022523
GI number: 170022523
Start: 301543
End: 302523
Strand: Reverse
Name: 170022523
Synonym: YPK_0262
Alternate gene names: NA
Gene position: 302523-301543 (Counterclockwise)
Preceding gene: 170022524
Following gene: 170022517
Centisome position: 6.45
GC content: 51.78
Gene sequence:
>981_bases ATGCAGCGCATCTTGGTGATCCGAATTGATTTTCTCGGCGATATGGTTTGTACCACGGCGCTATTACATGCGCTGAAACA ACGTTGGCCAGCAGCAGAAATCCACGTATTAGCGAATAAATATAATCAATCCGTGCTGGCACGTAATCCTGATGTCAGTG CGGTCCACACTTATGTTTACAGCAAACAATGTGAGAGAAACCAGCGGCCAGGCCGGCTCATGGCCCTTTTTGATCGGCTA GCATTAATTTGGCGGCTACGGCGTTTAGGCTTCGATCTGCTGCTCATTCCCAATGGTGGCATGAACAAAAACAGTATTCA GTTTGCCAAACAGCTCAATGTGGCAGATCGCCGTTGGCATACGGCTGAAACTGAGTTTGACGACCGTAATCCTGAACATG TTGCCACGCGGCCAATCCGTCACGAAGCCCTCTCGGGATTTGCACTGATGCCTGAACTGGGGCGGGTAGACATCGAAACA CTTAAGCTGCATGTCTACCCAGAGCCACAATTGCAGGCAAAATGGCGGGCCGATCTTGGGGAAAAAGACCGGCCACGTGT CGGGCTATTTATCTCTAATAAATCCGCCCAACGGCGCTGGAGTTGGGATAAGTGGCGTCAATTGGCATTGAAACTCAATG CACAGGCTGAATTGCTCATTTTTCATGATCCAGCAGAACAACCATCCGAGCAGCAATTAGCGGGGCTAACCGCCCGTTGT CTGTCAACGCCATCCACTGACGACCTGATGGCGGCGATGAGCCAGTTGGATTTGGTGATTTCCGCCGACAGCGCACCGGT ACATATCGGCTCCGCATTACAAATACCCGTGGTGGCCTTGTTTGAATCCCGGCCAGAGAAGTACCTACGCTGGTATCCGC TAGGTGTTCGCCATGTGCTCGTCCATGCCGGGCCACAAGTTGAAGACATCCATGTTGATGCTGTCGAGTCTGCCGCCCGT TCACTGTTGACCACAGATTAA
Upstream 100 bases:
>100_bases CTGAATAAATAAGTTACAAATACTTATTCATTACACTGTATTTCCCTGGCACATATAAGGTTTAATTAAGCCCTGAAGCA ATTAATGTGAATGGACTTAA
Downstream 100 bases:
>100_bases TAACGCCATAGATCAGGGCCGGAACACCGGCCTATCACCCAGAATCGTCGCCCGATGCATCACCCGCCGCTGCGGTAGGT AGTCGGCATTGGCGTAATGC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Sugar Transferase; Heptosyliii Transferase; ADP-Heptose; Lipopolysaccharide Heptosyltransferase III; Heptosyl Transferase; Family 9 Glycosyl Transferase
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MQRILVIRIDFLGDMVCTTALLHALKQRWPAAEIHVLANKYNQSVLARNPDVSAVHTYVYSKQCERNQRPGRLMALFDRL ALIWRLRRLGFDLLLIPNGGMNKNSIQFAKQLNVADRRWHTAETEFDDRNPEHVATRPIRHEALSGFALMPELGRVDIET LKLHVYPEPQLQAKWRADLGEKDRPRVGLFISNKSAQRRWSWDKWRQLALKLNAQAELLIFHDPAEQPSEQQLAGLTARC LSTPSTDDLMAAMSQLDLVISADSAPVHIGSALQIPVVALFESRPEKYLRWYPLGVRHVLVHAGPQVEDIHVDAVESAAR SLLTTD
Sequences:
>Translated_326_residues MQRILVIRIDFLGDMVCTTALLHALKQRWPAAEIHVLANKYNQSVLARNPDVSAVHTYVYSKQCERNQRPGRLMALFDRL ALIWRLRRLGFDLLLIPNGGMNKNSIQFAKQLNVADRRWHTAETEFDDRNPEHVATRPIRHEALSGFALMPELGRVDIET LKLHVYPEPQLQAKWRADLGEKDRPRVGLFISNKSAQRRWSWDKWRQLALKLNAQAELLIFHDPAEQPSEQQLAGLTARC LSTPSTDDLMAAMSQLDLVISADSAPVHIGSALQIPVVALFESRPEKYLRWYPLGVRHVLVHAGPQVEDIHVDAVESAAR SLLTTD >Mature_326_residues MQRILVIRIDFLGDMVCTTALLHALKQRWPAAEIHVLANKYNQSVLARNPDVSAVHTYVYSKQCERNQRPGRLMALFDRL ALIWRLRRLGFDLLLIPNGGMNKNSIQFAKQLNVADRRWHTAETEFDDRNPEHVATRPIRHEALSGFALMPELGRVDIET LKLHVYPEPQLQAKWRADLGEKDRPRVGLFISNKSAQRRWSWDKWRQLALKLNAQAELLIFHDPAEQPSEQQLAGLTARC LSTPSTDDLMAAMSQLDLVISADSAPVHIGSALQIPVVALFESRPEKYLRWYPLGVRHVLVHAGPQVEDIHVDAVESAAR SLLTTD
Specific function: Unknown
COG id: COG0859
COG function: function code M; ADP-heptose:LPS heptosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37086; Mature: 37086
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRILVIRIDFLGDMVCTTALLHALKQRWPAAEIHVLANKYNQSVLARNPDVSAVHTYVY CCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHCCHHCCCCCCHHHHHHHHH SKQCERNQRPGRLMALFDRLALIWRLRRLGFDLLLIPNGGMNKNSIQFAKQLNVADRRWH HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCHHHHCCC TAETEFDDRNPEHVATRPIRHEALSGFALMPELGRVDIETLKLHVYPEPQLQAKWRADLG CCCCCCCCCCCCHHHCCCHHHHHHCCEEECCCCCCCEEEEEEEEECCCCCCCHHHHCCCC EKDRPRVGLFISNKSAQRRWSWDKWRQLALKLNAQAELLIFHDPAEQPSEQQLAGLTARC CCCCCEEEEEEECCCCHHCCCHHHHHHHHHEECCCEEEEEEECCCCCCCHHHHHHHHHHH LSTPSTDDLMAAMSQLDLVISADSAPVHIGSALQIPVVALFESRPEKYLRWYPLGVRHVL HCCCCHHHHHHHHHHCEEEEECCCCCEEECCCCCCHHHEEHHCCCHHHHEEECCCCEEEE VHAGPQVEDIHVDAVESAARSLLTTD EECCCCEEEEEHHHHHHHHHHHHCCC >Mature Secondary Structure MQRILVIRIDFLGDMVCTTALLHALKQRWPAAEIHVLANKYNQSVLARNPDVSAVHTYVY CCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHCCHHCCCCCCHHHHHHHHH SKQCERNQRPGRLMALFDRLALIWRLRRLGFDLLLIPNGGMNKNSIQFAKQLNVADRRWH HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCHHHHCCC TAETEFDDRNPEHVATRPIRHEALSGFALMPELGRVDIETLKLHVYPEPQLQAKWRADLG CCCCCCCCCCCCHHHCCCHHHHHHCCEEECCCCCCCEEEEEEEEECCCCCCCHHHHCCCC EKDRPRVGLFISNKSAQRRWSWDKWRQLALKLNAQAELLIFHDPAEQPSEQQLAGLTARC CCCCCEEEEEEECCCCHHCCCHHHHHHHHHEECCCEEEEEEECCCCCCCHHHHHHHHHHH LSTPSTDDLMAAMSQLDLVISADSAPVHIGSALQIPVVALFESRPEKYLRWYPLGVRHVL HCCCCHHHHHHHHHHCEEEEECCCCCEEECCCCCCHHHEEHHCCCHHHHEEECCCCEEEE VHAGPQVEDIHVDAVESAARSLLTTD EECCCCEEEEEHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA