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The map label for this gene is yhhZ [H]

Identifier: 170022512

GI number: 170022512

Start: 292863

End: 293342

Strand: Direct

Name: yhhZ [H]

Synonym: YPK_0251

Alternate gene names: 170022512

Gene position: 292863-293342 (Clockwise)

Preceding gene: 170022511

Following gene: 170022513

Centisome position: 6.25

GC content: 34.17

Gene sequence:

>480_bases
ATGTCTTATATGATTTATTTAACTTTAAATGGCGAGCAACAAGGGCTTATCTCTGCAGGGTGCTCTTCTGTTGAATCGAT
TGGAAACAGATATCAATCGGGACATGAAGATCAAATCCAAGTATTAGGATTGAATCATAATATAACAAGAGAACAACATG
TATCACATCACCCGATTAATTTTACAAAGCCAATAGATAAGTCATCACCATTATTAACTGTATCAATATCAAATAATGAG
AAAGTAACTGCCAATTTTGTTTTTTATAGAGTAAATTCATCTGGCCAAATGGAAGTATTTTATGAAGTTAAATTGACCGG
GGCTAGTATTATTGATGTTTCATCGAGTTATCCCCATTCTATAAGTGATAATGAATCAATGCCATATGAGCGAGTGCTTC
TGAGATATGACTCTATAACAGTGGAGCACAAGTTAGCAGGTACTTCAGGTTATAGTATATGGGATGACCGAGTTTATTAG

Upstream 100 bases:

>100_bases
TTGAAACCAAAATTTCTGATGGTCTAAAGTTGACGTTCAGTCTTGAAAATAAATATATTACCCAATATTAGTATGTTGTT
ATCTTAAGGATTAATTGACT

Downstream 100 bases:

>100_bases
CTTTTTAATAGAGTATGCTGCAAGTTTCGCATGCTCTGTTTTTGGTTTCTTTAAATATTAATGGAGTTTAATGCGATGTC
TAAATATAATCCTCATCTTA

Product: Hcp1 family type VI secretion system effector

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSYMIYLTLNGEQQGLISAGCSSVESIGNRYQSGHEDQIQVLGLNHNITREQHVSHHPINFTKPIDKSSPLLTVSISNNE
KVTANFVFYRVNSSGQMEVFYEVKLTGASIIDVSSSYPHSISDNESMPYERVLLRYDSITVEHKLAGTSGYSIWDDRVY

Sequences:

>Translated_159_residues
MSYMIYLTLNGEQQGLISAGCSSVESIGNRYQSGHEDQIQVLGLNHNITREQHVSHHPINFTKPIDKSSPLLTVSISNNE
KVTANFVFYRVNSSGQMEVFYEVKLTGASIIDVSSSYPHSISDNESMPYERVLLRYDSITVEHKLAGTSGYSIWDDRVY
>Mature_158_residues
SYMIYLTLNGEQQGLISAGCSSVESIGNRYQSGHEDQIQVLGLNHNITREQHVSHHPINFTKPIDKSSPLLTVSISNNEK
VTANFVFYRVNSSGQMEVFYEVKLTGASIIDVSSSYPHSISDNESMPYERVLLRYDSITVEHKLAGTSGYSIWDDRVY

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

Organism=Escherichia coli, GI1789850, Length=149, Percent_Identity=44.9664429530201, Blast_Score=119, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 17882; Mature: 17751

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYMIYLTLNGEQQGLISAGCSSVESIGNRYQSGHEDQIQVLGLNHNITREQHVSHHPIN
CCEEEEEEECCCCCCHHHHCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCC
FTKPIDKSSPLLTVSISNNEKVTANFVFYRVNSSGQMEVFYEVKLTGASIIDVSSSYPHS
CCCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCCEEEEEEEEECCCEEEEECCCCCCC
ISDNESMPYERVLLRYDSITVEHKLAGTSGYSIWDDRVY
CCCCCCCCHHHEEEEECCEEEEEEECCCCCCEEECCCCC
>Mature Secondary Structure 
SYMIYLTLNGEQQGLISAGCSSVESIGNRYQSGHEDQIQVLGLNHNITREQHVSHHPIN
CEEEEEEECCCCCCHHHHCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCC
FTKPIDKSSPLLTVSISNNEKVTANFVFYRVNSSGQMEVFYEVKLTGASIIDVSSSYPHS
CCCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCCEEEEEEEEECCCEEEEECCCCCCC
ISDNESMPYERVLLRYDSITVEHKLAGTSGYSIWDDRVY
CCCCCCCCHHHEEEEECCEEEEEEECCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]