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The map label for this gene is yibD [H]

Identifier: 170022524

GI number: 170022524

Start: 302616

End: 303641

Strand: Reverse

Name: yibD [H]

Synonym: YPK_0263

Alternate gene names: 170022524

Gene position: 303641-302616 (Counterclockwise)

Preceding gene: 170022525

Following gene: 170022523

Centisome position: 6.47

GC content: 48.93

Gene sequence:

>1026_bases
ATGAACAGCGTTGATATCAGCGTCATTGTCCCCGTATACAATTGCGCAAATTATCTTACGGATCTGCTCGACTCACTGCG
CAGCCAAACGGGCGTCTCGCTTGAGATTATTGCCGTTAACGATGGCTCTACCGATCACAGTCTCGCACTACTGGAACAGG
TTGCTCATATTGATTCCCGATTAGTGATTATAAATCAGCAGAATCAGGGGCTTTCTGAGGCCCGCAATGTGGGGATCGCC
AAGGCGAAAGGCAATTGGGTTGCCTTTGCCGATGGTGATGATTGGCTGGCACCCCATGCCCTGTCAACTTGGTTACAGCA
GGTTAAACAGCAGAAGCTGGATGTCTTGATTGGTAACGGCTATCAATTTAGCAGTAACCCCGAGCGAAAACCGGTCACCC
CCTTATTGGGTCAACAGCCTTGGGGAGCGACGCTCAATGGTCAACAATGGATTATCCTCAGTGTTAAACAAAATGGTCAA
CAATGGATTATCCTCAGTGTTAAACAAAAAGAGTGGCCACATTATGCCTGGTTGCAACTGATTCGCCGCGATGTGATCAG
CACTCACCAATTACAGTTTATTCGCGATATGCTTCATGAAGATATTCTGTGGACCACCCAATTAGCACTCGTGGCCCAAC
GCATCGGGTTCTGTGCCACGCCCTTCTATGGCTACCGTACTAATCCTGACTCAATCACTAACTCTCCCTCAATGCAGGCA
CTCCTACGCCGCGCCAGTAGCTACGTTGATATTATCAACGCACTGGTTAAGATTGCCGCCAGCACCAAACCACCGGTGCG
CAATGCCTTGCTATCTCATGCCAATCAAGAAAGTGGCCATCTTTTAGGGTTATTACGTAAAAAACTACCTGCCTCACCAC
AACGTACCGCATTGGCAATTCGCTTTATCACATTGGGTCTGCGCCCTGCACTATTCCGTGGTGTAACCAATCTCCATGAA
CTCTGGCGAGCAATACGTTGCTCATTCTTGATGGGTTCCTATGCCCGGCAAAAGCGCGCTGAATAA

Upstream 100 bases:

>100_bases
ATATGGCATCGTGAATATAGTCGTGCGAATTGAGTTAGAGTCGCACGACTAGAGCGGCGTGATTTTTCGCGGTCTTATCA
CGCCCAGAGATTAAACAATC

Downstream 100 bases:

>100_bases
ATAAGTTACAAATACTTATTCATTACACTGTATTTCCCTGGCACATATAAGGTTTAATTAAGCCCTGAAGCAATTAATGT
GAATGGACTTAAATGCAGCG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MNSVDISVIVPVYNCANYLTDLLDSLRSQTGVSLEIIAVNDGSTDHSLALLEQVAHIDSRLVIINQQNQGLSEARNVGIA
KAKGNWVAFADGDDWLAPHALSTWLQQVKQQKLDVLIGNGYQFSSNPERKPVTPLLGQQPWGATLNGQQWIILSVKQNGQ
QWIILSVKQKEWPHYAWLQLIRRDVISTHQLQFIRDMLHEDILWTTQLALVAQRIGFCATPFYGYRTNPDSITNSPSMQA
LLRRASSYVDIINALVKIAASTKPPVRNALLSHANQESGHLLGLLRKKLPASPQRTALAIRFITLGLRPALFRGVTNLHE
LWRAIRCSFLMGSYARQKRAE

Sequences:

>Translated_341_residues
MNSVDISVIVPVYNCANYLTDLLDSLRSQTGVSLEIIAVNDGSTDHSLALLEQVAHIDSRLVIINQQNQGLSEARNVGIA
KAKGNWVAFADGDDWLAPHALSTWLQQVKQQKLDVLIGNGYQFSSNPERKPVTPLLGQQPWGATLNGQQWIILSVKQNGQ
QWIILSVKQKEWPHYAWLQLIRRDVISTHQLQFIRDMLHEDILWTTQLALVAQRIGFCATPFYGYRTNPDSITNSPSMQA
LLRRASSYVDIINALVKIAASTKPPVRNALLSHANQESGHLLGLLRKKLPASPQRTALAIRFITLGLRPALFRGVTNLHE
LWRAIRCSFLMGSYARQKRAE
>Mature_341_residues
MNSVDISVIVPVYNCANYLTDLLDSLRSQTGVSLEIIAVNDGSTDHSLALLEQVAHIDSRLVIINQQNQGLSEARNVGIA
KAKGNWVAFADGDDWLAPHALSTWLQQVKQQKLDVLIGNGYQFSSNPERKPVTPLLGQQPWGATLNGQQWIILSVKQNGQ
QWIILSVKQKEWPHYAWLQLIRRDVISTHQLQFIRDMLHEDILWTTQLALVAQRIGFCATPFYGYRTNPDSITNSPSMQA
LLRRASSYVDIINALVKIAASTKPPVRNALLSHANQESGHLLGLLRKKLPASPQRTALAIRFITLGLRPALFRGVTNLHE
LWRAIRCSFLMGSYARQKRAE

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=241, Percent_Identity=30.7053941908714, Blast_Score=125, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38224; Mature: 38224

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVDISVIVPVYNCANYLTDLLDSLRSQTGVSLEIIAVNDGSTDHSLALLEQVAHIDSR
CCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCE
LVIINQQNQGLSEARNVGIAKAKGNWVAFADGDDWLAPHALSTWLQQVKQQKLDVLIGNG
EEEEECCCCCHHHHHCCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEECC
YQFSSNPERKPVTPLLGQQPWGATLNGQQWIILSVKQNGQQWIILSVKQKEWPHYAWLQL
EEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHH
IRRDVISTHQLQFIRDMLHEDILWTTQLALVAQRIGFCATPFYGYRTNPDSITNSPSMQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
LLRRASSYVDIINALVKIAASTKPPVRNALLSHANQESGHLLGLLRKKLPASPQRTALAI
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHH
RFITLGLRPALFRGVTNLHELWRAIRCSFLMGSYARQKRAE
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSVDISVIVPVYNCANYLTDLLDSLRSQTGVSLEIIAVNDGSTDHSLALLEQVAHIDSR
CCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCE
LVIINQQNQGLSEARNVGIAKAKGNWVAFADGDDWLAPHALSTWLQQVKQQKLDVLIGNG
EEEEECCCCCHHHHHCCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEECC
YQFSSNPERKPVTPLLGQQPWGATLNGQQWIILSVKQNGQQWIILSVKQKEWPHYAWLQL
EEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHH
IRRDVISTHQLQFIRDMLHEDILWTTQLALVAQRIGFCATPFYGYRTNPDSITNSPSMQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
LLRRASSYVDIINALVKIAASTKPPVRNALLSHANQESGHLLGLLRKKLPASPQRTALAI
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHH
RFITLGLRPALFRGVTNLHELWRAIRCSFLMGSYARQKRAE
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2647748 [H]