Click here to switch to the map view.

The map label for this gene is yafU [C]

Identifier: 170022513

GI number: 170022513

Start: 293418

End: 294290

Strand: Direct

Name: yafU [C]

Synonym: YPK_0252

Alternate gene names: 170022513

Gene position: 293418-294290 (Clockwise)

Preceding gene: 170022512

Following gene: 170022514

Centisome position: 6.26

GC content: 31.39

Gene sequence:

>873_bases
ATGTCTAAATATAATCCTCATCTTAACATGGTTTTTGGTGGGACTATGGTTATTGATGAACATGATGGTAAGTTAAAACA
ATGGAATCAGACGGAAGAATATAAATATAAAGATTTGCAAAGACAACTTGATGAGAATCAAGAACATTATGCATTATTAA
CCATCGGTGAAGCTGAGTTTTTTCTAAAAAACATTAATGAACCTAATCTTAATCAATCATGGAAAAACACTATTTATTCT
TATTCTGATGTGATTTCATCTTTTTCGGGTAATATTTATGACGGTGCTGGCATCATAAAGATAGTGGATAAATTTAAAAG
TCATGGGCTTAGAGCTAAAGAGTTTATTGGTAAGGATGGTAATTCATATATAAAAATATCAGGATATGATGGTGTTAAGA
AGTATATAATAGTTACAAAAAACTCGATGAGTAATAAAAAACTATTATCAATGGGTGTTGGTAGTAAGAGTATGATAAAT
GGAATTGTAAATGGTGCTAAGTTTTGTGTGGTCTTTTCGCTAGCATATAGAGCGGTTGAGTTAATGTTAAAGGATGAATA
CGATCTTGTTGATTTTTTTGGTAATTTGACTATGGATGCTGCGAAGTTAGCTGTTTCAACTGGCGTTGCTTTTGGCGTAA
AATCAGCTGTAACCTCGACTTTACTTGCAGCTGGTACAAGTGTAATGGTTTTATCGATCGGTATATTTATATTAGGCATT
GGTGTGGCTTTCTTATTATATTATATCGATGATGAATTTGAAATAAGCCAAAAAATTATAGATTTTATAAGAAATAAAGA
TAGAGAAGTAAAATATTACTCACCTCATCCAGATGAAATATTTAATACTTGGGGGGTATACAGTCGTGGCTAA

Upstream 100 bases:

>100_bases
TATATGGGATGACCGAGTTTATTAGCTTTTTAATAGAGTATGCTGCAAGTTTCGCATGCTCTGTTTTTGGTTTCTTTAAA
TATTAATGGAGTTTAATGCG

Downstream 100 bases:

>100_bases
TAAAAACAAAATATCGGTTGCCTGTGGGGCGATATCATTGTTTGTTGTCGCCTCATTTTCTTTGTTTTTCTCATTAACTC
ATTATTTTAATTTTTTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSKYNPHLNMVFGGTMVIDEHDGKLKQWNQTEEYKYKDLQRQLDENQEHYALLTIGEAEFFLKNINEPNLNQSWKNTIYS
YSDVISSFSGNIYDGAGIIKIVDKFKSHGLRAKEFIGKDGNSYIKISGYDGVKKYIIVTKNSMSNKKLLSMGVGSKSMIN
GIVNGAKFCVVFSLAYRAVELMLKDEYDLVDFFGNLTMDAAKLAVSTGVAFGVKSAVTSTLLAAGTSVMVLSIGIFILGI
GVAFLLYYIDDEFEISQKIIDFIRNKDREVKYYSPHPDEIFNTWGVYSRG

Sequences:

>Translated_290_residues
MSKYNPHLNMVFGGTMVIDEHDGKLKQWNQTEEYKYKDLQRQLDENQEHYALLTIGEAEFFLKNINEPNLNQSWKNTIYS
YSDVISSFSGNIYDGAGIIKIVDKFKSHGLRAKEFIGKDGNSYIKISGYDGVKKYIIVTKNSMSNKKLLSMGVGSKSMIN
GIVNGAKFCVVFSLAYRAVELMLKDEYDLVDFFGNLTMDAAKLAVSTGVAFGVKSAVTSTLLAAGTSVMVLSIGIFILGI
GVAFLLYYIDDEFEISQKIIDFIRNKDREVKYYSPHPDEIFNTWGVYSRG
>Mature_289_residues
SKYNPHLNMVFGGTMVIDEHDGKLKQWNQTEEYKYKDLQRQLDENQEHYALLTIGEAEFFLKNINEPNLNQSWKNTIYSY
SDVISSFSGNIYDGAGIIKIVDKFKSHGLRAKEFIGKDGNSYIKISGYDGVKKYIIVTKNSMSNKKLLSMGVGSKSMING
IVNGAKFCVVFSLAYRAVELMLKDEYDLVDFFGNLTMDAAKLAVSTGVAFGVKSAVTSTLLAAGTSVMVLSIGIFILGIG
VAFLLYYIDDEFEISQKIIDFIRNKDREVKYYSPHPDEIFNTWGVYSRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32614; Mature: 32483

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKYNPHLNMVFGGTMVIDEHDGKLKQWNQTEEYKYKDLQRQLDENQEHYALLTIGEAEF
CCCCCCCEEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHH
FLKNINEPNLNQSWKNTIYSYSDVISSFSGNIYDGAGIIKIVDKFKSHGLRAKEFIGKDG
HHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCC
NSYIKISGYDGVKKYIIVTKNSMSNKKLLSMGVGSKSMINGIVNGAKFCVVFSLAYRAVE
CCEEEEECCCCCEEEEEEECCCCCCCHHEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHH
LMLKDEYDLVDFFGNLTMDAAKLAVSTGVAFGVKSAVTSTLLAAGTSVMVLSIGIFILGI
HHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GVAFLLYYIDDEFEISQKIIDFIRNKDREVKYYSPHPDEIFNTWGVYSRG
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
SKYNPHLNMVFGGTMVIDEHDGKLKQWNQTEEYKYKDLQRQLDENQEHYALLTIGEAEF
CCCCCCEEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHH
FLKNINEPNLNQSWKNTIYSYSDVISSFSGNIYDGAGIIKIVDKFKSHGLRAKEFIGKDG
HHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCC
NSYIKISGYDGVKKYIIVTKNSMSNKKLLSMGVGSKSMINGIVNGAKFCVVFSLAYRAVE
CCEEEEECCCCCEEEEEEECCCCCCCHHEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHH
LMLKDEYDLVDFFGNLTMDAAKLAVSTGVAFGVKSAVTSTLLAAGTSVMVLSIGIFILGI
HHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GVAFLLYYIDDEFEISQKIIDFIRNKDREVKYYSPHPDEIFNTWGVYSRG
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA